Immunological alterations may be used as ecotoxicological biomarkers to detect and monitor biological effects of chemical contaminants in polluted environments. This study reports on a survey of Pacific oysters from the Atlantic coast of Britanny (France) after the “Erika” oil spill. Reared stocks were sampled twice a year from November 2001 to March 2003 at three impacted sites and at an additional site outside the spill area. A multiparametric diagnosis of the immune system was performed on individual hemolymph samples to identify structural, immunopathological alterations and functional impairment of immunocompetent cells. One year after the spill, severe immunological alterations were observed in a site heavily impacted by oil. Since the oysters there had higher contents of PAH compared to the other sites, it was suggested that chronic contamination, possibly generated by oil trapped in the sediments, had induced immunotoxicity. Moreover, moderate variations in some hemolymph parameters observed at the non-impacted area strongly suggested that natural environmental factors may have generated physiological stress. An immunotoxicological index applied here in order to integrate all measurements of defense-related functions appeared to be an efficient tool to identify samples suffering immunological stress.

Trammel net is the main fishing gear used by artisanal fishers in Majorca Island (NW Mediterranean), and is representative of Mediterranean small-scale fisheries using static gear. The use of static gears close to the coast, where seasonal variability and spatial heterogeneity are high, promotes the diversification of fishing practices or metiers. We analyze the seasonal dynamics of the nets used, target species (red and black scorpionfish, red mullet and cuttlefish) exploitation patterns and the socio-economic conditions under which this fishery takes place, based on General Fisheries Directorate daily sale records (2002–2006). Additional personal socioeconomic interviews allowed the characterization of the trammel net fishery, its fishing behaviour, cost structure and conflicts. Catch and effort data and market surveys are used to evaluate the level of exploitation of the target species and allowed describing Majorca trammel net fishery as an activity based on a sustainable resource. The main target species were found to be near their maximum sustainable yield both by means of a surplus production model (with parameters estimated by CEDA-Catch Effort Data Analysis, software) and an age structured assessment model based on yield-per-recruit analysis. Management actions currently debated by local administration and fishers focus on improving fishers' economic situation, rather than on protecting a threatened resource. One of the management actions proposed is a one day effort reduction, which was analyzed here with the help of a bioeconomic simulation model. A 15-year (2005–2020) simulation allows providing advice to local managers to focus on the commercialization aspects, in order to obtain a higher value to the fish production, rather than expecting to obtain higher profits only by a reduction of the offer.

The digestive gland of Pecten maximus consists, as in other lamellibranchs, of numerous blindending tubules which communicate with the stomach by partially ciliated main ducts and non ciliated secondary ducts. The non-ciliated cells of the main ducts are characterized by a well developed brush border constituted by high and dense microvilli and a strong pinocytotic activity. Ciliated and non ciliated cells have a very similar fine structure. The digestive tubules have a large lumen and contain digestive cells at different stages of absorption, digestion and excretion, one part of the tubules being functional while the other is disintegrating. The dark crypts contain the flagellated secretory cells, characterized by a well developed granular endoplasmic reticulum, and the young immature cells which may replace both the secretory and digestive cells. The numerous lipid droplets occurring in the digestive duct cells and in the digestive cells reveal the lipid storage function of the digestive gland. Several enzyme activities involved in digestion have been localized in the digestive gland. High amylase activity and cellulase and lysozyme activities have been found in the ducts and in the tubules, whereas no proteolytic activity could be detected histochemically. Some intracellular peptidases and glycosidases have been localized in the cells of the digestive gland, especially in the brush-border cells of the ducts and in the functional part of the tubules. High alkaline and acid phosphatase activities are displayed by the duct brush-border cells and the digestive and secretory cells. These results show the main role of the digestive gland, both in extracellular digestion (secretion of the digestive enzymes) and in absorption and intracellular digestion and provide information on the respective functions of the different cells within these processes.

