Spacecraft can carry microbial contaminants from spacecraft assembly facilities (SAFs) to the cold arid surface of Mars that may confound life detection missions or disrupt native ecosystems. Dry hygroscopic sulphate and (per)chlorate salts on Mars may absorb atmospheric humidity and deliquesce at certain times to produce dense brines, potential sources of liquid water. Microbial growth is generally prohibited under the non-permissive condition of extremely low water activity in the frigid potential brines on Mars. Here we challenged the microbial community from samples of the Jet Propulsion Laboratory SAF with the extreme chemical conditions of brines relevant to Mars. Enrichment cultures in SP medium supplemented with 50% MgSO4 or 20% NaClO3 were inoculated from washes of SAF floor wipes. Samples were taken for each of the first four weeks and then at six months after inoculation to follow changes in the SAF microbial community under high salinity for long periods. Metagenomic DNA extracts of community samples were examined by Illumina sequencing of 18S rRNA gene sequences using fungal primers. The fungal assemblage during the first month of enrichment was predominantly common Ascomycetes, primarily Saccharomyete yeasts. Basidiomycetes were detected, mainly in the Microbotryomycetes and Tremellomycetes. Fungi were much less abundant in enrichment cultures at 50% MgSO4 than at 20% NaClO3. After 6 months of enrichment, few fungi remained. Microbes persisting from the JPL SAF microbial community in aged cultures enriched at extreme salinities might be the most capable of subsequently surviving and proliferating at the near surface of Mars. The SAF fungal assemblage did not survive and proliferate as well as the SAF bacterial community.

Although wildlife trade has received considerable research and conservation attention, much of it has been focused on charismatic species, with taxa such as fungi receiving little or no attention despite being highly sought after. The caterpillar fungus Ophiocordyceps sinensis is highly valued as an ingredient in cosmetics and medicines, and as an aphrodisiac and dietary supplement. Despite its livelihood and socio-economic significance, it has received little attention in either research or wildlife trade policy. Nevertheless, trade appears to be rampant, and growing online, and this is an emerging conservation challenge. Here we present a systematic survey of online trade in the caterpillar fungus during 2021. During this period, 168 advertisements were recorded on eight e-commerce platforms, both national and international. The grade of the caterpillar fungus advertised for sale fell into six categories. Fungi described as pure/organic/wild grade, which we categorized as authentic grade, had the highest median price (24 USD/g) and those described as medicine/food/cosmetic/beverage, which we categorized as consumption grade, had the lowest median price (0.04 USD/g). The highest advertised sale price was for caterpillar fungus of Bhutan origin (155 USD/g) advertised on the eBay e-commerce platform. Trade in caterpillar fungus on national and international online platforms is evident, and trade in other non-charismatic species is also likely burgeoning online but remains poorly documented. Further systematic surveys of online trade are required, not only to improve understanding of such trade but also to facilitate the development of effective conservation interventions and prevent undocumented overexploitation of important natural resources in developing countries.

Arthonia epipolytropa Hafellner & Grube and Arthonia subclemens Hafellner, Grube & Muggia are described as new to science. Both are specific parasites of Lecanora polytropa s. lat., but of differing pathogenicity and of very different appearance. Whereas the clearly parasitic Arthonia epipolytropa with its agglomerated ascomata is presently known with certainty from a number of localities along the arch of the Alps (Austria, Italy, Switzerland), other parts of Europe (Norway, Albania) and northern America (USA), the less harmful A. subclemens with its isolated sunken ascomata is currently known only from a small number of localities in the Eastern Alps (Austria, Italy) and various mountain ranges in southern Europe (Spain, North Macedonia, Greece). The species are compared with other Arthonia species known from Lecanora or one of its recently segregated genera. A key to the fungi regularly found on Lecanora polytropa s. lat. is presented.

Nest boxes have been used for many decades as tools for conservation and to study avian population dynamics. Plastic is increasingly used as a material for nest boxes, but no studies have investigated effects of this different material. Two consecutive studies were conducted to investigate effects of nest-box environment on nidicolous parasites, bacteria and fungi, as well as nest success, in blue tits Cyanistes caeruleus and great tits Parus major. The first compared microclimate and parasite and pathogen load in plastic and wooden nest boxes. The second tested the nest protection hypothesis – that birds naturally incorporate aromatic herbs into nests to decrease nest parasites and pathogens – by comparing parasite and pathogen load in plastic nest boxes to which aromatic or non-aromatic plant material was added. No significant difference in nest-box temperature or relative humidity was found between plastic and wooden boxes. Wooden boxes, however, contained 30-fold higher numbers of fleas and a higher total bacterial load on chicks. Fledging success for blue tit broods was significantly higher in wooden boxes. Parasites and bacteria did not decrease by the inclusion of aromatic herbs. The results increase the evidence base for nest-box design in support of plastic, which can provide an appropriate alternative nest-box material to wood, with apparently no difference in microclimate and no increase in the load of measured parasites and pathogens.

