In the tropics, limestone caves in karstic areas are known for their unique biodiversity. However, many caves remain unstudied and little is known about underlying gradients that determine diversity and biomass in aquatic microhabitats. Here, we sampled zooplankton and benthos in a set of 12 aquatic caves, locally called closed cenotes in Yucatán, Mexico. Our aim was to explain diversity patterns and differences in biomass with particular attention for correlations between bat colony characteristics and other biota. Compared with caves that support photosynthesis, diversity was low with an average of four planktonic and two benthic species in these dark caves. Undetectable phosphorus concentrations in the water suggest this nutrient is limiting. Several associations hint at a potential link between bat abundance and functional guild composition, water quality and aquatic biota. As such, more bats were linked to higher nitrate concentrations. Yet this was not translated to higher invertebrate biomass, probably since phosphorus is limiting. Overall, the trends found in this survey suggest that bats could be important as fertilizers of the caves although mechanistic links that mediate the flux of nutrients need to be confirmed experimentally.

We studied the vegetation and soil properties of a dry forest that had once been disturbed in central Myanmar using 30 quadrats (20 × 20 m) established in 2012. For 30 species, the overall density was 706 individuals ha−1, and the basal area was 2.92 m2 ha−1. The forest was a mosaic of six community types, each of which was dominated by a single species. Dominant species that were capable of resprouting accounted for 47–78% of the total density and 56–83% of the basal area of the communities. We related seven soil properties to the vegetation patterns using canonical correspondence analysis (CCA). The CCA results highlighted remarkable associations of species such as Acacia catechu, Dalbergia paniculata, Terminalia oliveri and Millettia multiflora with soil texture. Acacia inopinata was associated with a high soil pH (i.e. 9–10), and Terminalia tomentosa was associated with soil hardness. Our results indicate that secondary succession of a dry forest is not initially led by pioneer species, but instead, by superior competitors capable of resprouting, and that species distributions are primarily determined by the filtering effects of edaphic conditions. We believe that the dry-forest species retain their soil–species relationships despite heavy disturbances.

In lowland tropical and temperate forests, nitrogen (N) and phosphorus (P) resorption from senesced leaves may reflect a mechanism of conservation of a limiting nutrient (Edwards & Grubb 1982, Killingbeck 1996, Proctor et al. 1989, Scott et al. 1992, Songwe et al. 1997, Vitousek & Sanford 1986). At the ecosystem level it has important implications for element cycling. The nutrients which are resorbed during leaf senescence are directly available for further plant growth, which makes a species less dependent on current nutrient uptake. Nutrients which are not resorbed, however, will be circulated through litterfall in the longer term (Aerts 1996).

Fruits are a major food resource for wildlifes and have evolved different traits which attract specific frugivores and facilitate seed dispersal. This study examines the quantity of the frequency of fruit tree species, distribution amongst fruit traits and estimates the potential availability of the fruit resource for frugivores in a 16-ha permanent forest plot at Doi Suthep–Pui, Thailand. The similarity amongst traits for fleshy fruited species was explored using Principal Component Analysis (PCA). Fleshy fruited species comprised 122 of 208 tree species >2 cm diameter at breast height (DBH) recorded in the permanent plot. Amongst fleshy fruited species, small fruits (length <20 mm) were most common (63.16% of species) while large fruits were rare (4.1%). Black was the most common fruit colour (43.4%). Principal Component Analysis of fruit traits explained 57% of total variance on the first three axes, and allowed identification of three species groups. Litsea martabanica and Persea gamblei are the greatest density and represented the major PCA group; black, small-sized and thin husk indehiscent fruits. These fruiting trees scattered throughout the permanent plot and were of good regeneration status. Indicating fleshy fruit can be a food resource for frugivores especially small-sized fruit. Furthermore, large-fruited species such as Madhuca floribunda is low density but important to preserve for food resource of large frugivores. This finding is very important not only for forest protection policy but also for wildlife conservation as food resources.

