Dormancy is a critical factor for the survival and persistence of weedy species. Contemporary approaches can be used to identify genes that regulate dormancy directly or indirectly to elucidate key mechanisms, signals, and pathways. Several domesticated plant species have been used as model systems to mark quantitative trait loci (QTL) that affect dormancy in seeds and vegetative propagules directly. A few weedy species have also been used to mark QTL and to determine dormancy genes using microarray analysis. Given the number of serious weeds worldwide and the role that dormancy plays in their persistence, developing fundamental knowledge on dormancy is an important step toward developing new strategies for weed management. This paper describes current research and outlines some weeds that might be candidates for dormancy investigations using molecular genetic and genomics approaches. An underlying theme in the selection of weeds for dormancy investigations is their relation to crop species and the ability to adapt existing resources to investigate dormancy in weedy plants.

A common sunflower population from Howard, SD (HSD) was previously determined to be cross-resistant to imazethapyr and chlorimuron-ethyl, both acetolactate synthase–inhibiting (ALS) herbicides. Experiments were conducted to determine if target-site polymorphisms could act as a mechanism of ALS-inhibitor herbicide resistance in the HSD common sunflower. Approximately 1,600 nucleotides were amplified by polymerase chain reaction and sequenced from putative ALS gene(s) in common sunflower and Jerusalem artichoke. In sunflower, two different amplification products were detected that differed by a nine-basepair deletion. This suggested the presence of at least two ALS genes in common sunflower that could contribute to the herbicide resistance phenotype. In addition, an Ala205 to Val205 substitution was observed in several clones from resistant common sunflower (amino acid position is relative to the full-length mouse-ear cress ALS protein). Previously documented mutations at this position in other species indicated that it might play a vital role in conferring resistance to one or more ALS-inhibitor herbicides.