Individual trophic specialization (ITS) refers to the trophic diversification amongst individuals within a population. The gentoo penguin (Pygoscelis papua) is considered a trophic generalist at the population level, but little is known about its individual trophic differentiation. We assessed the degree of ITS at one of its main breeding colonies: Ardley Island, South Shetland Islands. We used skin from 19 dead individuals to determine species and sex by molecular methods and a nail for stable isotope analysis of δ15N and δ13C. Isotopic niche metrics and ITS were estimated for the population and for each sex. We found a moderately high degree of ITS associated with the trophic position of the resources consumed (δ15N) for the population and both sexes, as well as a moderate degree of ITS in the foraging habitat (δ13C) for the population and females. Females showed a higher exclusive niche area, suggesting that they use resources and foraging areas that males do not, probably related to reproductive energy demands. Given the high population density of this species, ITS could function as a mechanism to decrease intraspecific competition. This combination of genetic and isotopic tools allowed us to provide relevant information on the trophic ecology of the gentoo penguin without manipulating animals or using invasive methods.

Shortfin mako shark, Isurus oxyrinchus, is listed as an endangered species with declining global population. Thus, studies regarding its biology and ecology are important to recommend fishery management and conservation measures. This study aimed to determine the diet composition and feeding habits of I. oxyrinchus in Ecuadorian waters. Samples were obtained from Santa Rosa fishing port (Ecuador). The total length (LT), sex and sexual characteristics were recorded, and stomach contents were collected. A total of 142 individuals were recorded, comprising 81 females (104–295 cm LT) and 61 males (127–245 cm LT). A total of 24 prey species were identified, including crustaceans, cephalopods, teleosts and cetaceans. According to the Prey-Specific Index of Relative Importance (PSIRI), the main prey taxa were the ommastrephid squid, Dosidicus gigas (42.57%) and Sthenoteuthis oualaniensis (21.04%), followed by fish from the family Hemiramphidae (11.85%). Isurus oxyrinchus is a specialist predator that preferred a low number of prey (Bi = 0.25), both by sex (Bi; females = 0.29 and males = 0.34) and life stages (Bi; juveniles = 0.27 and adults = 0.37). The trophic overlap was medium for sexes (J = 0.54) and biological cycle phases (J = 0.42). Trophic level (TLk) was 4.47, indicating that I. oxyrinchus is a tertiary predator. This information will help in fisheries management based on an ecosystem approach, where this species fulfils an ecological role, and its interactions with other species allow us to understand how the flow of nutrients and energy occurs within an ecosystem.

The shape (derived from landmark-based geometric morphometrics), condition (Fulton index) and diet (determined through gut content analysis) were described for the pike icefish Champsocephalus esox (Channichthyidae) from Última Esperanza sound, south-west Patagonia, Chile. Based on the length-weight relationship, females were heavier at length than males. Nevertheless, the Fulton index was similar between males and females. The morphospace of C. esox showed high intraspecific variability in the dorsoventral position of the tip of the snout, anus and the ventral insertion of the pectoral fin, as well as the anteroposterior position of the premaxilla, opercle and anus. This indicates the existence of phenotypic plasticity, leading to specimens with larger jaws and heads but shorter trunks, or specimens with shorter jaws and heads but larger trunks. This phenotypic plasticity was independent of size and sex. The feeding incidence was similar between sexes (34.1% and 47.2% for males and females, respectively). Diets consisted of only fish, small notothenioids of the genus Patagonotothen (P. tessellata, P. cornucola and P. sima), showing similarities between males and females. Finally, C. esox is the second notothenioid species, and the first outside of Antarctica, to display phenotypic plasticity in its body shape.

In Antarctica, amphipods form a highly diverse group, occupy many different ecological niches and hold an important place in food webs. Here, we aimed to test whether differences in Antarctic amphipod feeding habits were reflected in their mandible morphology, and if mouthpart specialization could be used to describe amphipod trophic ecology. To do so, we compared mandible morphology in nine species spanning seven families and five functional groups (grazers, suspension feeders, generalist predators, specialist predators and scavengers). Mandible morphology adequately depicted some aspects of amphipod trophic ecology, such as the trophic level at which animals feed or their degree of dietary specialization. On the other hand, links between mandible morphology and amphipod diet were seldom unambiguous or straightforward. Similar adaptations were found in distinct functional groups. Conversely, mandible morphology could vary within a single functional group, and phylogenetic effects sometimes complicated the interpretation of form-function relationships. Overall, mandible morphology on its own was generally not sufficient to precisely predict amphipod feeding strategies. However, when combined with other methods (e.g. gut contents, trophic markers), it constitutes a valuable source of information for integrative studies of amphipod ecological diversity in the Southern Ocean.