There is mounting evidence for the potential for the natural dietary antioxidant and anti-inflammatory amino acid l-Ergothioneine (ERGO) to prevent or mitigate chronic diseases of aging. This has led to the suggestion that it could be considered a ‘longevity vitamin.’ ERGO is produced in nature only by certain fungi and a few other microbes. Mushrooms are, by far, the leading dietary source of ERGO, but it is found in small amounts throughout the food chain, most likely due to soil-borne fungi passing it on to plants. Because some common agricultural practices can disrupt beneficial fungus–plant root relationships, ERGO levels in foods grown under those conditions could be compromised. Thus, research is needed to further analyse the role agricultural practices play in the availability of ERGO in the human diet and its potential to improve our long-term health.

Changed spatial configurations at sowing have been investigated as a strategy to minimize interspecific competition and improve the establishment and persistence of multi-species plantings in pastures, but the impact of this practice on the soil microbiome has received almost no previous research attention. Differences in populations of bacteria and fungi in the surface 10 cm of soil in the third year following pasture establishment were quantified using quantitative polymerase chain reaction and terminal restriction fragment length polymorphism methods. Populations were compared on, and between, drill rows sown to either the perennial grass phalaris (Phalaris aquatica L.), perennial legume lucerne (alfalfa; Medicago sativa L.) or the annual legume subterranean clover (Trifolium subterraneum L.). Results showed that soil microbial abundance and diversity were related to plant distribution across the field at the time of sampling and to soil chemical parameters including total carbon (C), mineral nitrogen (N), pH, and available phosphorus (P), potassium (K) and sulfur (S). Despite the 27-month lag since sowing, pasture species remained concentrated around the original drill row with very little colonization of the inter-row area. The abundance and diversity of bacterial and fungal populations were consistently greater under drill rows associated with higher total C concentrations in the surface soil compared with the inter-row areas. Our results showed that the pH and available nutrients were similar between the subterranean clover drill row and the inter-row, suggesting that soil microbial populations were not impacted directly by these soil fertility parameters, but rather were related to the presence or absence of plants. The abundance of bacteria and fungi were numerically lower under phalaris rows compared to rows sown to legumes. The richness and diversity of fungal populations were lowest between rows where lucerne was planted. Possible explanations for this observation include a lower C:N ratio of lucerne roots and/or a lack of fibrous roots at the soil surface compared to the other species, illustrating the influence of contrasting plant types on the soil microflora community. This study highlights the enduring legacy of the drill row on the spatial distribution of plants well into the pasture phase of a cropping rotation and discusses the opportunity to enhance the microbiome of cropping soils on a large scale during the pasture phase by increasing plant distribution across the landscape.

Mycotoxins are present in almost all feedstuffs used in animal nutrition but are often ignored in beef cattle systems, even though they can affect animal performance. The objective of this study was to evaluate the effects of mycotoxins and a mycotoxin adsorbent (ADS) on performance of Nellore cattle finished in a feedlot. One hundred Nellore cattle (430 ± 13 kg) were used in a randomized complete block design with a 2 × 2 factorial arrangement of treatments. The factors consisted of two diets with either natural contamination (NC) or exogenous contamination (EC) and the presence (1 g/kg of DM; ADS) or absence of a mycotoxin adsorbent. The NC and EC diets had the following contaminations, respectively: 0.00 and 10.0 µg/kg aflatoxins, 5114 and 5754 µg/kg fumonisins, 0.00 and 42.1 µg/kg trichothecenes B, 0.00 and 22.1 µg/kg trichothecenes A and 42.9 and 42.9 µg/kg fusaric acid. At the beginning of the experiment, all animals were weighed, and four randomly selected animals were slaughtered to evaluate the initial carcass weight. After 97 days of treatment, all animals were weighed and slaughtered. There was no interaction among factors for the DM intake (DMI; P = 0.92); however, there was a tendency for the EC diets to decrease the DMI by 650 g/day compared to animals fed NC diets (P = 0.09). There was a trend for interaction among factors (P = 0.08) for the average daily gain (ADG), where the greatest ADG was observed for cattle fed the NC diet (1.77 kg), and the lowest was observed for those fed the EC diet (1.51 kg). The NC + ADS and EC + ADS treatments presented intermediate values for ADG. The animals fed the NC diet had a greater final BW (596 kg) than animals fed the EC treatment (582 kg; P = 0.04). There was a tendency for interaction among factors for carcass gain (P = 0.08). Similarly to ADG, the highest carcass gain was observed for animals fed the NC diet (1.20 kg), and the lowest was observed for those fed the EC diet (1.05 kg). The NC + ADS and EC + ADS treatments presented intermediate values. The natural contamination groups had greater carcass gain than that of the EC groups, and the use of the ADS recovered part of the weight gain in animals fed the EC diet. In conclusion, mycotoxins at the levels evaluated affected the performance of beef cattle, and adsorbents may mitigate their impact.

