Knowledge of different fractions and availability of boron (B) is essential while studying the response of crops to B. Fractionation provides information about the chemistry of B and quantifies its bioavailability. Such information is potentially valuable for predicting bioavailability, B leaching, dynamics, transformation between chemical forms in soils and environmental impacts. Total B (T-B) is quantified into five fractions: readily soluble (Rs-B), specifically adsorbed (Spa-B), oxide bound (Ox-B), organically bound (Org-B) and residual B (Res-B). Of these, Rs-B is the fraction present in soil solution and adsorbed weakly by soil particles, and is most readily available for plant uptake. It accounts for 1–2% of T-B. The second most plant available form is Spa-B; it may be adsorbed onto clay surfaces or associated with organic matter (OM) in soil. The remaining fractions, Ox-B, Org-B and Res-B, are unavailable for plant uptake. The major portion (generally 87·4–99·7%) of T-B is composed of Res-B. Overall, the relative proportion of B in various fractions is in the order of Res B > Org-B > Spa-B > Rs-B > Ox-B. Several factors such as soil pH, soil OM, clay minerals, iron and aluminium oxides and calcium carbonate content may change the relative proportion of B in various fractions and the transformations among different soil B fractions. Some of the B fractions are correlated with others and exhibit responses in terms of plant growth. Non-specifically adsorbed (Nsa-B) and Spa-B are positively and significantly correlated to some sub-fractions of Ox-B, such as B occluded in manganese oxyhydroxides (Moh-B). The most readily available forms of B for plants are Nsa-B, Spa-B and Moh-B.

Cereals are of major importance in human and animal nutrition, and the mycotoxin content is of great health and economic concern for the food sector and consumers. In Europe, Fusarium graminearum (FG) is the prevalent Fusarium species leading to Fusarium head blight on small grain cereals and contamination of grains by its main mycotoxin deoxynivalenol (DON). The present study assessed the costs of preventive agronomic measures to reduce the risk of DON contamination in wheat besides the use of fungicides. The abatement costs were calculated by linking actual data on wheat production costs and profits with assessments of DON contents based on results of the forecast model FusaProg for the period 2005–2011. Analysis revealed that ploughing was a relatively efficient measure to reduce DON risk compared with modifying crop rotation or growing a more FG-resistant wheat variety. Given a threshold value of 1·25 mg DON/kg wheat, a reduction of 0·1 mg DON was related to additional production costs of at least 2·5%. These economic findings are of relevance for farmers and policy makers in order to define sustainable production systems enabling both a high level of food safety and reducing the use of plant protection products.

A range of wheat cultivars, including elite cultivars, older cultivars and some preferred by organic growers, were trialled under high and low nitrogen (N) conventional and organic conditions to determine whether cultivars that yield highly under organic conditions have the same relative yield under conventional conditions. A range of cultivar mixtures was also assessed to see whether these gave yield advantages or superiority in either farming system. The conventional trials were grown with and without full fungicide programmes, which largely controlled disease. Amongst the cultivars, Alchemy showed superior yield under organic conditions as did Pegassos, but under conventional conditions Pegassos was always one of the low-ranking cultivars. Under conventional conditions the more recent cultivars Alchemy, Glasgow and Istabraq yielded highly, while an older one, Consort, yielded highly under low fertilizer conditions, and both Ambrosia and Deben also yielded highly generally. Fungicide and high N favoured the disease-susceptible, high-yield cultivars such as Glasgow whereas Consort, an older susceptible cultivar, was favoured by fungicide and low N. Together this demonstrates that whilst the yield characteristics of some elite germplasm are also expressed under organic conditions, at least one cultivar that yielded poorly under conventional conditions showed adaptation towards the organic conditions of these trials. Other cultivars yielding poorly under conventional conditions also gave poor yield under organic conditions. The equal proportion mixtures of cultivars grown under conventional conditions showed no evidence of differences in yield from the mean of the component cultivars grown separately, but combinations of Glasgow, Alchemy and Istabraq gave consistently high yield.