Pike-perch Stizostedion lucioperca larvae fasted or given two diets (artificial feed, zooplankton) were studied by transmission electron microscopy and using specific cytological dyes. The objective of this work was to assess the changes in the yolk sac, liver and anterior intestine following the mouth opening stage (95 °C.d, day 5 - 5.8 mm) from endo- to exotrophy periods. The yolk sac included a syncytial envelope closely bound to the proteinaceous vitellus and the oil globule. Its development was similar to that observed in trout (Oncorhynchus mykiss and Salmo fario trutta )and sea-bream (Sparus aurata,) but without vitellus fragmentation into platelets. Vitellus resorption was never achieved in dying larvae. From the end of the endotrophic phase onwards, the amount of hepatic glycogen decreased. Carbohydrate disappeared at the beginning of the exotrophic phase then increased after 220 °C.d (day 10 - 6.0 mm), mainly in zooplankton-fed larvae. Lipids from enterocytes, sinusoids and general blood Stream showed a similar development. They were abundant at 95 °C.d, progressively disappeared up to 260 °C.d (day 12 - 6.3 mm), and increased again from 350 °C.d (day 16 - 6.7 mm) onwards if larvae were fed zooplankton. Dietary lipids did not seem to immediately replace yolk lipids despite absorption in the gut. Various hypotheses are proposed to explain the physiological abnormalities of this critical larval stage. Although zooplankton appeared to have better nutritional qualities than the artificial feed, these two foods proved to be quite unsatisfactory as they induced liver cell changes typical of food deficiency, generally observed in starving larvae.

Freshwater fishing is highly developed in the Amazonian basin, and the problems of managing the fish resource are becoming increasingly acute. The global model of exploited stock dynamics has proved inadequate for explaining the variations observed in catches from one year to the next. Following the results of recent studies in maritime fishing, this work aims to identify the contribution of environmental variables (hydrological parameters have been selected) to the explanation of variations in the abundance of the exploited fish community. An abundance index is calculated based on the catch per unit of effort statistics and the surface of the considered basin. Using a 12-year time series, the results show that the effect of the fishing effort on the index of abundance is negligible when viewed alongside the flood regime parameters for the years prior to the catch. The effects revealed are, in chronological order of appearance: 1) a positive effect of the water level during the flood regime peak three years previous to the catch, probably associated with recruitment for a number of species; 2) the effect of the water level during its rise two years before the catch, which may well be related to competition phenomena; and 3) the effect of severe low-water levels two years before the catch, possibly due to mass natural mortality during the severest periods of low-water. Because there are complex migratory movements of fish populations either side of low-water periods, only the estimated biomass during the flood appears to be an accurate reflection of the mean biomass in the environment. Linear models are presented, where the abundance index is a function of the hydrological parameters previously identified. The model with 3 variables corresponding to the 3 evidenced effects, explains more than 83% of the variations in the annual abundance indices.

Patterns of annual freshwater flows in the Murray River and recruitment of mulloway, Argyrosomus japonicus (Scianidae) were reviewed in terms of recent age structures and historical catches and CPUE. Age distributions from the nearshore marine fishery were dominated by the 1993 age class which comprised 35% and 41% of 2001 and 2002 catches, respectively. In 1993 annual freshwater inflow was 2.4 times the 25 year average. Freshwater inflow explained 28% and 35% of the variability in year class strength in the nearshore marine fishery in 2001 and 2002, respectively. Over 80% of the current South Australian commercial catch of mulloway comprises juveniles taken from the remnant estuary of the Murray River. Our results suggest that recent low levels of recruitment in South Australia's fisheries for A. japonicus may reflect low fresh water inflows since 1993. Since 2000, southern Australia has experienced the worst drought in recorded history and management strategies for this fishery must take into account effects of both environmental factors and fishing mortality on this vulnerable sciaenid population. We suggest that the population of A. japonicus located about the Murray River system is estuarine dependent, that the estuary provides important refuge for juveniles, and that strong year classes, or their absence, may be related to freshwater inflow to this environment. We also suggest that age distributions of this apex predator may provide an indicator of environmental health for the Murray River estuary.

