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Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach

Published online by Cambridge University Press:  04 May 2021

Benjamin Durrington*
Affiliation:
Department of Integrative Biology, University of Texas at Austin, Austin, Texas, USA
Fiona Chong*
Affiliation:
Department of Biological & Marine Sciences, University of Hull, Hull, United Kingdom Energy and Environment Institute, University of Hull, Hull, United Kingdom
Daniel H. Chitwood*
Affiliation:
Department of Horticulture, Michigan State University, East Lansing, Michigan, USA Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, USA
*
Author for correspondence: D. Chitwood, E-mail: [email protected]

Abstract

Lateral organs arranged in spiral phyllotaxy are separated by the golden angle, ≈137.5°, leading to chirality: either clockwise or counter-clockwise. In some species, leaves are asymmetric such that they are smaller and curved towards the side ascending the phyllotactic spiral. As such, these asymmetries lead to mirroring of leaf shapes in plants of opposite phyllotactic handedness. Previous reports had suggested that the pin-stripe calathea (Goeppertia ornata) may be exclusively of one phyllotactic direction, counter-clockwise, but had limited sampling to a single population. Here, we use a citizen science approach leveraging a social media poll, internet image searches, in-person verification at nurseries in four countries and digitally-curated, research-grade observations to demonstrate that calatheas (Goeppertia spp.) around the world are biased towards counter-clockwise phyllotaxy. The possibility that this bias is genetic and its implications for models of phyllotaxy that assume handedness is stochastically specified in equal proportions is discussed.

Type
Citizen Science
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
Copyright
© The Author(s), 2021. Published by Cambridge University Press in association with The John Innes Centre

1. Introduction

Phyllotaxy is the arrangement of leaves and other lateral organs on a plant. The most common phyllotactic pattern is spiral, in which lateral organs are separated by the golden angle, ≈137.5°, derived from the Fibonacci sequence (Jean, Reference Jean2009; Prusinkiewicz & Lindenmayer, Reference Prusinkiewicz and Lindenmayer2012). We ascend the spiral of a plant starting at the base of the shoot axis where the oldest leaves are located and follow successively younger leaves up towards the shoot apex where the youngest leaves are initiating. Here, we refer to the phyllotactic direction (the chirality) of the ascending spiral as either clockwise or counter-clockwise (Figure 1). We use the term chirality for phyllotactic direction (either clockwise or counter-clockwise) to distinguish it from the asymmetry of leaves (left- or right-handed), which we refer to later, to avoid confusing distinct but interconnected phenomena. Another reason we use clockwise and counter-clockwise to describe phyllotactic chirality is because we are defining phyllotactic direction by ascending the phyllotactic spiral (whereas left- and right-handed helical conventions describe descending along spirals, see Edwards et al., Reference Edwards, Moles and Franks2007). Early studies across numerous, diverse plant species not only found that the ratio of clockwise and counter-clockwise individuals in a population tend to be 50:50 (De Vries, Reference De Vries1903; Koriba, Reference Koriba1914; Ikeno, Reference Ikeno1923), but also that phyllotactic direction is not heritable (Imai, Reference Imai1927). Although not spiral phyllotaxy, a special case of seeds from alternating rows of maize ears and other grass inflorescences producing seedlings in which the left or right side of the first leaf would overlap the other was reported by Compton (Reference Compton1912). In this case, too, phyllotactic direction is not heritable and the result of developmental circumstance (i.e., which alternating row the seed is found on the ear determining leaf overlap in the seedling). Another potential influence on phyllotactic direction is the environment. Considering phyllotactic direction in a number of herbaceous and woody species in the South Atlantic region of the United States, Allard (Reference Allard1951) found that overall results tended towards a 50:50 ratio in aggregate. However, in keeping track of the same species sampled in different locations or times a number of sub-samples significantly deviated from a 50:50 ratio, at odds with the overall results. Even when performed correctly, the interpretation of statistical results can yield false positives or represent under-sampled environmental effects. Especially when untangling genetic and environmental effects, it is imperative that sampling is broad and robust to avoid spurious conclusions.