Resource partitioning is important for species coexistence. Species with similar ecomorphological characters have a high potential for competition, especially when close phylogenetically. The diet and resource partitioning of four snappers (Lutjanus alexandrei, L. analis, L. jocu and L. synagris) was studied in the Tubarão River, north-eastern Brazil, between March and November 2012. Specimens were caught using a beach seine, and a total of 731 stomachs were analysed. The highest abundance of snappers was found near to vegetated habitats in the middle estuary. Crustaceans were dominant in the diet of all four species, being found in over 90% of the stomachs, followed by fish and molluscs. The species did not appear to compete for common resources, probably because there was not always spatial overlap, and differences in the proportions of consumption of items were observed. Ontogenetic comparisons of dietary compositions suggested differences among species, with changes in the diet related to changes in the mouth area as the body size increased. The changes were more evident in L. analis and L. synagris where microcrustaceans (Calanoida, Cyclopoida and Amphipoda) were dominant in the diet of the smaller size classes, and benthic crustaceans (Brachyura) and fish in the diet of larger individuals. The intra- and inter-specific differences in the dietary compositions, differences in the mouth area and feeding strategy contribute to allow the co-existence of these snappers in the study area.

The aim of this study was to test the effective separation of shape indices of otoliths of three species belonging to the family Sciaenidae before and after in vitro digestion. We measured 328 sagittal otoliths and applied six shape indices. Before the experiment, the aspect ratio (otolith height/otolith length%), circularity, ellipticity and relative surface of the sulcus acusticus were suitable for differentiating the species of genera Paralonchurus and Stellifer. Among the species of Stellifer, the aspect ratio and rectangularity were suitable. Otoliths exposed to in vitro digestion showed no significant differences in their morphometry before and after the experiment. After in vitro digestion, the aspect ratio and circularity were effective in separating Paralonchurus and Stellifer. However, none of the indices used in the present study were efficient to separate otoliths of congeneric species after in vitro digestion.

Cold-water coral reefs are biodiversity hotspots of the deep sea. The most dominant reef-building cold-water coral in the Atlantic is Lophelia pertusa, which builds vast and structurally complex habitats. Studying the behaviours of deep-sea species is challenging due to the technological difficulties in making prolonged observations in situ, so little is known about the behavioural ecology of this important species. Observations in laboratory studies can help to enhance our understanding of the range of behaviours these species exhibit. Here we present video evidence that the cold-water coral Lophelia pertusa is capable of producing mucus nets as part of their feeding strategy. This finding suggests that L. pertusa has a more diverse range of feeding strategies than previously thought.

Where two species occupy the same habitat and similar niches, competition is likely to drive small-scale spatial niche separation or resource partitioning that may not be immediately apparent. A stable isotope approach was used to investigate potential trophic niche separation between co-existing rocky shore crabs in the North-West (NW) Arabian Gulf. Leptodius exaratus and Pilumnopeus convexus which occupy similar shore height on the same rocky intertidal habitats. We also investigated conspecific differences between males vs females and adults vs juveniles. δ15N results indicated that adults of both species occupy a high trophic level in the rocky shore community, suggesting similar functional roles and potential for competition for food resources, while significant differences in δ13C values indicated differences in dietary sources between the two species, and also changes in diet between juveniles and adults in both species. MixSIAR analysis of δ15N and δ13C data confirmed field observations that both species are generalist omnivores, with potential for direct competition including adult predation on juveniles, including conspecifics. Differentiation in isotopic niches (SIBER analysis) was mainly driven by the significant differences in δ13C values, suggesting that co-existence of the two crab species is at least in part mediated by trophic niche separation or dietary resource partitioning, with some (unquantified) potential for spatial resource partitioning at the microhabitat level.