A mass-balanced trophic model was developed for the coral reef lagoon of Uvea atoll (New Caledonia) using the Ecopath software. The model accounts for both pelagic and soft-bottom communities to describe the whole trophic structure and biomass flows in the shallowest part of the atoll lagoon. Phytoplankton production approximately equals the benthic primary production. Benthic biomass accounts for more than 80% of the total living biomass in the shallow lagoon. The benthic domain requires input of food from the pelagic system (mainly zooplankton) and from adjacent areas to sustain the biomass of predatory fishes. Predation pressure was found to be a major force structuring the food web, but it is also suggested that water circulation within the lagoon influences the amount of primary resources, such as plankton, benthic microphytes and detritus.

In the tropics, there is very little information on fish reproduction in intermittent streams and most of the studies are from the neotropic regions. In temporary rivers, environmental conditions are sharply contrasted and the variation amplitude of hydrological and physicochemical characteristics is high. In the Baoulé River (Mali), during the peak of the dry season, the remaining pools comprise only 10% of the total length of the river. During the wet season, there is a short (three months) but intense period of flooding. In this study, the reproductive strategies of 18 species of fishes were investigated in the upper reach of the Baoulé drainage. They belong to eight families, show variation in feeding guilds, and vary in size and habitat preferences. Fishes were collected from February 1985 to November 1988 using gillnets. Two main types of spawning strategies may be distinguished among these species. The first, the ‘total spawners’, have generally a short annual spawning period just before the flood. The second, the ‘small-brood spawners’, produce small batches of eggs at frequent intervals for most of the year. Most of the species inhabiting the Baoulé River exhibit a breeding strategy in relation to the flood seasonality. This type of strategy, common in harsh but predictable environments, favours a synchronous reproduction in phase with the optimal environmental conditions and the production of large number of juveniles that require no parental care. Concerning the Baoulé River, 12 variables related to life-history theory were measured for 18 species. Clustering of these species based on Euclidean distances resulted in two groups. The first corresponds to developed parental care, large oocytes and low fecundity (about a hundred eggs). Two species, Chrysichthys auratus and Sarotherodon galilaeus, belong to this ‘equilibrium strategy’. Others species have a ‘seasonal strategy’, which is adapted to the harsh local conditions. In the Nilo-Sudanian area, most fishes appeared to be associated with a seasonal life history strategy that exploits an annual expansion of aquatic production. In the Baoulé River, the ‘seasonal strategy’is characterised by high fecundity, absence of parental care, limited breeding season and for some species large adult size and upstream spawning migrations to floodplains.

Fishery independent indices of spawning biomass of Atlantic bluefin tuna in western North Atlantic Ocean are presented which utilize National Marine Fisheries Service ichthyoplankton survey data collected from 1977 through 2007 in the Gulf of Mexico. Indices were developed using similarly standardized data from which previous indices were developed (i.e. abundance of larvae with a first daily otolith increment formed per 100 m2 of water sampled with bongo gear). Indices were also developed for the first time from standardized data collected with neuston gear [i.e. abundance of 5-mm larvae (i.e. seven-day-old larvae) per 10 minute tow]. Indices of larval abundance were developed using delta-lognormal models, including following covariates: time of day, time of month, area sampled and year. Due to the large frequency of zero catches during ichthyoplankton surveys, a zero-inflated delta-lognormal approach was also used to develop indices. Finally, a multivariate delta-lognormal approach was employed to develop indices of annual abundance based on both bongo and neuston catches. The results of these approaches were compared with one another and with other indices of larval abundance previously developed for the Gulf of Mexico. Residual analyses indicated that abundance indices of Atlantic bluefin tuna larvae were more appropriately developed from bongo-collected data through the zero-inflated delta-lognormal approach than other data sets and modeling approaches. Also, when modeling bongo-collected data with the zero-inflated delta-lognormal approach, the index values increased, indicating some correction for zero-inflation, and their variability decreased as compared to indices developed with the delta-lognormal approach.