Fig. 1. Phyllotactic leaf asymmetry. Phyllotactic chirality, either clockwise (orange) or counter-clockwise (blue), is determined ascending the phyllotactic spiral from the base of the plant to its tip. In clockwise phyllotaxy, the ascending (anodic) side (magenta) of the leaf is right and the descending (cathodic) side (purple) of the leaf is left, while in counter-clockwise the relationship is reversed. Because the incipient leaf (P0) is an auxin sink while older primordia (such as P1) are auxin sources, the descending side of the leaf is exposed to higher auxin levels, leading to leaf asymmetries that manifest on opposite sides of leaves in clockwise and counter-clockwise phyllotaxy. Note that leaf asymmetry, which is either left- or right-handed, is distinct from phyllotactic chirality (clockwise or counter-clockwise). Leaf asymmetry is a consequence of phyllotactic chirality, but it is a distinct morphological phenomenon. Hence, we refer to right-handed leaves arising from clockwise phyllotaxy and vice versa.

Spiral phyllotactic handedness impacts asymmetry at an organismal level through the same mechanism by which phyllotaxy itself arises: the plant hormone auxin (Kuhlemeier, Reference Kuhlemeier2007). Other mechanisms besides auxin, notably microtubules and cell wall composition, affect chirality at an organismal level as well. In the case of microtubules, the handedness of cortical microtubules guides the directionality of cellulose microfibrils, leading to right-handed cell twisting that propagates to the organismal level (Furutani et al., Reference Furutani, Watanabe, Prieto, Masukawa, Suzuki, Naoi and Hashimoto2000; Thitamadee et al., Reference Thitamadee, Tuchihara and Hashimoto2002; Buschmann et al., Reference Buschmann, Fabri, Hauptmann, Hutzler, Laux, Lloyd and Schäffner2004); whereas in a microtubule-independent manner, rhamnose-containing cell wall polymers suppress left-handed helical twisting in petals and roots (Saffer et al., Reference Saffer, Carpita and Irish2017; Saffer & Irish, Reference Saffer and Irish2018). Unlike the aforementioned mechanisms, only auxin links leaf asymmetry with phyllotactic direction. Auxin is sufficient to direct the location of leaf primordium initiation (Reinhardt et al., Reference Reinhardt, Mandel and Kuhlemeier2000). When considered with the intracellular localization of the auxin efflux carrier PIN-FORMED1 (PIN1) within the shoot apical meristem (Reinhardt et al., Reference Reinhardt, Pesce, Stieger, Mandel, Baltensperger, Bennett and Kuhlemeier2003) that directs auxin towards neighbouring cells with high auxin concentrations (Benková et al., Reference Benková, Michniewicz, Sauer, Teichmann, Seifertová, Jürgens and Friml2003), computational modelling can recapitulate spiral phyllotactic patterning (Smith et al., Reference Smith, Guyomarc'h, Mandel, Reinhardt, Kuhlemeier and Prusinkiewicz2006). Similar mechanisms of self-organization directed by auxin and PIN1 operate after leaf initiation, patterning venation (Scarpella et al., Reference Scarpella, Marcos, Friml and Berleth2006), the margin (Bilsborough et al., Reference Bilsborough, Runions, Barkoulas, Jenkins, Hasson, Galinha and Tsiantis2011) and leaflets (Koenig et al., Reference Koenig, Bayer, Kang, Kuhlemeier and Sinha2009). A fundamental relationship between leaf primordia and auxin efflux leading to spiral patterning is that the incipient leaf (P0, plastochron 0) acts as an auxin sink and that older primordia (such as the neighbouring next oldest leaf primordium, P1) are auxin sources. Because of the handedness of spiral phyllotaxy, the ascending (anodic) side of the P0 (closer to the shoot apical meristem) might receive less auxin than the descending (cathodic) side (away from the shoot apical meristem and closer to the P1) because of the proximity of the P1, an auxin source (Figure 1). Considering the effects of auxin on leaf venation and margin development, the above scenario might create morphological asymmetries in the mature leaf. Because the ascending side of the leaf is the right-hand side in clockwise phyllotaxis and the left-hand side in counter-clockwise phyllotaxis, such asymmetry would be expected to manifest as mirror images in plants with opposite phyllotactic directions (Figure 1). Morphometric analysis of tomato and Arabidopsis leaves, auxin localization in leaf primordia and their curvature and computational modelling of auxin asymmetries in the shoot apical meristem all confirm auxin-dependent mirroring of leaf asymmetry arising from opposite phyllotactic directions (Chitwood et al., Reference Chitwood, Headland, Ranjan, Martinez, Braybrook, Koenig and Sinha2012a).