Spot blotch disease caused by Bipolaris sorokiniana (Sacc.) Shoem causes yield losses and reduces grain quality in wheat. Molecular markers reported to be linked with resistance to B. sorokiniana could accelerate the identification of resistant genotypes as they are independent of the environmental effect. However, before they can be utilized for marker assisted selection (MAS), validation in an independent population is required. The objective of the present study was therefore to validate three simple sequence repeat (SSR) molecular markers (Xwgm570, Xgwm544 and Xgwm437) linked with resistance to B. sorokiniana. The markers were validated using 66 wheat genotypes comprising 11 parental genotypes and 55 F2 progenies. Single marker analysis was performed using simple linear regression to ascertain the relationship between the marker and the trait. All the markers were confirmed to be associated with resistance. They all gave significant association with resistance to B. sorokiniana. The markers amplified DNA fragments in the resistant parental genotypes that were similar to those observed in resistant F2 progenies, but absent in the susceptible ones. Hence, these markers could be useful in increasing the efficiency of selection for resistance to B. sorokiniana in wheat breeding. Since the R2 values are low, a combination of two or three SSR markers can be employed during MAS. This was evident by the multiple linear equation which gave a combined R2 value of 18·0%, obtained from the inclusion of all three markers.

Plant defence systems can be induced by biotic and abiotic stress. Experiments were undertaken to explore the feasibility of different fungal proteins for the reduction of vegetable diseases. Total proteins purified from three soil-borne and five foliar fungal pathogens had no fungistatic effects nor did they trigger hypersensitive reactions on test plants. The abilities to promote plant growth and to reduce disease severity varied among test proteins and plants. Depending on test proteins, experiments have demonstrated that exogenous application of fungal proteins could reduce Alternaria brassicicola-induced black spot severity on cabbage, Colletotrichum spp.-induced anthracnose on Chinese cabbage and cucumber, Rhizoctonia solani-induced damping-off on sweet pepper and Chinese cabbage, and powdery mildew on cucumber seedlings. An Alternariaprotein effector 1 (Ape1)-coding gene was cloned from two Alternaria spp. and expressed in Escherichia coli. The expressed Ape1 reduced anthracnose incidence on cucumber leaves, indicating that Ape1 was the primary activator in the crude protein extracts responsible for disease reduction. Application of Alternaria proteins onto Chinese cabbage seedlings caused an increase of phenylalanine ammonia lyase and peroxidase activities in treated seedlings, which may have played a role in host defence.

Plants’ ability to rebuild their tiller population is affected by weather changes and management strategies. The hypothesis of the present study was that frequency and severity of defoliation alter Mulato grass (Brachiaria ruziziensis × Brachiaria brizantha cv. Marandu) sward development, and the proportion of aerial and basal tillers, interfering with sward stability. The objective was to evaluate aerial, basal and total tiller population density and changes in tillering dynamics. Treatments corresponded to strategies of rotational grazing characterized by combinations between two pre-grazing (95% and maximum canopy light interception during regrowth; LI95% and LIMax) and two post-grazing conditions (15 and 20 cm stubble height). The experimental period comprised four seasons of the year: summer 2008 (February–March 2008); autumn–early spring (April to mid-November 2008); late spring (mid-November–December 2008); and summer 2009 (January–March 2009). Density of aerial tillers decreased from summer 2008 to late spring. Tiller death decreased from summer 2008 to autumn–early spring. Aerial and total tiller death increased from late spring to summer 2009, mainly for the LI95% treatment. No differences were observed in the tiller population stability index of aerial tillers for LI treatments or post-grazing heights. The balance between tiller appearance and death for basal tillers remained relatively stable from summer 2008 to late spring. For aerial tillers the balance decreased to negative values from summer 2008 to autumn–early spring for both LI treatments. For total tiller population, the balance decreased to negative values from summer 2008 to autumn–early spring. Results indicated a strong seasonal effect on Mulato grass tillering and growth. Tillering dynamics were affected primarily by grazing frequency, which changed the relative importance of basal and aerial tillers. The results suggested that basal tillering was the predominant perennation pathway.

The adequate management of soil acidity has long been a challenge in no-till (NT) cropping systems. Some studies conducted in sub-tropical conditions have demonstrated the feasibility of surface liming. However, for tropical regions with dry winters, little long-term information about adequate rates and frequencies of application is available. A 12-year field trial was performed under a tropical no-tillage system with an annual crop rotation scheme. The treatments were composed of four lime rates (0, 1000, 2000 and 4000 kg/ha), estimated via the base saturation (BS) method. Surface application of lime was found to be an effective method for improving the soil fertility profile under this long-term NT cropping system. All three acidity components (pH, hydrogen + aluminium (H + Al), exchangeable Al) and some fertility attributes (phosphorus, exchangeable calcium and magnesium, and BS) were adjusted to a linear function, and better soil chemical conditions were obtained in the 4000 kg/ha treatment, even 4 years after the final application. Due to soil chemical changes, the root length density of wheat and common bean was greater at depths <0·20 m, which led to a higher grain yield, even under unfavourable weather conditions. The results indicate that the application of lime at higher rates can be an acceptable criterion for a tropical Oxisol under a no-tillage system, reducing the frequency of lime application.