The terms ‘ecosystem-based fisheries management’, ‘ecosystem-based management’ and ‘ecosystem approach to fisheries’ have recently entered the vernacular of fisheries management. Examination of contemporary guidelines and proposals for such an approach illustrates that ecosystem-based fisheries management is, for all intents and purposes, a re-expression of the objectives and processes associated with ecologically sustainable development (and associated international instruments). Since the early 1990's, all levels of government in Australia have committed themselves to the concept of ecologically sustainable development, and a complex network of policies and laws exist to support this, particularly in natural resource management. One significant outcome of these instruments is the application of environmental impact assessment to the management of fisheries. This has forced extensive deliberation of the ecological impact of fisheries and stimulated the development and application of new research tools. Application of environmental impact assessment to the management of fisheries has been a crucial step for the implementation of ecosystem-based fisheries management in Australia. These assessments are embedded within a range of legal and policy instruments that capture the ecological, economic and social dimensions of fisheries. The scientific challenges associated with many aspects of ecosystem-based fisheries management are very significant, but it is likely that the value-based nature of the underlying environmental issues will continue to dominate the managerial agenda.

Ideas and considerations are put forward for managing fisheries and marine populations using primarily trawl surveys to supply biological and spatial indicators of the state of stocks, and to permit catch per unit effort (CPUE)-based assessments. Trawl surveys seldom allow absolute estimates of fish population sizes but, if appropriately located, timed, and designed, can provide a broad range of information about catchable fish species and the ecosystem that supports them. This information may be more conducive to sustainable management of fisheries than the traditional focus on the abundances of selected stocks. The paper first briefly proposes how survey-based methods might supplement existing fishery-dependent stock assessments, as would be necessary during a transition phase to a more ecosystem-orientated system of management. Full survey-based management is then considered in relation to management objectives, the selection of indicators, survey design, reference periods, levels and directions, statistical aspects, CPUE-based assessments, and management responses to good and bad signals from the ecosystem. We argue that existing fishery-dependent stock assessments cannot be claimed to produce absolute estimates of stock abundance and fishing mortality because natural mortality (M) is seldom known accurately and, therefore, that they should not be presumed superior to the relative information from surveys, and an agreeable form of adaptive management.

L'influence de la période (jour, nuit) et de la fréquence d'alimentation (1 à 4 repas fractionnés ou alimentation continue) a été étudiée sur la croissance et l'efficacité alimentaire chez un silure africain (Heterobranchus longifilis). L'expérience, d'une durée de 56 jours, a été réalisée sur des poissons de 74 g de poids moyen initial. Avec un même taux de rationnement (3 % du poids vif/jour), les poissons nourris la nuit ont une croissance significativement plus élevée que ceux nourris le jour et un nourrissage sur l'ensemble du nycthémère n'apporte pas d'amélioration. Les performances de croissance tendent à augmenter avec l'accroissement de la fréquence d'alimentation quelle que soit la période de nourrissage, et les croissances sont significativement plus élevées avec une alimentation en continu, de 2,36 à 2,64 g.j-1. L'indice de consommation est significativement plus faible pour les poissons nourris en continu que pour ceux recevant une alimentation par repas. Le rapport hépatosomatique est significativement plus élevé chez les poissons nourris la nuit que pour ceux nourris le jour. Par contre, les dépôts de graisse dans la cavité abdominale sont plus importants chez les individus nourris de jour et augmentent avec la fréquence des repas. L'analyse des compositions corporelles globales confirme ces observations. En pratique, il est recommandé de nourrir ce poisson en continu durant la nuit, ce mode d'alimentation conduisant aux meilleures performances de croissance.