Independent of the above auxin-based mechanism and subtle statistical morphometric leaf asymmetries, Korn (Reference Korn2006) described easily observable morphological features that corresponded with the ascending (anodic) side of leaves, and thus phyllotactic direction. In Syngonium podophyllum, the midrib curves and leaf coils towards the ascending side of the leaf; in Acalypha virginica, the axillary bud on the ascending side is smaller than the descending side; in Croton variegatus ‘Banana’, a secondary blade is only initiated on the ascending side of leaves; and in Aglaonema crispum, the smaller half of the leaf is ascending (Korn, Reference Korn2006). As the ascending side is the right side of the leaf in clockwise phyllotaxis and the left side in counter-clockwise phyllotaxis, phyllotactic direction was also recorded. All of the above species had plants with shoot apices of both phyllotactic directions (i.e., both clockwise and counter-clockwise phyllotactic chirality were present among plants). Leaf asymmetry was also described for Goeppertia ornata (referred to as Calathea ornata in Korn, Reference Korn2006), in which the ascending side of leaves was smaller than the descending side. Remarkably, of the 26 shoots examined arising from nine plants, all were counter-clockwise (Korn, Reference Korn2006). Assuming a null hypothesis of a 50:50 ratio, the p-value of all 26 shoots displaying counter-clockwise phyllotaxy is 3.414 × 10−7 and 0.0027 for all nine plants (Chi-squared goodness of fit test). If all shoots are of the same phyllotactic handedness, then any leaf asymmetries will be exclusively restricted to the same physical side. Korn (Reference Korn2006) reports all 132 leaves from the 26 shoots examined having smaller ascending sides, which together with the knowledge that all shoots were counter-clockwise means that it was exclusively the left sides of the G. ornata (C. ornata, Korn, Reference Korn2006) leaves that were smaller than the right side. This report of exclusive counter-clockwise handedness in a species—with strong effects on leaf asymmetry—has important implications for phyllotactic theory, in which the null hypothesis assumes that spiral phyllotaxy is stochastically patterned in a 50:50 ratio.

Here, we leverage a citizen science approach to see if indeed calatheas (Goeppertia spp.) are biased towards a counter-clockwise phyllotactic direction. Using the popularity of calatheas as houseplants and social media, we initiated a Twitter poll to which 105 people responded. The results of the poll showed a strong bias of calathea plants exhibiting counter-clockwise compared to clockwise phyllotaxy, as inferred from the handedness of leaf shape. To verify the results beyond the poll, we undertook a number of approaches. First, we examined plants from Google image searches of calathea species and scored phyllotactic direction based on the appearance of leaves. Next, we verified phyllotactic direction in nurseries across four different countries and two continents. Finally, using research-grade photos collected from citizen scientists from iNaturalist obtained through the Global Biodiversity Information Facility (GBIF) we further verify that the bias in phyllotactic direction extends across the world and to calatheas growing in natural populations. Together, our results demonstrate that cultivated calatheas (and likely natural populations, too) exhibit a strong bias in phyllotactic direction, across numerous independent observations across the world and upon personal verification by the authors. Hypotheses regarding the origin of the bias are discussed, with implications for a possible genetic origin of phyllotactic handedness in calatheas.