We analyzed the effects of growth of Penicillium commune, one of the most frequent fungal species associated with cheese, on the water diffusion and texture of hard and extra-hard cheeses. A total of 36 hard cheese blocks and 36 extra-hard cheese blocks were manufactured, salted at different levels (0.5, 1.25 and 2% w/w), and assigned to different treatments (control and inoculated). Cheese texture was analyzed using a penetration needle probe at 2 and 5 weeks after ripening. Firmness, defined as the maximum force detected in the penetration probe, was higher in both hard and extra-hard inoculated cheese blocks compared with the control. In addition, the presence of fungal growth on cheese rind increased the total work of penetration (a measure of resistance to probe penetration), but only in extra-hard cheeses, suggesting that the moisture of cheese might be affecting the growth capacities and performance of P. commune. The change in textural properties of cheeses was linked to desiccation of the upper 0.5-cm rind layer mediated by P. commune.

Investigation of parasites and diseases affecting molluscs of ecological and economic interest is critical for the management of native stocks and aquaculture. In recent years, much attention has been devoted to investigating the World Organisation for Animal Health listed infectious diseases, so that communities can be prepared to attend public health emergencies and avoid severe income losses. In this context, the health status of Mytilus galloprovincialis Lamarck, 1819 was analysed in two aquaculture sites (Strunjan Bay and Piran Bay, Slovenia), and in four natural mussel beds (Adriatic Croatia International Marinas Pula and Rovinj and St Catherine, Croatia; Marina Koper, Slovenia) along the coast of the northern Adriatic Sea. The mussels were sampled in February and April 2014, and processed for histological examination of several endosymbionts and pathogens that frequently occur in mytilid mussels. Endosymbionts and pathogens were not detected in farmed mussels. Prokaryotic inclusion bodies, the protozoan Nematopsis, Ancistrocoma-like ciliates, haplosporidian-like plasmodia, turbellarian Urastoma cyprinae, and basophilic inclusion bodies were observed in digestive gland cryosections of wild mussels from the coastal region of the northern Adriatic. Fungal spores of Psilocybe sp., Ulocladium sp. and Alternaria sp. were detected between the digestive tubules based on their morphology. Diagnostic PCR did not reveal infection with Marteilia refringens during the studied period, neither in wild nor farmed mussels. We confirmed the site effects on prevalence of infected mussels. Thus, we can conclude that wild areas are more exposed to endobionts and parasites than aquaculture sites.

In the Earth’s lithosphere, fungi are of fundamental importance as decomposer organisms, animal and plant pathogens and symbionts (e.g. lichens and mycorrhizas), being ubiquitous in sub-aerial and subsoil environments. The ability of fungi to interact with minerals, metals, metalloids and organic compounds through biomechanical and biochemical processes, makes them ideally suited as biological weathering agents of rock and building stone. They also play a fundamental role in biogeochemical cycling of nutrients, (e.g. C, N, P and S) and metals (e.g. Na, Mg, Ca, Mn, Fe, Cu, Zn, Co and Ni) essential for the growth of living organisms in the biosphere. In addition they play an integral role in the mobilization and immobilization of non-essential metals (e.g. Cs, Al, Cd, Hg and Pb). Most studies on mineral-microbe interactions and microbial involvement in geological processes have concentrated on bacteria and archaea (Prokaryota): fungi (Eukaryota) have, to a certain extent, been neglected. This article addresses the role of fungi in geomicrobiological processes, emphasizing their deteriorative potential on rock, building stone and mineral surfaces and involvement in the formation of secondary mycogenic minerals. Such roles of fungi are also of importance for the global carbon reservoir and have potential biotechnological applications, e.g. in the bioremediation of xenobiotic-, metal- and/or radionuclide-contaminated soils and wastes, and metal/radionuclide recovery.