The reproductive performance of pond tiger shrimp given astaxanthin (100 mg·kg−1) and/or vitamin A (20 000 IU·kg−1) for 61 d in tanks was assessed in a 2 × 2 factorial experiment in a completely randomized design. Tissue carotenoid (total carotenoid; astaxanthin free form. AF; monoester, AM; diester, AD) was analyzed using high performance liquid chromatography. The gonad index (GI) of shrimps fed diets with astaxanthin and/or vitamin A (3.05 ± 0.11 to 3.30 ± 0.17) were significantly higher than shrimps not fed any supplement (2.24 ± 0.17). A significant interaction between astaxanthin and vitamin A for ovarian development and spawning was detected (GI, 3.18 ± 0.14). The ovarian total carotenoid (10.85 ± 1.52 μg·g−1) and astaxanthin (AF, 7.65 ± 1.43 μg·g−1; AM, 0.63 ± 0.12 μg·g−1) content of shrimps fed a diet with astaxanthin supplement were significantly higher than those without. In shrimps fed diets with and without vitamin A, no differences in ovarian total carotenoid (9.38 ± 0.58 μg·g−1) and AF (8.12 ± 1.55 μg·g−1) content were observed except for AM (0.64 pm 0.15 μg·g−1) content. In contrast, the ovarian AD level was significantly higher (1.14 ± 0.3 μg·g−1) in shrimps fed diets with both supplements compared to other diets. A significant interaction between astaxanthin and vitamin A was detected for AD storage. In the hepatopancreas of shrimps fed diets with or without astaxanthin or vitamin A, no significant differences in AF and AM content was observed. On the other hand, the AD (4.92 ± 1.3 μg·g−1) level in the hepatopancreas of shrimps fed diet with vitamin A was significantly higher than those without. These results suggest the involvement of astaxanthin in P. monodon reproduction and its need for inclusion in broodstock diets. Supplementation of vitamin A to broodstock diet of P. monodon appears to enhance its ovarian development and spawning.

When assessing oyster-reef habitat in estuaries it is important to understand the influence of salinity on the spatial and temporal variability of associated organisms. How comparable is community structure among stations located at different points along the salinity gradients of estuaries or among tidal tributaries that experience different levels of freshwater inflow? Do assemblages vary seasonally in response to changing salinity and freshwater inflow? To address these questions, multivariate techniques were employed to analyze decapod crustacean and fish abundance data. Organisms were collected at three reefs along the salinity gradient of three estuaries: the Caloosahatchee River and estuary, Estero River and Bay, and Faka Union Canal and Bay. Additional collections were made from reefs located near the mouths of Estero Bay's five tidal tributaries. Samples were dominated by the decapods Eurypanopeus depressus and Petrolisthes armatus. Commonly occurring species included the decapods Panopeus obesus, Alpheus heterochaelis and Rhithropanopeus harrisii and the fishes Gobiosoma robustum, Lophogobius cyprinoides and Gobiesox strumosus. Analysis of similarities suggested differences among stations located along the salinity gradients of all three estuaries. Community structure also varied among stations located near the mouths of the tidal tributaries of Estero Bay. Multidimensional scaling identified community structure present at upper stations as distinct from that downstream and at high-flow tributaries as distinct from that near low-flow tributaries. Upper stations and stations near high-flow tributaries were typified by E. depressus and gobiid fishes. Downstream stations and stations near low-flow tributaries were typified by E. depressus and P. armatus. Percent dissimilarity was greatest when upper and lower stations were compared along the salinity gradient or when low salinity and high-salinity sites were compared among tributaries. Within-station sample variability tended to be higher upstream or in association with high-flow tributaries.