2. Materials and methods

While referring to our study taxa, we aim to reflect the most recent taxonomic changes and promote ease of use. Calathea, as formerly defined, is polyphyletic, and was recently split into two main groups (Borchsenius et al., Reference Borchsenius, Suárez and Prince2012). One clade (Calathea II) is more closely related to Ischnosiphon than the rest of Calathea, and retains the generic name. A second clade (Calathea I), including all of our study species, is now included in the genus Goeppertia. We still refer to these generally as ‘calatheas’ here and in the Twitter poll in order to facilitate name recognition but adopt the most recent binomials throughout (Table 1).

Table 1 A list of our study taxa in its old classification under the genus Calathea, and their new and correct binomial nomenclature after Borchsenius et al. (Reference Borchsenius, Suárez and Prince2012)

A Twitter poll was initiated July 20, 2020. An explanatory figure was posted with the poll that asked readers ‘Is your Calathea a Lefty or a Righty?’, showing example calathea leaves of each hand (Figure 2a). The leaf images were taken from Korn (Reference Korn2006), with attribution stating that the figure had been modified by reflection for demonstration (the left-handed images were the original image; the right-handed leaves were modified by reflection). Left and right-handed designations were selected to make it easier for the public to determine the handedness of their leaves and do not correspond to helical conventions of handedness (and in fact, they can be interpreted as opposite of helical conventions of left and right used for the twining of vines; e.g., see Edwards et al., Reference Edwards, Moles and Franks2007). Using left- and right-handed to describe leaf asymmetry also separates these terms from phyllotactic chirality, for which we reserve clockwise and counter-clockwise, for clarity (Figure 1). Hence, we refer to right-handed leaves arising from clockwise phyllotaxy and vice versa. Left-handed leaves lend themselves to such a label and were described as ‘Left side smaller’ and ‘Leaf curved towards left’ with corresponding arrows pointing left. The poll itself reiterated the description of right- and left-handed leaves (Figure 2b). Participants in the poll could respond ‘My plant is left-handed’, ‘My plant is right-handed’, or ‘Neither of the above’. The poll lasted for 1 week, after which it was closed, and results were made publicly available.

Fig. 2. Twitter poll and results. (a) Diagram showing poll participants example calathea leaves to orient them to leaf handedness. This figure was modified by reflection from the original figure of Korn (Reference Korn2006) for demonstration (left-handed leaf images are the original images; right-handed leaf images have been reflected). A note of the modification from Korn (Reference Korn2006) was made in the original image (bottom left hand corner). (b) Final poll results, made public after the poll ran for a week, are shown.

To verify the Twitter poll results, calathea images from Google image search were used by the authors (Figure 3). Five calathea species (that are popular as houseplants) were queried: G. lancifolia, G. makoyana, G. orbifolia, G. ornata and G. roseopicta. The first 50 non-redundant images from the search were saved and the links from where they originated were recorded. Images of Aloe polyphylla were similarly curated as a control. The three authors scored each image as −1, 0, +1 for left-handed, neither or right-handed, respectively. ‘Neither’ is a category that encompasses plants with both left- and right-handed leaves in equal ratios, leaves that do not have handedness, or plants where left- or right-handed determination could not be made for any number of reasons. The three scores were averaged. A. polyphylla images were scored once and not averaged as phyllotactic handedness was obvious.

Fig. 3. Google image search results. The first 50 images for each species (G. lancifolia, G. makoyana, G. orbifolia, G. ornata and G. roseopicta) by Google image search were scored for handedness as left (−1), neither (0) or right (+1) by each of the three authors and averaged. Shown are the counts for each species for each averaged score. Colors indicating each species are provided in legend.