Managed grasslands are characterized by rotations of leys and arable crops. The regime of water flow evolves during the leys because of earthworm and root activity, climate and agricultural practices (fertilizer, cutting and cattle trampling). The effects of duration of the leys, cattle trampling and fertilizer practice on the movement of water through sandy loam soil profiles were investigated in managed grassland of a dairy operation. Experiments using tracer chemicals were performed, with or without cattle slurry application, with cutting or grazing, in the 1st and the 3rd year of ley, and in winter rye. Each plot was irrigated for an hour with 18·5 mm of water containing a conservative tracer, potassium bromide; 24 h after irrigation, macropores >1 mm were recorded visually on a horizontal plan of 0·7 m2 at five depths (10, 30, 40, 70 and 100 cm). The bromide (Br−) concentration in soil was also analysed at these depths and the density of the different earthworm species were recorded. The density of macropores was not directly influenced by the factors investigated. The abundance of anecic earthworms was larger after 3 years of ley and was not affected by grazing (trampling or dung pat deposits) or fertilizer practice. The water infiltration estimated from the Br− concentration was not influenced by fertilizer practice and was reduced after 3 years of ley due to settlement, but was greater than that for the arable phase of the rotation. As shown by Br− concentration, preferential flow was induced by the grazing regime. Infiltrating water may bypass the soil matrix under similar or more extreme conditions than in the current experiment. Such hydraulic functioning in the grazing regime is expected to reduce the risk of leaching of nitrate contained in soil water.

Maize (Zea mays L.)–common bean (Phaseolus vulgaris L.) intercropping is a recent practice in north-western Ethiopia and there is limited information on its productivity. A field experiment was conducted at South Achefer and Mecha in north-western Ethiopia during the 2012 and 2013 crop growing seasons to determine combinations of intercrop planting arrangement (IPA) with nitrogen (N) and phosphorus (P) rates for optimizing maize–common bean intercrop productivity and profitability. Treatments consisted of factorial combinations of two IPA (single row of common bean between maize rows and paired rows of common bean between paired rows of maize), two N rates (92 and 128 kg N/ha) and two P rates (20 and 40 kg P/ha). A sole crop maize with recommended fertilizer rate of 128/40 kg N/P/ha was used as a control treatment. The treatments were laid out in a randomized complete block design with three replications. Results indicated that land equivalent ratio was more than unity, and the intercrop system was 20% more productive relative to the sole crop. Maize equivalent yields were highest for most of the intercrop treatments relative to mono-crop maize with yield advantage of 14% from single row IPA with 128/20 kg N/P/ha. Single row IPA with 128/20 kg N/P/ha and paired row IPA with 92/20 kg N/P/ha increased financial returns by 16 and 8% relative to sole crop maize, respectively. Smallholder maize-based cropping of north-western Ethiopia could be nutritionally, agronomically and financially improved through maize–common bean intercropping of single row IPA with appropriate nutrient management.

Crops often experience combined soil stresses. Root responses to soil penetration resistance (PR) and drought stress can be an important basis for crop management. In 2013/14, a 2-year experiment was conducted to evaluate the effect of tillage treatment and drought stress (no irrigation for 4, 12 and 20 days during the V10–V16 growth stage) on the root length, diameter, cortex and cortical cell, and grain yield of maize (Zea mays L.) in a clayey red soil in southern China. Total root length and average root diameter were significantly correlated with soil PR and moisture. The cortical cell file number increased with soil PR and drought stress, while cortical cell size increased only with soil PR. Soil PR and moisture played different roles in maize root morphology modifications, but were both affected by tillage practices. Deep ploughing and conventional tillage increased soil moisture under severe drought stress conditions, whereas soil compaction and no-till significantly increased soil PR. The results indicate that high PR in clayey red soil was responsible for a decrease in maize root size and grain yield under drought conditions.