Understanding the diet of marine predators is essential to defining their trophic role in an ecosystem. Elasmobranchs (sharks and batoids) are considered pivotal components of marine food webs, and are often included in the top predator or mesopredator groups. However, in comparison with other Mediterranean areas, research focusing on marine predators inhabiting the Levantine Sea (eastern Mediterranean Sea) is very limited. Here, we examined the feeding habits (diet, trophic width and trophic position) of three endangered batoids (Gymnura altavela (Linnaeus, 1758), Raja asterias Delaroche, 1809 and Raja clavata, Linnaeus, 1758) coexisting in Iskenderun Bay (north-eastern Levantine Sea, Mediterranean Basin) by combining stomach content and stable isotope analyses. The results revealed clear differences in the trophic habits between them. Stomach contents showed differences in the diet between species, showing a clear feeding preference for teleosts in the case of G. altavela and a diet composed of fish and crustaceans in the case of R. asterias and R. clavata. In line with stomach content results, interspecific differences in the isotopic values and trophic levels were found. In particular, G. altavela was isotopically segregated from R. asterias and R. clavata, showing lower isotopic trophic width and higher trophic level. The results of this study provide new insights into the ecological role of these three endangered batoid species in the Levantine Sea and are of crucial importance for management and conservation of these species.

The ommastrephid squid, Illex coindetii, is one of the most abundant cephalopods in the Mediterranean Sea and an important predator in the ecosystem. In the present study, we examined the diet habits of I. coindetii in the north-western Mediterranean Sea by combining two complementary approaches: stomach content and stable isotopic analyses. Specifically, we examined whether the diet differed between sizes and seasons. Stomach content results indicated that the diet of I. coindetii was composed of 35 prey items including four major groups; namely the crustaceans Pasiphaea sivado, Amphipods, squid of the Order Teuthida, and pelagic and mesopelagic fish. Differences were found among different ontogenetic sizes: juvenile individuals fed mainly on crustaceans (%IRI = 77.59), whereas adult individuals fed on a wider range of prey items, including the shrimp P. sivado (%IRI = 33.21), the amphipod Anchylomera blossevillei (%IRI = 0.91), the decapod Plesionika sp. (%IRI = 0.19), the carangid Trachurus trachurus (%IRI = 0.34) and some Myctophids species (%IRI = 0.21). Differences were also found between seasons in the year. In winter, crustaceans were the main prey items, whereas in summer the diversity of prey was higher, including fish, crustaceans and molluscs. Similar to the stomach contents, stable isotopic results indicated differences among sizes. δ15N values were higher in adult squids than in juveniles because they fed on prey at higher trophic levels. In conclusion, this study indicates that feeding habits of I. coindetii vary seasonally and ontogenetically. These feeding variations may be associated with trophic competence scenarios based on size, and also with the availability and abundance of prey throughout the year.

Aglajidae is a family of tropical and temperate marine Cephalaspidea gastropod slugs regarded as active predators. In order to better understand their food habits and trophic interactions, we have studied the diet of all genera through the examination of gut contents. Specimens were dissected for the digestive tract and gut contents were removed and identified by optical and scanning electron microscopy. Our results confirmed that carnivory is the only feeding mode in aglajids and showed a sharp preference for vagile prey (94% of food items). We suggest that the interaction between crawling speed, presence of sensorial structures capable of detecting chemical signals from prey, and unique features of the digestive system (e.g. lack of radula, eversion of the buccal bulb, thickening of gizzard walls) led aglajid slugs to occupy a unique trophic niche among cephalaspideans, supporting the hypothesis that dietary specialization played a major role in the adaptive radiation of Cephalaspidea gastropods.

Niche differentiation is the process by which species evolve different forms of resource use, and is used to explain the co-occurrence in a variety of habitats. The Bayesian framework of isotopic niche through quantitative niche metrics was applied to estimate and compare the niche breadth of two sympatric coastal dolphins Pontoporia blainvillei and Sotalia guianensis in a tropical marine area. The standard ellipse areas (SEAs) based on species were quite similar, but the SEAs based on age class showed that the matures’ niche space is larger than the immatures’ for both dolphins. A probabilistic comparison of SEAs indicated that specific differences are negligible compared with age class differences. Trophic level measures (δ15N range) indicated that the dolphins are comparable as top predators, and that immature specimens have a lower range of trophic levels than mature ones. In terms of variability of food sources (δ13C range), S. guianensis showed a larger value than P. blainvillei and mature specimens had larger δ13C range than immatures for both species. In general, P. blainvillei and S. guianensis were similar in the niche metrics, with SEAs overlap of 52.1 and 39.7%. The immature specimens showed reduced isotopic niche overlap between species (<3%). In conclusion, Pontoporia blainvillei and S. guianensis specimens have similar isotopic niches, but pronounced differences between immature and mature specimens, both intraspecific and interspecific. Isotopic niche and quantitative metrics along with previous data on stomach contents provide a strong representation of species niche and their relationships.

