Viruses are the most numerically abundant biological entities on Earth. As ubiquitous replicators of molecular information and agents of community change, viruses have potent effects on the life on Earth, and may play a critical role in human spaceflight, for life-detection missions to other planetary bodies and planetary protection. However, major knowledge gaps constrain our understanding of the Earth's virosphere: (1) the role viruses play in biogeochemical cycles, (2) the origin(s) of viruses and (3) the involvement of viruses in the evolution, distribution and persistence of life. As viruses are the only replicators that span all known types of nucleic acids, an expanded experimental and theoretical toolbox built for Earth's viruses will be pivotal for detecting and understanding life on Earth and beyond. Only by filling in these knowledge and technical gaps we will obtain an inclusive assessment of how to distinguish and detect life on other planetary surfaces. Meanwhile, space exploration requires life-support systems for the needs of humans, plants and their microbial inhabitants. Viral effects on microbes and plants are essential for Earth's biosphere and human health, but virus–host interactions in spaceflight are poorly understood. Viral relationships with their hosts respond to environmental changes in complex ways which are difficult to predict by extrapolating from Earth-based proxies. These relationships should be studied in space to fully understand how spaceflight will modulate viral impacts on human health and life-support systems, including microbiomes. In this review, we address key questions that must be examined to incorporate viruses into Earth system models, life-support systems and life detection. Tackling these questions will benefit our efforts to develop planetary protection protocols and further our understanding of viruses in astrobiology.

The main idea of this work is to develop a chronological and descriptive historical review in a summarized form about content on astrobiology, which is a research area considered as an emerging science. This is exploratory research that was developed from document review from scientific articles and books, that related to the themes of astrobiology, exobiology and the search for life outside the Earth were used. Based on the research developed, it was possible to collect data related to the vision of other worlds beyond Earth from the ancient Greeks to the present day. Finally, it was possible to conclude that although astrobiology is a recent area of scientific research, the concept and search for life outside the Earth already existed long before the development of modern science.

Almost all living organisms on Earth utilize the same 20 amino acids to build their millions of different proteins, even though there are hundreds of amino acids naturally occurring on Earth. Although it is likely that both the prebiotic and the current environment of Earth shaped the selection of these 20 proteinogenic amino acids, environmental conditions on extraterrestrial planets and moons are known to be quite different than those on Earth. In particular, the surfaces of planets and moons such as Mars, Europa and Enceladus have a much greater flux of UV and gamma radiation impacting their surface than that of Earth. Thus, if life were to have evolved extraterrestrially, a different lexicon of amino acids may have been selected due to different environmental pressures, such as higher radiation exposure. One fundamental property an amino acid must have in order to be of use to the evolution of life is relative stability. Therefore, we studied the stability of three different proteinogenic amino acids (tyrosine, phenylalanine and tryptophan) as compared with 20 non-proteinogenic amino acids that were structurally similar to the aromatic proteinogenic amino acids, following ultraviolet (UV) light (254, 302, or 365 nm) and gamma-ray irradiation. The degree of degradation of the amino acids was quantified using an ultra-high performance liquid chromatography-mass spectrometer (UPLC-MS). The result showed that many non-proteinogenic amino acids had either equal or increased stability to certain radiation wavelengths as compared with their proteinogenic counterparts, with fluorinated phenylalanine and tryptophan derivatives, in particular, exhibiting enhanced stability as compared with proteinogenic phenylalanine and tryptophan amino acids following gamma and select UV irradiation.