The herpetofauna of a floodplain monsoon rain forest in northern Australia is composed primarily of species from non rain forest habitats. The majority of frog species use rain forest as a seasonal refuge, and there is a marked increase in numbers during the dry season. Faunal richness lies within limits expected on the basis of the length of the dry season and species richnesses of non-Australian faunas. There are few lizard species and an abundance of frog species (none of which is a rain forest specialist) in comparison to rain forest herpetofaunas in other tropical regions. The impoverished lizard fauna, and the paucity of rain forest specialists may be because (a) seasonal invasion of rain forest by frogs prevents evolution of, or colonization by, specialists or (b) rain forest specialists may not have been able to cross semiarid habitats separating the Northern Territory from eastern Australian rain forests. The herpetofaunas of monsoon forests in Cape York Peninsula may provide a means of distinguishing between these hypotheses.

During their ontogeny many organisms exhibit size and/or stage-specific variability in a variety of features related to morphology and ecology, leading to a shift in the ecological niche between size- or stage groups. We analysed such ecological shifts between four larval stage groups in each of two syntopic species of frogs (a total of 5870 individuals) in two West African savanna ponds in Côte d'Ivoire. We hypothesized and confirmed differences between stage groups in ecological variables related to microhabitat and feeding niche. Stage groups differed up to 1‰ in δ15N and 1.5‰ in δ13C isotopic signatures, up to 10 cm in selected water depth, up to 6 m in distance to the pond's edge, and in the coverage of submerged vegetation (range = 10–50%). However, the hypothesis that tadpoles with generalized mouthparts (Kassina spp.) exhibit more pronounced ontogenetic shifts in food-web position than a specialized filter-feeding species (Phrynomantis microps), and that differences between larval stages are more pronounced in a heterogeneous habitat (offering more choices of habitat and food niches) than in a homogeneous habitat (offering less choices) was only partly confirmed. This study underlines that potential niche shift during different ontogenetic stages is an important factor to be considered in ecological studies.

Environmental productivity is important in determining defensive or tolerance traits of plants, with nutrient-rich savannas showing tolerance and nutrient-poor showing defence traits. Animals are affected differently by such traits due to differences in size, and other characters. We studied differences in browsing as a response to plant traits by elephant, giraffe and impala in Mikumi, a nutrient-poor savanna, and Serengeti, a nutrient-rich savanna, both in Tanzania, for a total of 4 mo; 2 mo at each site. Browsing time on a plant, species and height browsed were recorded. Spinesence reduced biting rate by elephant in Serengeti to 3.8 bites min−1, compared with 4.7 without spines, but had no effect on impala or giraffe. Leaf size affected biting rate by giraffe, decreasing with size in Serengeti from 19.8 bites min−1 to 17.4 bites min−1, increasing in Mikumi, from 17.7 to 19.5 bites min−1, but did not differ in elephant and impala. Biting rate by elephant in Serengeti decreased with browsing height from 0.6 m to 4.2 m and by impala in Mikumi decreased from 0.25 m to 1.5 m, while that of giraffe in Mikumi increased with browsing height, peaking at 4.2 m. The effect was comparable for elephant and impala.

In Indonesia and elsewhere, Imperata cylindrica grassland now covers millions of hectares of land previously covered by rain forest. In the present study, shrubs, trees and climbers were recorded in sixteen 10 × 20-m plots and herb cover (ferns, grasses and herbaceous dicots) estimated in nested 2 × 2-m subplots. Butterflies and odonates were netted along 300-m transects. All plots and transects were randomly allocated to a 450 ha, I. cylindrica-dominated landscape. A total of 43 shrub, tree and climber, 16 herb, 67 butterfly and 30 odonate species were recorded. Shrubs, trees and climbers were present throughout the study area, but basal area was very low and mainly consisted of invasive species. Imperata cylindrica covered an estimated 65% of the area with other plant species or bare soil covering the remainder. Butterfly and odonate communities mainly consisted of species with large geographic distributions, but some recorded species had more limited distributions. The latter were, however, species known to associate with perturbed forest environments. Variation in the composition of butterflies and odonates was also related to variation in habitat structure (e.g. altitude and slope) and plant composition. Plant composition in particular appeared to structure both butterfly and odonate communities.