In-person verification of plants was undertaken by the authors by examining calathea plants at local nurseries. All available calathea plants at each location were examined and a photo was taken with a marker to ensure that manipulation by reflection had not taken place. Each author scored the respective plants they examined as −1, 0, +1 for left-handed, neither and right-handed, respectively. Plants were examined in nurseries at the following locations: La Tinaja, Guanajuato Mexico (Vivero de La Tinaja; 20.489814, −101.212225); Hull, UK (Plant & Paint; 53.73944985, −0.333975936); Brussels, Belgium (Dille & Kamille, Brussel Grasmarkt; 50.84788842, 4.35271669); Austin, Texas, USA (Tillery Street Plant Co.; 30.26114649, −97.70419208) (Figures 4 and 5 , Table 1 ). The number of plants and species at each location was as follows: Mexico, 28 plants total, 8 G. makoyana, 14 G. ornata, 5 G. picturata, 1 G. zebrina; United Kingdom, 106 plants total, 6 G. concinna, 15 G. lancifolia, 4 G. louisae, 31 G. majestica, 6 G. orbifolia, 1 G. ornata, 7 G. picturata, 23 G. roseopicta, 2 G. rufibarba, 1 G. warscewiczii, 10 G. zebrina; Belgium, 8 plants total, 4 G. concinna, 1 G. ornata, 2 G. roseopicta, 1 G. rufibarba; United States, 17 plants total, 16 G. louisae ‘Maui Queen’, 1 G. zebrina.

Fig. 4. Phyllotactic chirality in nursery-inspected plants and iNaturalist observations. Numbers of Goeppertia species (vertical axis) with left- (L), neither (N) or right-handedness (R) at four different nursery locations and citizen scientist iNaturalist observations across the world downloaded through GBIF (horizontal axis). Color intensity (purple) indicates the number of plants (indicated by text).

Fig. 5. Locations of observations used in this study. A world map showing the locations of the four nurseries calathea plants were inspected by the authors (orange points) and the 56 locations of iNaturalist observations made by citizen scientists (blue points). The locations of 3,768 GBIF occurrences with coordinates are plotted as small black points with a corresponding density heat map to indicate where Goeppertia Nees occurrences are most prevalent in the native range (Central and South American and the Caribbean).

Digitally-curated, research-grade photos taken from around the world by citizen scientists through iNaturalist were obtained through the GBIF. iNaturalist photos available through GBIF are ‘research-grade’, meaning there is a photo, date and coordinates for the occurrence and that the community agrees on an identification (Ueda, Reference Ueda2020). Although cultivated calatheas are present, unlike the Twitter poll, Google image searches and nursery inspections the GBIF data allow access to calatheas grown in the wild. To verify the range distribution of wild-growing calatheas, all instances of ‘Goeppertia Nees’ (including iNaturalist photos, herbarium specimens and other occurrences) were downloaded from GBIF (GBIF.org, December 30, 2020). 3,768 occurrences with coordinates (excluding data points from null island and in the Arctic ocean) were plotted (Figure 5) showing the vast majority of samples falling within the native range of Goeppertia species in Central and South America. Fifty-six iNaturalist photos of calathea plants in natural environments downloaded through GBIF were scored for phyllotactic chirality (Figure 4). The number of photos of each species is as follows: 22 G. zebrina, 22 G. ornata, 4 G. warscewiczii, 2 G. majestica, 2 G. makoyana, 1 G. roseopicta, 1 G. louisae, 1 G. picturata, 1 G. rufibarba. The number of photos from each country is as follows: 13 Costa Rica, 11 Peru, 7 Ecuador, 4 Panama, 3 Brazil, 2 Colombia, 2 Trinidad and Tobago, 2 Mexico, 2 Malaysia, 2 Singapore, 1 Guyana, 1 Nicaragua, 1 Puerto Rico, 1 Hong Kong, 1 India, 1 Indonesia, 1 Réunion, 1 Seychelles. In total, 45 out of 56 photos (80.4%) are from Central and South America (excluding Mexico) or the Caribbean.

Statistical analyses were performed in R (R Core Team, 2019). All visualizations were made using ggplot2 (Wickham, Reference Wickham2016). For tests of bias in handedness from Korn (Reference Korn2006), the Twitter poll, nursery inspections and iNaturalist observations, Chi-squared goodness of fit test was used with the chisq.test() function. For the Google image search results, a two-tailed Wilcoxon signed rank test was used with the wilcox.test() function.