Lithopanspermia Theory has suggested that life was transferred among planets by meteorites and other rocky bodies. If the planet had an atmosphere, this transfer of life had to survive drastic temperature changes in a very short time in its entry or exit. Only organisms able to endure such a temperature range could colonize a planet from outer space. Many experiments are being carried out by NASA and European Space Agency to understand which organisms were able to survive and how. Among the suite of instruments designed for extraplanetary exploration, particularly for Mars surface exploration, a Raman spectrometer was selected with the main objective of looking for life signals. Among all attributes, Raman spectroscopy is able to identify organic and inorganic compounds, either pure or in admixture, without requiring sample manipulation. In this study, we used Raman spectroscopy to examine the lichen Squamarina lentigera biomarkers. We analyse spectral signature changes after sample heating under different experimental situations, such as (a) laser, (b) analysis accumulations over the same spot and (c) environmental temperature increase. Our goal is to evaluate the capability of Raman spectroscopy to identify unambiguously life markers even if heating has induced spectral changes, reflecting biomolecular transformations. Usnic acid, chlorophyll, carotene and calcium oxalates were identified by the Raman spectra. From our experiments, we have seen that usnic acid, carotene and calcium oxalates (the last two have been suggested to be good biomarkers) respond in a different way to environmental heating. Our main conclusion is that despite their abundance in nature or their inorganic composition the resistance to heat makes some molecules more suitable than others as biomarkers.

It is well established that any properly conducted biophysical studies of proteins must take appropriate account of solvent. For water-soluble proteins it has been an article of faith that water is largely responsible for stabilizing the fold, a notion that has recently come under increasing scrutiny. Further, there are some instances when proteins are studied experimentally in the absence of solvent, as in matrix-assisted laser desorption/ionization or electrospray mass spectrometry, for example, or in organic solvents for protein engineering purposes. Apart from these considerations, there is considerable speculation as to whether there is life on planets other than Earth, where conditions including the presence of water (both in liquid or vapour form and indeed ice), temperature and pressure may be vastly different from those prevailing on Earth. Mars, for example, has only 0.6% of Earth's mean atmospheric pressure which presents profound problems to protein structures, as this paper and a large corpus of experimental work demonstrate. Similar objections will most likely apply in the case of most exoplanets and other bodies such as comets whose chemistry and climate are still largely unknown.

This poses the question, how do proteins survive in these different environments? In order to cast some light on these issues we have conducted a series of molecular dynamics simulations on protein dehydration under a variety of conditions. We find that, while proteins undergoing dehydration can retain their integrity for a short duration they ultimately become disordered, and we further show that the disordering can be retarded if superficial water is kept in place on the surface. These findings are compared with other published results on protein solvation in an astrobiological and astrochemical setting. Inter alia, our results suggest that there are limits as to what to expect in terms of the existence of possible extraterrestrial forms as well to what can be achieved in experimental investigations on living systems despatched from Earth. This finding may appear to undermine currently held hopes that life will be found on nearby planets, but it is important to be aware that the presence of ice and water are by themselves not sufficient; there has to be an atmosphere which includes water vapour at a sufficiently high partial pressure for proteins to be active. A possible scenario in which there has been a history of adequate water vapour pressure which allowed organisms to prepare for a future desiccated state by forming suitable protective capsules cannot of course be ruled out.

What is astrobiology? Which fields does it comprise and what makes an astrobiologist? Ask five scientists and you may end up with six different definitions. This issue was raised at the first symposium of the European network of Astrobiology Graduates (AbGradE), held last year in Edinburgh, when discussing whether the attendees’ fields of study were represented in the astrobiology community.