Laboratory experiments were conducted to determine the fate of 14C-EPTC in a soil that had a history of vernolate application and exhibited accelerated degradation of carbamothioate herbicides compared to nonhistory soil. A very rapid mineralization of the herbicide to 14CO2 was evident in history soil, compared to nonhistory soil. The two soils did not differ in the amounts of the EPTC lost through volatilization or in the nonextractable radioactive fractions. Except for small quantities of EPTC-sulfoxide and sulfone, no other metabolites were detected. Degradation of 14C-EPTC, as determined by evolution of 14CO2 in history soil, was drastically inhibited following soil sterilization by means of autoclaving or gamma irradiation. Soil disinfestation by solarization, methyl bromide, or metham had a pronounced inhibitory effect during the first 6 days, but was less effective than sterilization. Treatment of a history soil with the fungicide 2-methoxyethylmercury chloride and dietholate strongly inhibited EPTC degradation, while thiram and fentin acetate had only short lasting effects. Cycloheximide, an antifungal antibiotic, had little effect on the degradation of EPTC while chloramphenicol, an antibacterial antibiotic, inhibited the herbicide degradation. These results indicate that accelerated degradation of EPTC is linked to the activity of soil microorganisms, e.g. bacteria, and can be controlled by sterilization and chemical treatments.

Sodium alginate was used to prepare pelletized formulations for each of five fungi. Aqueous mixtures of 1.0% (w/v) sodium alginate and homogenized mycelia of Alternaria cassiae Jurair & Khan, Alternaria macrospora Zimm., Fusarium lateritium Nees ex Fr., Colletotrichum malvarum (A. Braun & Casp.) Southworth, or a Phyllosticta sp. were pelletized by dropwise additions of each mycelial-alginate mixture into 0.25 M CaCl2. Abundant conidia were produced on the pellets 24 to 48 h after the pellets were spread into trays and exposed 10 min/12 h to 275-W sunlamps. These conidia germinated readily (90 to 100%) and readily infected the respective host plants. Each liter of mycelium plus growth medium from submerged liquid cultures produced 4 L of the mycelial-alginate mixture. Each liter of the mycelial-alginate mixture produced approximately 18 g of air-dried formulation. When 10% (w/v) clay was incorporated into the pellets, each liter of the mycelial-alginate mixture produced approximately 118 g of air-dried formulation. The pelletized fungi sporulated readily following storage at 4 or 25 C for 6 to 8 months. This method of pelletization is potentially useful for the formulation of inoculum of fungi used as mycoherbicides, for the mass production of pycnidium-forming fungi, and for the production of inoculum for host-plant resistance studies.

Metabolites from 906 microbial isolates were evaluated for herbicidal properties. These included 266 isolates of Streptomyces, 502 isolates of non-Streptomyces actinomycetes representing 18 genera, 28 unidentified aerobic actinomycetes, 70 fungi, and 40 isolates of eubacteria. Metabolites from 72 isolates significantly inhibited germination of cress seeds. In terms of generic specificity and frequency, about 18% of all the Streptomyces and Nocardiopsis isolates and 13% of Actinoplanes isolates were toxic to cress (Lepidium sativum L.) seeds. Among other inhibitors were three isolates of Actinomadura and one isolate each of Micromonospora, Micropolyspora, Strep to sporangium, Streptoverticillium, and Bacillus, and two isolates of unidentified actinomycetes. The toxigenic fungi included two isolates of Penicillium and one isolate each of Aspergillus, Scopulariopsis, and Paecilomyces species. About half the isolates toxic to cress were toxic to barnyardgrass (Echinochloa crus-galli L. Beauv. # ECHCG) seeds. of the isolates found effective in the secondary screening on the potted weeds, eight belonged to the genus Streptomyces and one was identified as Scopulariopsis brumptii. None of the examined isolates of Rhodococcus, Nocardia, Oerskovia, Thermoactinomyces, Thermomonospora, and six other genera of actinomycetes showed any appreciable toxicity to the seeds of either species.