Dolphinfish (Mahimahi) are a high-demand resource for sport and coastal fisheries, mainly in the Pacific Ocean. Due to their economic and ecological importance, studies of their biology are very important to understand their function in ecosystems. We used stable isotope and stomach content analyses to determine the most important prey of the common dolphinfish, as well as the trophic level of this species in two areas of the southern Gulf of California. Stomach contents of 445 specimens were analysed. Using both techniques, we found that the most important prey for dolphinfish in the southern Gulf of California were three invertebrate species followed by fish. This contrasts with results from other authors who found that this species was mainly piscivorous in other locations. Stomach content analysis indicated differences in prey biomass by area, season and size class. The isotopic analysis did not show significant differences between seasons or sexes. Both stomach contents and stable isotope analyses showed that although this predator consumed a wide prey spectrum, only a few prey items made up the bulk of the diet, which resulted in a low SD in δ15N values and low Levin's index values. We conclude that this fish is an opportunistic predator that may consume a wide prey spectrum, but that it mainly consumes prey that are abundant in the area, such as crustaceans and cephalopods in the Gulf of California.

The feeding biology of bahia sprat (Rhinosardinia bahiensis) was studied in two habitats of a tropical semi-arid estuary, on the north-eastern Brazilian coast. Samplings were collected on a monthly basis (January 2010–February 2011), and fish were caught during the day using an 8 m beach seine. Habitat use was size-dependent, with tidal mudflat occupied by higher size-classes than tidal creeks, which were occupied by smaller conspecifics. The diet analysis of different size-classes revealed that all sizes of fish consumed similar taxa (Calanoida, Cyclopoida and Decapoda larvae), and that the relative proportion of taxa consumed reflected fish size. Dietary differences between the two nursery areas mainly reflected prey availability. Although high diet overlap was only found between some size-classes in tidal mudflat, these results seem to demonstrate a strategy for efficient use of space potential; intraspecific competition was probably minimized by a differential habitat use patterns.

Through application of carbon (C) and nitrogen (N) stable isotope analyses, we investigated the benthic trophic structure of the upper-slope off southern Chile (~45°S) including a recent methane seep area discovered as part of this study. The observed fauna comprised 53 invertebrates and seven fish taxa, including remains of chemosymbiotic fauna (e.g. chemosymbiotic bivalves and siboglinid polychaetes), which are typical of methane seep environments. While in close-proximity to a seep, the heterotrophic fauna had a nutrition derived predominantly from photosynthetic sources (δ13C > –21‰). The absence of chemosynthesis-based nutrition in the consumers was likely a result of using an Agassiz trawl to sample the benthos, a method that is likely to collect a mix of fauna including individuals from adjacent non-seep bathyal environments. While four trophic levels were estimated for invertebrates, the fish assemblage was positioned within the third trophic level of the food web. Differences in corrected standard ellipse area (SEAC), which is a proxy of the isotopic niche width, yielded differences for the demersal fish Notophycis marginata (SEAC = 5.1‰) and Coelorinchus fasciatus (SEAC = 1.1‰), suggesting distinct trophic behaviours. No ontogenic changes were detected in C. fasciatus regarding food sources and trophic position. The present study contributes the first basic trophic data for the bathyal area off southern Chile, including the identification of a new methane seep area, among the furthest south ever discovered. Such information provides the basis for the proper sustainable management of the benthic environments present along the vast Chilean continental margin.

This study details the feeding ecology of arrow squid, Nototodarus gouldi, collected opportunistically from trawlers in waters south-east off Australia in 2007 and 2008. Combined stomach content and fatty acid (FA) signature analyses provided clear evidence of seasonal dietary shifts in prey composition. Teleost fish remains (mainly otoliths) were found in 67% of stomachs with the two mesopelagic planktivorous fish, Lampanyctodes hectoris and Maurolicus muelleri dominating. Cephalopods and crustaceans were supplementary dietary components, with an increased representation in the diet over winter. Digestive gland lipid content was moderate (16.4 ± 8.4% wet weight) and was rich in triacylglycerol and monounsaturated fatty acids. Multivariate analysis of FA profiles grouped arrow squid with profiles of mesopelagic fish and cephalopods, thus supporting the findings of stomach content analysis. Seasonal differences in total lipid content were likely related to summer upwelling events and local changes in productivity, while intraspecific differences in lipid class and FA composition were related to seasonal differences of prey consumption. FA analyses also demonstrated dietary differences associated with gender, size and female maturation. Such relationships demonstrate that the diet of N. gouldi is closely linked to prey size, abundance and availability and possibly also, to key life-history stages.