The ability to discriminate biogenic from abiogenic calcium carbonate (CaCO3) would be useful in the search for extant or extinct life, since CaCO3 can be produced by both biotic and abiotic processes on Earth. Bioprecipitated CaCO3 material was produced during the growth of heterotrophic microbial isolates on medium enriched with calcium acetate or calcium citrate. These biologically produced CaCO3, along with natural and synthetic non-biologically produced CaCO3 samples, were analysed by reflectance spectroscopy (0.35–2.5 μm), Raman spectroscopy (532 and 785 nm), and laser-induced fluorescence spectroscopy (365 and 405 nm excitation). Optimal instruments for the discrimination of biogenic from abiogenic CaCO3 were determined to be reflectance spectroscopy, and laser-induced fluorescence spectroscopy. Multiple absorption features in the visible light region occurred in reflectance spectra for most biogenic CaCO3 samples, which are likely due to organic pigments. Multiple fluorescence peaks occurred in emission spectra (405 nm excitation) of biogenic CaCO3 samples, which also are best attributed to the presence of organic compounds; however, further analyses must be performed in order to better determine the cause of these features to establish criteria for confirming the origin of a given CaCO3 sample. Raman spectroscopy was not useful for discrimination since any potential Raman peaks in spectra of biogenic carbonates collected by both the 532 and 785 nm lasers were overwhelmed by fluorescence. However, this also suggests that biogenic carbonates may be identified by the presence of this organic-associated fluorescence. No reliable spectroscopic differences in terms of parameters such as positions or widths of carbonate-associated absorption bands were found between the biogenic and abiogenic carbonate samples. These results indicate that the presence or absence of organic matter intimately associated with carbonate minerals is the only potentially useful spectral discriminator for the techniques that were examined, and that multiple spectroscopic techniques are capable of detecting the presence of associated organic materials. However, the presence or absence of intimately associated organic matter is not, in itself, an indicator of biogenicity.

The study of life remote in space has strong parallels with the study of life remote in time. Both are dependent on decoding those historic phenomena called ‘fossils’, here taken to include biogenic traces of activity and waste products. There is the shared problem of data restoration from incomplete data sets; the importance of contextual analysis of potentially viable habitats; the centrality of cell theory; the need to reject the null hypothesis of an abiogenic origin for candidate cells via morphospace analysis; the need to demonstrate biology-like behaviour (e.g., association with biofilm-like structures; tendency to form clusters and ‘mats’; and a preference for certain substrates), and of metabolism-like behaviour (e.g., within the candidate cell wall; within surrounding ‘waste products’; evidence for syntrophy and metabolic cycles; and evidence for metabolic tiers). We combine these ideas into a robust protocol for demonstrating ancient or extra-terrestrial life, drawing examples from Earth's early geological record, in particular from the earliest known freshwater communities of the 1.0 Ga Torridonian of Scotland, from the 1.9 Ga Gunflint Chert of Canada, from the 3.4 Ga Strelley Pool sandstone of Australia, and from the 3.46 Ga Apex Chert also of Australia.

The ability to differentiate abiotic organic material from material of a biological origin is a critical task for astrobiology. Mass spectrometry and spectroscopy provide key tools for advancing this task and are two techniques that provide useful and highly complementary compositional information independent of a specific biochemical pathway. Here we address some of the utility and limitations of applying these techniques to both orbital and in situ exploration of icy moons of the outer solar system.

Liquid water in comets, once considered impossible, now appears to be almost certain. New evidence has come from the discovery of clay minerals in comet Tempel 1, which compliments the indirect evidence in aqueous alteration of carbonaceous chondrites. Infrared spectral indication of clay is confirmed by modelling data in the 8–40 μm and 8–12 μm wavebands on the basis of mixtures of clays and organics. Radiogenic heating producing liquid water cores in freshly formed comets appears more likely on current evidence for solar system formation. A second possibility investigated here is transient melting in comets in the inner solar system, where thin crusts of asphalt-like material, formed due to solar processing and becoming hot in the daytime, can cause melting of sub-surface icy material a few centimetres deep. Supposing comets were seeded with microbes at the time of their formation from pre-solar material, there would be plenty of time for exponential amplification and evolution within the liquid interior and in the transient ponds or lakes formed as the outer layers are stripped away via sublimation.

A survey of the worldwide litterature reveals that the question “Are we alone in the Universe?” has been formulated only in the “western” litterature. Here I try to understand why it is so. To investigate this problem it is first necessary to clarify what western culture means.