Rooting differentiation between established trees and grasses has been well documented in savannas, but it remains unclear to what extent tree-grass rooting differences affect competition between newly established seedlings and grasses. To examine this question, a greenhouse experiment was conducted at the University of Missouri, USA. Twenty 3-mo-old seedlings each of two African savanna tree species (Acacia nigrescens and Colophospermum mopane) were grown for 8 mo with two crossed factors: grass competition and irrigation depth. Strong negative effects of grass competition on final seedling biomass and leaf photosynthetic and stomatal conductance occurred in both tree species, but no effects of irrigation depth were detected. There was a clear tree species by grass competition interaction, suggesting interspecific variation in competitive response. The results emphasize the importance of below-ground competition with grasses for physiological and morphological responses of tree seedlings, while minimizing the importance of tree-grass rooting depth differences as a factor in modulating the competitive response of trees to grasses at the seedling stage.

Seed dispersal effectiveness (SDE) is related to the role of seed dispersal agents in realizing the reproductive potential of plants through seed dispersal and subsequent plant recruitment. The SDE of a given seed disperser may vary spatially and temporally, with important implications for our understanding of the mutualistic relationships involving plants and frugivores. Here we observed 22 frugivorous bird species visiting an individual tree (Cabralea canjerana) over a 9-y period in a fragment of Atlantic forest in south-eastern Brazil to document the temporal variation in SDE. The quantitative (that takes into account the frequency of feeding visits to the focal plant and the number of fruits removed per visit) and qualitative (that considers the probability of seed deposition on a suitable site for plant recruitment) components of SDE varied in two and one order of magnitude both among bird species and among years within bird species, respectively. As a result, the SDE of bird species fluctuates over the years, especially for a migratory species that is the main seed disperser of C. canjerana (Chivi vireo Vireo chivi) whose quantitative component (i.e. the product of visit and fruit intake rates) varied from 3.0 to 7.1. This study illustrates the dynamic nature of the seed-dispersal environment to which a plant is subjected to over the course of its life, which has important consequences for the plant's individual fitness.

This investigation examined the hypothesis that nutrient deficiency is related to the die-back of Terminalia ivorensis. The study was conducted on three major soil groups in natural forest and T. ivorensis plantations. Five soil chemical factors, Total nitrogen, organic carbon, effective CEC, exchangeable calcium and magnesium, were positively related to die-back. Foliar nitrogen concentrations in trees suffering from die-back were almost 50% of those of healthy trees. The concentrations of magnesium in the leaves of T. ivorensis experiencing die-back were also low. Conversely, high concentrations of foliar calcium were associated with trees under stress. A highly significant relationship was observed between die-back ranks and leaf size.

Threats of forest degradation of the Tano Offin Globally Significant Biodiversity Area present the need to generate eco-information pertinent for its conservational purposes. Ten 50 m × 50 m plots (tree layer) were assessed for plant life forms with diameter ≥ 10 cm. A 10 m × 10 m plot (shrub layer) was located within each of the 50 m × 50 m plots where plant life forms with diameter < 10 cm were assessed. 1 m × 1 m quadrats (herb layer) were laid at the corners of the 50 m × 50 m plots and its centre for canopy closure and natural regeneration assessments. Plant species (240) belonging to 59 families were identified: 171 trees, 41 lianas, 11 shrubs, 7 herbs, 7 herbaceous climbers, 1 epiphyte, 1 grass and 1 fern. Species diversity (H´) of the tree, shrub and herb layers was 2.55, 2.54 and 2.48 respectively. The average maximum tree height was 46.19 m and the basal area was 28.36 m2/ha, which is below the 35 m²/ha conventional basal area value of tropical forests. Celtis mildbraedii and Rinorea welwitschii were the most structurally significant species at the tree and shrub layers, respectively, and a total of 75 tree species were regenerating.

We compared exotic pasture grass cover near the edges of 20–25-y-old secondary forests (N = 8) with those of mature forests (N = 8), bordering actively grazed pastures on the Pacific Coast of Ecuador. We estimated grass cover in 224 1 × 3-m plots along transects that ran from the pasture edge into forest interiors (11–44 m). Using a spline regression, we divided the transects into three segments: exterior (in the pasture), edge and interior (in the forest). With a stepwise regression, we tested the effect of transect section, forest type and distance from edge on grass cover. Forest type, distance from edge, interior transect section and the combined effect of distance from edge in both the interior and exterior sections explained variation in grass cover. Grass abundance was higher and penetrated further into secondary than mature forests. Edge proximity and differences in forest canopy openness likely favours recruitment and persistence of pasture grasses.