Trophically transmitted parasites are likely to strongly influence food web-structure. The extent to which they change the trophic ecology of their host remains nevertheless poorly investigated and field evidence is lacking. This is particularly true for acanthocephalan parasites whose invertebrate hosts can prey on other invertebrates and contribute to leaf-litter breakdown. We used a multiple approach combining feeding experiments, neutral lipids and stable isotopes to investigate the trophic ecology of the freshwater amphipod Gammarus roeseli parasitized by the bird acanthocephalan Polymorphus minutus. Infected compared to uninfected amphipods consumed as many dead isopods, but fewer live isopods and less leaf material. Infection had no influence on the total concentration of neutral lipids. Contrary to what we expected based on laboratory findings, the nitrogen isotope signature, which allows for the estimation of consumer's trophic position, was not influenced by infection status. Conversely, the carbon isotope signature, which is used to identify food sources, changed with infection and suggested that the diet of infected G. roeseli includes less perilithon (i.e. fixed algae on rocks, stones) but more terrestrial inputs (e.g. leaf material) than that of uninfected conspecifics. This study shows evidence of changes in the trophic ecology of P. minutus-infected G. roeseli and we stress the need to complement feeding experiments with field data when investigating top-down effects of infection in an opportunistic feeder which adapts its diet to the available food sources.

Ontogenetic diet changes (prey species richness and size) in juveniles of white sea catfish (Genidens barbus) were tested in three southern Brazilian estuaries: Mampituba (29°12′S), Tramandaí (30°02′S), Chuí (33°44′S). Cluster analysis revealed that white sea catfish juvenile populations in the three estuaries are composed of two feeding groups. These two feeding groups are coincident with a bimodal size–age distribution of the juveniles of white sea catfish. In small catfish (5 to 10 cm TL) copepods were the most numerous prey (Chuí = 86.66%N, Tramandaí = 85.52%N and Mampituba = 52.34%N). In large catfish (10 to 20 cm TL) the most abundant and frequent prey was fish (Chuí: 73.19%N and 74.56%FO; Tramandaí: 85.92%N and 73.33%FO; Mampituba: 52.34%N and 61.54%FO). The Morisita overlap index among small and large fish was low in all estuaries; high values of Morisita's similarity index were observed among same size catfish groups. In all cases, no differences were observed among prey bio-volume curves of same size predator groups (small, F = 0.41, P = 0.65; large, F = 2.19, P = 0.11). In all estuaries, prey size increased significantly with increasing predator size. The 90th regression quantile estimated with most precision the predator–prey size relationship.

Age and diet of 140 brown phase early juvenile Notothenia rossii specimens caught at Potter Cove from December 2005–March 2006 were studied. Fish were immature, in the range 8.5–21 cm TL and of age groups 1–2 (otolith/scale readings). The diet (F% and coefficient Q methods) was mainly benthic-demersal organisms with Gammaridean amphipods (primarily Gondogeneia antarctica) as the most frequent (F% = 98) and main prey (Q% = 97). The occurrence of algae, gastropods and harpacticoid copepods was high, but these organisms were secondary or occasional food. The importance of other benthic (bivalves, polychaetes, isopods) and pelagic (ostracods, calanoids, hyperiid amphipods, krill) prey was very low. Preference of larger fish for larger prey was evident. Stomach fullness analysis showed high food availability during the sampling period. Young stages of N. rossii are demersal, preying mainly on gammarideans and other invertebrates of the benthic community associated with macroalgae beds. The almost complete lack of plankton components in the diet of early juvenile fish suggests they do not migrate vertically to feed.

Ontogenetic and seasonal variation in diet was examined for 11 species of insectivorous forest-floor frogs and lizards from a lowland wet forest in north-eastern Costa Rica. Specimens were collected systematically over an entire seasonal cycle and represented individuals of all sizes. Individual prey items were removed from stomachs of preserved specimens, measured and identified. Ontogenetic shifts in prey size were pervasive. Ontogenetic shifts in prey composition were limited to four species; these were not the species with greatest range in body size, nor the species with the broadest diets. Small prey types (ants, mites, collembolans) decreased in representation and large prey types (roaches, orthopterans, millipedes) increased in importance over ontogeny; this could be because prey selection is based primarily on prey size or because of different prey preferences among age classes. There is little evidence for size-structure in this assemblage. There is no evidence that total availability of arthropod prey varies among seasons, but some evidence that preferred prey are less common in the wet season. Diet was similar between lizards and frogs. Lizards were more likely to have empty stomachs, but also greater stomach volume, than frogs; this indicates a difference in food-gathering strategies. Our study indicates strong similarity between frogs and lizards in diet despite enormous differences in physiology and behaviour.