This study was motivated by the fact that some amino acids are currently identified in carbonaceous chondrites but none are yet observed in the interstellar medium. The question of the relative stability of these prebiotic compounds with respect to the other possible species of the same chemical formula is addressed by means of quantum chemical simulations based on density functional theory (DFT). A preliminary investigation of molecules with the formula C2H5O2N shows that glycine (H2NCH2COOH) is not the most stable compound that can be formed: it is ~10 kcal mol−1 higher in energy than CH3NHCOOH, which becomes the most likely candidate for a search in space. The same argument of relative stability used to explained why formamide H2N-HC=O was identified in the interstellar medium (rather than any of its isomers) provides here a rationalization of the permanent debate about the detection of glycine. A second investigation of protonated derivatives of the same series that may result from ion molecule chemistry shows that under its nitrogen protonated form (H3N+CH2COOH) glycine does become the most stable compound. This suggests that, if glycine presently detected in chondrites has an interstellar origin, it must have been synthetized as its protonated form by ion–molecule processes. A similar study was carried out on the corresponding glycine N-carboxyanhydride. The calculated rotational constants (GHz) of glycine A=10.3603; B=3.8590; C=2.9037 (Exp: 10.3418; 3.8762; 2.9123, respectively) served as the benchmark to derive the correcting factors necessary to estimate the rotational constants of the possible candidates within a few tenths of a percent. The dipole moments were determined and the values in the range 4–6 Debye obtained for the protonated species should be large enough to initiate laboratory experiments and/or observations. Theoretical infrared spectra are also provided to assist in the identification of these exotic species.

A number of studies have demonstrated that bacteria and fungi are present in the stratosphere. Since the tropopause is generally regarded as a barrier to the upward movement of particles it is difficult to see how such microorganisms can reach heights above 17 km. Volcanoes provide an obvious means by which this could be achieved, but these occur infrequently and any microorganisms entering the stratosphere from this source will rapidly fall out of the stratosphere. Here, we suggest mechanisms by which microorganisms might reach the stratosphere on a more regular basis; such mechanisms are, however, likely only to explain how micrometre to submicrometre particles could be elevated into the stratosphere. Intriguingly, clumps of bacteria of size in excess of 10 μm have been found in stratospheric samples. It is difficult to understand how such clumps could be ejected from the Earth to this height, suggesting that such bacterial masses may be incoming to Earth. We suggest that the stratospheric microflora is made up of two components: (a) a mixed population of bacteria and fungi derived from Earth, which can occasionally be cultured; and (b) a population made up of clumps of, viable but non-culturable, bacteria which are too large to have originated from Earth; these, we suggest, have arrived in the stratosphere from space. Finally, we speculate on the possibility that the transfer of bacteria from the Earth to the highly mutagenic stratosphere may have played a role in bacterial evolution.

A simulation experiment with a complex bacterial soil community in a Mars simulation chamber was performed to determine the effect of Martian conditions on community activity, stability and survival. At three different depths in the soil core short-term effects of Martian conditions with and without ultraviolet (UV) exposure corresponding to 8 Martian Sol were compared. Community metabolic activities and functional diversity, measured as glucose respiration and versatility in substrate utilization, respectively, decreased after UV exposure, whereas they remained unaffected by Martian conditions without UV exposure. In contrast, the numbers of culturable bacteria and the genetic diversity were unaffected by the simulated Martian conditions both with and without UV exposure. The genetic diversity of the soil community and of the colonies grown on agar plates were evaluated by denaturant gradient gel electrophoresis (DGGE) on DNA extracts. Desiccation of the soil prior to experimentation affected the functional diversity by decreasing the versatility in substrate utilization. The natural dominance of endospores and Gram-positive bacteria in the investigated Mars-analogue soil may explain the limited effect of the Mars incubations on the survival and community structure. Our results suggest that UV radiation and desiccation are major selecting factors on bacterial functional diversity in terrestrial bacterial communities incubated under simulated Martian conditions. Furthermore, these results suggest that forward contamination of Mars is a matter of great concern in future space missions.

