The Ediacaran–Cambrian (E-C) transition (∼542–517 Ma) witnessed the rapid evolution of Cambrian animals, which was accompanied by carbon cycling anomalies and a significant increase in the concentration of oxygen in Earth’s atmosphere. The mechanisms stimulating the evolution of complex eukaryotes, however, remain problematic, especially concerning the link between biological evolution and contemporaneous changes in the oceanic environment. In this study, integrated δ13Ccarb–δ13Corg–δ15N compositions were analysed from the YD-4 core samples to understand redox fluctuations and nitrogen cycling of the middle Yangtze Block across the E-C transition. Two negative δ13Ccarb excursions (N1 and N2) and a positive δ13Ccarb excursion (P1) are identified from the studied samples and are supposedly of primary origin. Constrained by of the U-Pb age, biolithology and pattern of isotopic variation, N1, P1 and N2 are comparable to the Basal Cambrian Carbon Isotope Excursion (BACE), Zhujiaqing Carbon Isotope Excursion (ZHUCE) and Shiyantou Carbon Isotope Excursion (SHICE). We interpreted the decreased δ15N values in this study as resulting from intensified atmospheric nitrogen fixation driven by enhanced denitrification associated with expanded marine anoxia, as well as partial ammonium assimilation, while increased δ15N values suggest weakened denitrification associated with an amplified oxic water mass. The temporal coincidence of N1 and N2, with two episodes of negative δ15N excursions, and of P1, with a positive δ15N excursion, suggests that variable oceanic redox conditions and nitrogen bioavailability may have influenced the evolution of the Cambrian eukaryote-dominated community.

Fungi play a key role in ecosystem nutrient cycles by scavenging, concentrating, translocating and redistributing nitrogen. To quantify and predict fungal nitrogen redistribution, and assess the importance of the integrity of fungal networks in soil for ecosystem function, we need better understanding of the structures and processes involved. Until recently nitrogen translocation has been experimentally intractable owing to the lack of a suitable radioisotope tracer for nitrogen, and the impossibility of observing nitrogen translocation in real time under realistic conditions. We have developed an imaging method for recording the magnitude and direction of amino acid flow through the whole mycelial network as it captures, assimilates and channels its carbon and nitrogen resources, while growing in realistically heterogeneous soil microcosms. Computer analysis and modeling, based on these digitized video records, can reveal patterns in transport that suggest experimentally testable hypotheses. Experimental approaches that we are developing include genomics and stable isotope NMR to investigate where in the system nitrogen compounds are being acquired and stored, and where they are mobilized for transport or broken down. The results are elucidating the interplay between environment, metabolism, and the development and function of transport networks as mycelium forages in soil. The highly adapted and selected foraging networks of fungi may illuminate fundamental principles applicable to other supply networks.

From laboratory experiments with seedlings and young trees of Norway spruce (Picea abies L. Karst.), a cycling pool of soluble non-protein N compounds is thought to be indicative of the N-nutritional status of trees. In order to test whether this assumption can be transferred to mature trees grown in the field, xylem sap and phloem exudate were collected from spruce trees in two remote forest stands: (1) a N-limited stand (Villingen site), and (2) a stand where trees are sufficiently supplied with N from the soil (Schluchsee site). Trees at these sites were c. 80–100 (Villingen site) and c. 40–60 (Schluchsee site) yr old. In addition to untreated control areas, one entire watershed area at both sites was subjected to (NH2)2SO4 fertilization to the soil.