Surface and subsurface soils are complex biological, chemical, and physical environments and to understand the fate of pesticides in the soil environment is a formidable task. To determine the environmental fate of pesticides requires a diverse array of techniques and procedures. Microbiological approaches range from applied to basic, laboratory to field, qualitative to quantitative, and from low to high technology. In the arena of biodegradation, teams of scientists are needed to develop predictive models for the behavior of pesticides in the soil environment. From our perspectives, we have documented the existing status of the microbiology of environmental fate studies with pesticides. Verification of data from laboratory studies to the field environment is needed. On the other hand, efforts to design better field studies to assess microbial processes are essential to advance our understanding of environmental fate studies with pesticides.

A hammer mill removed most of the lemmas, paleas, and pericarps from cheat florets. Typically, the cuticular layer of the testa was the only remaining intact layer, and damage to the embryos and endosperm was severe. A roller mill disrupted tissue organization of lemmas, paleas, and outer layers of the caryopses primarily at the cuts. Large gaps between the aleurone layer and testa, between testa and pericarp, and between the scutellum and endosperm were created. In the field, germination of mill-damaged florets was reduced, and florets exhibited progressive degradation the longer they were buried. Nematodes and fungi penetrated the cuticular layer of mill-damaged seed. Attaching a hammer mill or a roller mill to a grain combine to treat cheat seed before it is returned to the field could provide a novel method of cheat control.

It has been proposed that cropping systems can be managed to promote the development of soil microbial communities that accelerate weed seed mortality. We examined soil fungal and bacterial communities, soil C:N ratio, soil particle size fractions, and weed seed mortality in soil from fields with over 10 yr of five contrasting management histories with the objective of determining if seed mortality could be explained by differences in soil properties. Seed mortality of giant foxtail and velvetleaf were greatest in soil from the conventionally managed systems and lowest in soil from a reduced input system. Principal-components analysis of soil microbial communities, as determined through denaturing gradient gel electrophoresis of polymerase chain reaction–amplified ribosomal RNA genes (PCR-DGGE), showed distinct differences in the composition of fungal and bacterial communities among the study soils. The first principal component of the 18S rDNA PCR-DGGE analysis of fungal community composition showed a strong negative correlation with both giant foxtail (− 0.52, P < 0.05) and velvetleaf (− 0.57, P < 0.01) seed mortality, as did ordination with nonmetric multidimensional scaling (NMS) [giant foxtail (− 0.54, P < 0.01) and velvetleaf (− 0.60, P < 0.01)], suggesting that seeds of the two species were affected similarly by changes in the soil fungal community. For giant foxtail, weed seed mortality was also positively correlated (r = 0.48, P < 0.05) with the first NMS axis of the bacterial 16S rDNA analysis. None of the other measured soil properties were significantly correlated with weed seed mortality. Thus, for the soils tested here, management history, microbial community composition, and weed seed mortality were linked. To extend these results to the field, more work is needed to identify components of the fungal and bacterial communities that are active in seed degradation, and to develop conservation biocontrol recommendations for these species.

Microstegium vimineum is a widespread invasive grass that poses significant threats to forests and disturbed areas throughout the United States. Often, the large-scale, rapid spread of Microstegium prohibits management by traditional methods. Control of Microstegium may be possible through the use of a pathogen (referred to here as Bipolaris Mv) that causes leaf blight on Microstegium. Members of the fungal genus Bipolaris are known pathogens of many plants, including important agronomic crops. However, little is known about the biology and host range of Bipolaris Mv. We used a series of growth chamber and light bank experiments to determine the variation in Bipolaris Mv from different geographic origins and its ability to cause foliar lesions and chlorosis on Microstegium. We used petri plate and soil infestation assays to determine the effects of Bipolaris Mv on Microstegium emergence from seed, biomass, and root necrosis. Finally, we tested the host range of these fungi on economically and ecologically important plant species. All isolates increased disease on Microstegium foliage relative to controls, although the effects varied among isolates. Isolates increased root necrosis by 97% in petri plate assays and by 4% in soil infestation trials compared to controls. Infestation of soils with Bipolaris Mv reduced emergence of Microstegium from seed by 31% compared to controls, but did not affect root or stand biomass. Bipolaris Mv produced lesions on a range of grasses, including corn, sorghum, rye, and wheat, although lesion size varied with isolate. These results indicate that Bipolaris Mv may be an effective pathogen on Microstegium, but its use as a bioherbicide may be impractical because of its effects on a wide range of grasses.