This paper looks at the possibility that the peptide bond may be more common than originally thought, leading to molecules of prebiotic interest containing heavier atoms of the second row of the periodic table. Ab initio Möller–Plesset (MP2) coupled-cluster molecular orbital methods and density functional theory have been used. A first investigation of the six-atom system [C,3H,O,N] showed that formamide, NH2[bond]CH[double bond]O, is the most stable system that can be formed. Systematic studies on this same system in which C, O and N were respectively replaced by Si, S and P were then carried out. It has been found that the peptide-like linkage is the most stable for [C,3H,S,N] and [Si,3H,O,N] where NH2[bond]CH[double bond]S and NH2[bond]SiH[double bond]O are about 10–14 kcal mol−1 more favourable than the corresponding enol tautomers and well below other isomers on the energy scale. For [C,3H,O,P], the most stable species is CH3[bond]P[double bond]O, which is found 18 kcal mol−1 below the PH2[bond]CH[double bond]O peptide analogue. By correcting the known inadequacies in the calculations with the average theoretical to experimental ratio from the benchmark molecules of the system, it is possible to obtain a best estimate of rotational constants and infrared frequencies that should be precise enough to initiate laboratory experiments and/or observations. The corrected values of B=6.0342 GHz and C=5.4921 GHz for NH2[bond]CH[double bond]S; B=9.2292 GHz and C=6.1164 GHz for NH2[bond]SiH[double bond]O; B=8.0275 GHz and C=6.4779 GHz for CH3[bond]P[double bond]O should be accurate to within a few tenths of a per cent. Theoretical infrared spectra are also provided to assist in identification of these exotic species.

The emergence and spread of chirality on the early Earth is considered by studying a set of reaction-diffusion equations based on a polymerization model. It is found that effective mixing of the early oceans is necessary to reach the present homochiral state. The possibility of introducing mass extinctions and modifying the emergence rate of life are discussed.

Reaction-diffusion equations based on a polymerization model are solved to simulate the spreading of hypothetic left and right-handed life forms on the Earth's surface. The equations exhibit front-like behavior as is familiar from the theory of the spreading of epidemics. It is shown that the relevant time scale for achieving global homochirality is not, however, the time scale of front propagation, but the much longer global diffusion time. The process can be sped up by turbulence and large scale flows. It is speculated that, if the deep layers of the early ocean were sufficiently quiescent, there may have been the possibility of competing early life forms with opposite handedness.

We have used 16S ribosomal genes to estimate the bacterial contents of Lake Vostok accretion ice samples at 3551 m and 3607 m, both containing sediment inclusions and formed 20000–15000 yr ago. Decontamination proved to be a critical issue, and we used stringent ice chemistry-based procedures and comprehensive biological controls in order to restrain contamination. As a result, up to now we have only recognized one 16S rDNA bacterial phylotype with confident relevance to the lake environment. It was found in one sample at 3607 m depth and represents the extant thermophilic facultative chemolithoautotroph Hydrogenophilus thermoluteolus of beta-Proteobacteria, and until now had only been found in hot springs. No confident findings were detected in the sample at 3551 m, and all other phylotypes revealed (a total of 16 phylotypes, 336 clones including controls) are presumed to be contaminants. It seems that the Lake Vostok accretion ice is actually microbe-free, indicating that the water body should also be hosting a highly sparse life. The message of thermophilic bacteria suggests that a geothermal system exists beneath the cold water body of Lake Vostok, what is supported by the geological setting, the long-term seismotectonic evidence from 4He degassing and the ‘18O shift’ of the Vostok accretion ice. The seismotectonic activity that seems to operate in deep faults beneath the lake could sustain thermophilic chemolithoautotrophic microbial communities. Such a primary production scenario for Lake Vostok may have relevance for icy planets and the approaches used for estimating microbial contents in accretion ice are clearly relevant for searching for extraterrestrial life.

We give an overview of an interdisciplinary meeting held last year in Windsor to discuss the evidence for fine-tuning in living systems. Many of the papers presented there appear in this volume, so this serves as an introduction to them. We also briefly review a meeting held the previous year in Cambridge to assess the evidence for fine-tuning in physics and cosmology.