Selective logging has been widely employed as a management practice in tropical forests due to its reduced impact on biodiversity. However, by altering microclimatic conditions, logging could affect soil fauna responsible for nutrient cycling and the long-term dynamic of the forest. We investigated how selective logging affected termite species richness, composition, and the distribution of species in trophic groups, as well as the natural response of termites to gradients of soil conditions. Termites and edaphic variables were sampled in 32 permanent plots in southern Amazonia. Plots were subject to selective logging for 10–31 years before termite sampling. Time post-management was associated with changes in termite species composition, and wood-feeding termites were more abundant in recently logged areas. Nevertheless, most of the variation in termite species richness and composition can be attributed to the natural variation in soil clay content. Moreover, soil-dweller species, a vulnerable group strongly linked to soil decomposition, were present in all plots. These results suggest that the impact of selective logging on termite communities might be milder compared with other types of disturbance. It is likely that the decomposition process performed by termites, and consequently long-term ecosystem functioning, is preserved under selective logging.

Despite its high plant diversity, the Amazon forest is dominated by a limited number of highly abundant, oligarchic tree and liana species. The high diversity can be related to specific habitat requirements in many of the less common species, but fewer studies have investigated the characteristics of the dominant species. To test how environmental variation may contribute to the success of dominant species we investigated whether the vital rates of the abundant liana Machaerium cuspidatum is sensitive to canopy height, topographic steepness, vegetation density, soil components and floristic composition across an Ecuadorian Amazon forest. The population was inventoried in 1998 and in 2009. Plants were divided into seedling-sized individuals, non-climbers and climbers. Out of 448 seedling-sized plants 421 died, 539 of 732 non-climbers died, and 107 of 198 climbers died. There was weak positive effect of dense understorey on the relative growth rate of climbers. The mortality of seedling-sized plants was higher in areas with intermediate slope, but for larger plants mortality was not related to environmental variation. The limited sensitivity of the vital rates to environmental gradients in the area suggests that ecological generalism contributes to the success of this dominant Amazonian liana.

It is well known that female adults of frog-biting midges (Corethrellidae) are attracted by anuran mating calls. However, the role of host-emitted cues other than mating calls in determining the level of attraction remains poorly understood. Here, we performed field playback experiments to test how the host-seeking behaviour of Corethrella Coquillett is influenced by different sound stimuli: mating call of a tree frog, cricket call, and no sound. Then, after long-distance host detection, we evaluated if Corethrella can distinguish landing sites by using at short distance the colour and/or shape of anurans. For that, we placed artificial models of frogs with different colours (light green and dark brown) and an artificial caterpillar model (light green colour) on the top of speakers. We found that only frog mating calls presented with the visual cue of an artificial frog were attacked by Corethrella, suggesting that frog shape, regardless of colour, is an important cue for the identification of its hosts. This is the first study providing evidence that after flying long distances guided by frog calls, Corethrella can identify their hosts using visual cues at short distances.

Frugivorous mammals play an important role in maintaining biodiversity and are considered one of the main dispersers of large seeds. In this study, we describe the structure of the interaction network between non-flying mammals and seven plant species with large fruits in a megadiverse savanna-forest mosaic in the Brazilian Cerrado. We also evaluated the individual contribution of each species to the organization of the interaction network and tested whether body mass determined the mammals’ role in the network. To record frugivory events of mammals with arboreal and terrestrial habits, camera traps were installed at ground and canopy levels. We identified 18 mammal species interacting with seven plant species in 515 frugivory events. Our observations highlight an interaction network with a modular and non-nested topology and the important role of large mammals in the network structure, which reflects the importance of the group in potential seed dispersal. The extinction of large frugivorous mammals can cause several damages to ecosystem services in the Brazilian Cerrado through changes in network structure, especially threatening the survival of plant species with large fruits.