In order to describe the growth curves in Iranian Moghani sheep, five non-linear mixed mathematical equations (Brody, Negative exponential, Logistic, Gompertz and von Bertalanffy) were compared. After selecting the best-fitted model based on purely statistical criteria, variance components and genetic parameters for growth curve characteristics were estimated. The data set and pedigree information used in the current study were obtained from the breeding station of Moghani sheep and included 7905 weight records of 1581 lambs from birth to 400 days of age between the years 1994 and 2012 inclusive. Each model was fitted to body weight records for all lambs, males, females, single and twin lambs using the NLMIXED procedure in SAS and the parameters were estimated. Animal was considered as subject in the models. The non-linear mixed models were examined for goodness of fit using Akaike's information criterion (AIC) and residual variance. Marginal posterior distribution of genetic parameters and variance components were estimated using the Threshold Model programme. The Gibbs sampler was run for 1 000 000 rounds and the first 200 000 rounds were discarded as a burn-in period. Logistic model provided the best fit of growth curve in males, females, singles, twins and all lambs due to the lower values of AIC and residual variance compared with other models. Posterior mean estimates of direct heritabilities for asymptotic weight (A), initial animal weight (B) and maturation rate (K) parameters of Logistic model were 0·21, 0·24 and 0·29, respectively. Also, posterior mean estimates of maternal heritabilities for A, B and K were 0·27, 0·24 and 0·19, respectively. Estimate of correlation between direct and maternal genetic effects for A, B and K parameters were −0·33, −0·69 and −0·51, respectively. Estimates of direct genetic correlation between A–B, A–K and B–K were positive and equal to 0·19, 0·07 and 0·28, respectively. Also, maternal genetic correlations between A–B, A–K and B–K were positive and equal to 0·43, 0·34 and 0·55, respectively. In general, evaluation of different growth equations used in the current study indicated the potential of the non-linear functions to fit body weight records of Moghani sheep. Also, the results of the current study showed that improvement of growth curve parameters of Moghani sheep could be possible in selection programmes. Therefore, development of an optimal selection strategy to achieve a desired shape of growth curve through changing genetically the parameters of model would be very important.

The objective of the current study was to quantify the dry matter (DM) digestibility, and total ash (TA) and mineral release from 12 concentrate and 12 forage feedstuffs commonly fed to cattle using in situ and in vitro methods. Concentrate and forage feedstuffs were incubated in the rumen of ruminally cannulated beef bulls at eight different time points. Two different trials were conducted for concentrates and forages, with maximum incubation time of 72 and 120 h, respectively. The residue from samples incubated for 24 h were treated with pepsin and hydrochloric acid to simulate abomasum digestion in vitro. The initial and residual samples after in situ and in vitro incubations were measured. An asymptotic model was adopted for estimating solubility of minerals, disappearance rate of DM, and TA. Correlations between feedstuff contents and mineral release were evaluated. Residual samples from rumen fermentation after 24 h were incubated in simulated abomasal conditions and mineral release was measured. Cluster analysis was performed to group feedstuffs in relation to TA release. Large variability was observed between concentrate and forage feedstuffs for all constituents analysed. Large variability was observed for the effective ruminal degradation of TA and individual mineral release. When feedstuffs were clustered according to the immediately soluble fraction (‘a’), the insoluble by potentially releasable fraction (‘b’) and the release rate of ‘b’ (‘kd’,/h) estimates of TA ruminal release, four groups were identified. From group ‘1’ to group ‘4’, an increase in the soluble fraction and a reduction in both moderate releasable fraction and release rate was observed. Neutral detergent fibre content had a negative correlation with mineral release in the rumen, while mineral content had a positive correlation. These results demonstrate that mineral solubilization in the digestive tract is not the limiting factor for mineral absorption from the feedstuffs tested.

Moringa oleifera is a rich source of antioxidants and a promising feed for livestock, due to significant amounts of protein, vitamins, carotenoids and polyphenols, and negligible amounts of anti-nutritional factors. The current study tested whether ensiling would preserve the antioxidant capacity of M. oleifera plants, and assessed whether Moringa silage, fed as a substitute for maize silage, would confer health-promoting traits and affect milk production in dairy cows. To this end, hand-harvested M. oleifera plants were ensiled, with or without molasses and inoculants, in anaerobic jars at room temperature (25 °C) for 37 days. At the end of the storage period the silages were analysed for pH, lactic acid and acetic acid concentrations, aerobic stability, antioxidant capacity, polyphenols and protein content, and tocopherols and carotenoids concentrations. Moringa silages exhibited higher antioxidant capacity compared with fresh and dried Moringa plants, not related to polyphenol content but presumably attributed to accumulation of amino acids and low molecular weight peptides. Based on these findings, a large-scale ensiling protocol was implemented, followed by a feeding trial for dairy cows, in which Moringa silage replaced 263 g maize silage/kg in the diet. Cows fed Moringa silage had higher milk yield and antioxidant capacity and lower milk somatic cell counts compared with controls, during some stages of lactation. These findings imply that ensiling M. oleifera is an appropriate practice by which health and production of dairy cows can be improved.