Two trawl surveys were carried out in the summer months (June–July) of 1996 and 1997 along the whole South Adriatic area (Mediterranean sea) for the first time, using the same vessel and the same sampling gear (European Community Research Project ‘MEDITS’); previous research data referred only to the south-western Adriatic side. A total list of 168 demersal species (fishes, cephalopods and crustaceans) was obtained during the surveys; species abundance data (individuals/trawling hour) were processed according to multivariate techniques in order to describe the composition and the distribution of the main species assemblages within the investigated area (10–800-m bathymetric range). Multivariate analysis of MEDITS survey catch data showed a bold relationship between fish assemblages and depth, while the influence of depth was lower with respect to cephalopod and especially crustacean assemblage distribution.

Most recent authors have called the Chilean blue mussel (formerly Mytilus chilensis) Mytilus edulis. Mussels from four nominal species (Mytilus edulis, M. trossulus, M. galloprovincialis and M. chilensis) were collected from the eastern coast of Newfoundland, Canada, New Zealand and the southern coast of Chile. Canonical discriminant analysis of selected shell morphometrical characters showed that although there is some overlap in canonical variates, the three nominal species, M. edulis, M. trossulus and M. chilensis can be morphologically divided into three distinct groups. The two nuclear-DNA markers (ITS and Glu-5) and the mtDNA marker studied indicate that the nuclear and mitochondrial genomes of M. edulis and M. trossulus are different. M. edulis, M. galloprovincialis and M. chilensis share similar restriction fragment patterns for the mtDNA and for the ITS nuclear-DNA marker, while the Glu-5 polymerase chain reaction (PCR) assay showed that the M. edulis and M. chilensis genotypes disagree, producing species-specific banding patterns that can be used as a diagnostic marker between the two nominal species. The molecular and morphometric data reported here give more evidence to support the view of other authors that the Chilean blue mussel should be included as M. edulis subspecies: Mytilus edulis chilensis.

With the aim of establishing cryopreservation protocols for oyster (Crassostrea gigas) embryos, toxicity of single or combined cryoprotectants to oyster embryos was investigated. In experiments on the toxicity tolerance of oyster embryos, four conventional cryoprotectants, namely, acetamide (A), dimethyl sulfoxide (DMSO), ethylene glycol (EG) and propylene glycol (PG), with concentrations from 1 to 5 M were used to test the toxicity tolerance of oyster embryos at eight different developemental stages. On a molar-equivalent basis, DMSO appeared to be less toxic to PG, EG and acetamide in general. Oyster embryos were tolerant to low concentrations of all cryoprotectants tested in the range from 1 M to 2 M for all developmental stages. Early stage embryos were more vulnerable to high concentration (4 M and 5 M) cryoprotectants tested than late stage embryos. Experiments were subsequently performed to study the combined effects of DMSO and acetamide adding trehalose or glucose in reducing toxicity to 4 hour oyster embryos. The use of trehalose or glucose reduced toxicity of high cryoprotectant concentrations. Survival was higher when DMSO was combined with acetamide than when using DMSO or acetamide alone at high concentration (5 M). By adding trehalose to combined 5 M DMSO and acetamide (total concentration) an average survival rate of 67 ± 7% was obtained in contrast to 8 ± 5% or 2 ± 1% survival when testing with 5 M DMSO or 5 M acetamide, respectively.

A method for acoustic abundance estimation by horizontal guided sonar of fish schooling close tosurface is presented. The basic principle is to measure the horizontal area of schools in situ, and derive the school biomass subsequently through a school area to school biomass relationship. The application of the method is exemplified through a sonar survey in the eastern North Sea-Skagerrak in September 1990. The areas of recorded schools were measured by the estimate function of a Furuno CSH-70 sonar, and selected schools were captured by purse seine to establish a school-area to school-biomass relationship. In the actual region, the biomass of herrig (Clupea harengus) and mackerel (Scomber scombrus) was estimated to about 90 000 and 43 0000 tons, respectively. The accuracy of the method is discussed and improvements are suggested.