In the xylem sap of the spruce roots at both sites Gln, Asp and Arg were the dominant total soluble non-protein nitrogen (TSNN) compounds. In the xylem sap of the trunk and the twigs Arg was virtually absent and Gln plus Asp dominated TSNN. On average, TSNN in the xylem sap of trees at the Schluchsee site was 1·5–2-fold higher than those at Villengen. Highest TSNN contents in the xylem sap were found during growth and development of current year tissues, while the lowest TSNN contents were found in summer. At the Villingen site (NH4)2SO4 fertilization caused an increase in the Gln content in the xylem sap of all tree sections analysed as well as an increase in the Arg content in the xylem sap of the roots. At the Schluchsee site only a small increase in TSNN contents of the xylem was observed, mostly in the xylem sap of the roots. In phloem exudates TSNN contents were much higher in trees on the Schluchsee than on the Villingen site. The seasonal pattern of TSNN in phloem exudates was similar to the seasonal pattern found in the xylem sap. During spring and early summer Gln was the predominant TSNN compound in phloem exudates, but during late summer and autumn Arg became predominant. At the Villingen site (NH4)2SO4 fertilization caused a significant increase in TSNN contents in phloem exudates of twigs and roots, but at Schluchsee an increase in TSNN was found only in phloem exudates of the roots. At both field sites Arg that was not transported to the shoot by xylem transport, was allocated from the leaves to the roots by phloem transport and was cycled within the root system by both xylem and phloem transport. From these results it is calculated that shoot-to-root signalling by long-distance transport of amino compounds can also contribute to the regulation of N-nutrition of mature spruce trees. Apparently, the internal cycling of individual N compounds within spruce trees differs considerably.

Human activity has greatly perturbed the nitrogen cycle through increased fixation by legumes, by energy and fertilizer production, and by the mobilization of N from long-term storage pools. This extra reactive N is readily transported through the environment, and there is increasing evidence that it is changing ecosystems through eutrophication and acidification. Rothamsted Experimental Station, UK has been involved in research on N cycling in ecosystems since its inception in 1843. Measurements of precipitation composition at Rothamsted, made since 1853, show an increase of nitrate and ammonium N in precipitation from 1 and 3 kg N ha−1 yr−1, respectively, in 1855 to a maximum of 8 and 10 kg N ha−1 yr−1 in 1980, decreasing to 4 and 5 kg N ha−1 yr−1 today. Nitrogen inputs via dry deposition do, however, remain high. Recent measurements with diffusion tubes and filter packs show large concentrations of nitrogen dioxide of c. 20 μg m−3 in winter and c. 10 μg m−3 in summer; the difference is linked to the use of central heating, and with variations in wind direction and pollutant source. Concentrations of nitric acid and particulate N exhibit maxima of 1·5 and 2 μg m−3 in summer and winter, respectively. Concentrations of ammonia are small, barely rising above 1 μg m−3.

Taking deposition velocities from the literature gives a total deposition of all measured N species to winter cereals of 43·3 kg N ha−1 yr−1, 84% as oxidized species, 79% dry deposited. The fate of this N deposited to the very long-term Broadbalk Continuous Wheat Experiment at Rothamsted has been simulated using the SUNDIAL N-cycling model: at equilibrium, after 154 yr of the experiment and with N deposition increasing from c. 10 kg ha−1 yr−1 in 1843 to 45 kg ha−1 yr−1 today, c. 5% is leached, 12% is denitrified, 30% immobilized in the soil organic matter and 53% taken off in the crop. The ‘efficiency of use’ of the deposited N decreases, and losses and immobilization increase as the amount of fertilizer N increases. The deposited N itself, and the acidification that is associated with it (from the nitric acid, ammonia and ammonium), has reduced the number of plant species on the 140-yr-old Park Grass hay meadow. It has also reduced methane oxidation rates in soil by c. 15% under arable land and 30% under woodland, and has caused N saturation of local woodland ecosystems: nitrous oxide emission rates of up to 1·4 kg ha−1 yr−1 are equivalent to those from arable land receiving >200 kg N ha−1 yr−1, and in proportion to the excess N deposited; measurements of N cycling processes and pools using 15N pool dilution techniques show a large nitrate pool and enhanced rates of nitrification relative to immobilization. Ratios of gross nitrification[ratio ]gross immobilization might prove to be good indices of N saturation.

Diverse soil microbiological studies have attempted to assess deterioration or improvement in soil quality. These studies have been done on three levels: population level studies of the dynamics of species that are presumed to be important or sensitive; community level studies of microbial community structure, such as species diversity and frequency of occurence of species; and ecosystem level studies of a range of soil processes. We suggest that ecosystem level approaches offer the best possibilities for rapidly assessing changes in soil quality. Data from such studies will allow researchers to decide whether to proceed with population or community level studies.