3. Results

The Twitter poll yielded 105 responses: 49.5%, 52 responses ‘My plant is left-handed’; 10.5%, 11 responses ‘My plant is right-handed’; 40%, 42 responses ‘Neither of the above’ (Figure 2b). Disregarding ‘Neither of the above’ responses and testing against a null hypothesis of 50:50 left-to-right handed, Chi-squared goodness of fit test rejects the null hypothesis (p = 2.398 × 10−7).

For the scoring of handedness from Google image search results, five species with 50 images each were scored and averaged between the three authors (Figure 3). A two-sided Wilcoxon signed rank test was used to test the null hypothesis that the average of the distribution for each species was 0 (neither). For each species, the null hypothesis was rejected with the following p-values: G. lancifolia, p = 1.808 × 10−9; G. makoyana, p = 3.885 × 10−10; G. orbifolia, p = 1.931 × 10−8; G. ornata, p = 2.041 × 10−9; G. roseopicta, p = 4.879 × 10−10. The distributions for each species were heavily skewed towards −1, indicating left-handed leaf asymmetry and counter-clockwise phyllotactic chirality. A. polyphylla was used as a control to ensure that images downloaded from the internet had not been reflected. The phyllotactic direction in this species is obvious and images were qualitatively scored as clockwise (28 images) and counter-clockwise (22 images). A Chi-squared goodness of fit test does not reject the null hypothesis of a 50:50 ratio (p = .3961).

Handedness of plants was verified in person at nurseries in four countries (Figures 4 and 5; Table 1). Because the authors could verify plant handedness in person, each plant was simply scored as left-handed (−1), neither (0), or right-handed (+1). A Chi-squared test was used with a null hypothesis assuming equal proportions of each category. In all locations the null hypothesis was rejected: La Tinaja, Gto. Mexico, n = 28 and p = 9.592 × 10−7; Hull, UK, n = 106 and p = 8.689 × 10−16; Brussels, Belgium, n = 8 and p = .0003355; Austin, Texas, USA, n = 17 and p = .01365. If plants at all locations are combined, 159 plants were measured with a p-value of 4.034227 × 10−25. Overall, 109 plants were scored as left-handed, 50 as neither and 0 as right-handed.

Research-grade citizen scientist photos from iNaturalist (Ueda, Reference Ueda2020) of calathea plants from around the world were downloaded through the GBIF (GBIF.org, December 30, 2020) (Figure 5). Photos were scored the same as the nursery inspections: left-handed (−1), neither (0) or right-handed (+1) (Figure 4). A Chi-squared test was used with a null hypothesis assuming equal proportions of each category. Of the 56 photos, 46 were scored as left-handed, 10 as neither and 0 as right-handed. The null hypothesis was rejected: n = 56, p = 2.408605 × 10−14.

4. Discussion

The Twitter poll provided a global platform to sample truly independent responses (Figure 2). Respondents did not know the results of the poll before they responded, and once results were publicized, the poll closed. There was no way respondents could be biased by previous responses. Unlike a common garden experiment in which local environmental effects are highly controlled for but the extrapolation of results to different environments is limited, the Twitter poll results are globally sampled. Each respondent purchased or propagated and grew their calathea plant in a truly unique environment. For an easy to measure, qualitative trait, such a poll allows for a robust survey of the overall proportion of handedness in calatheas from numerous, independent sources across the world. Nonetheless, there are caveats. Although strong leaf asymmetry and clear instructions make it easy to infer phyllotactic direction, participants may have made mistakes, or at worst fabricated results. In the case of fabrication, the question is such that responses would be random (there is no reason to select one response over another). Twitter users that wanted to see results without participating may have voted for either ‘Neither of the above’ or ‘My plant is left-handed’/‘My plant is right-handed’ with equal probability. Compared to results from the Google image search, in-person inspection of plants at nurseries by the authors, and a survey of iNaturalist photos from citizen scientists, the Twitter poll has an exceptionally high proportion of responses for ‘neither’ (40%) as well as the ratio of right-to-left handed (17.5:82.5), indicating that more than likely responses to these categories are inflated. By discounting the ‘neither’ responses altogether and focusing on testing the ratio of right-to-left against a null hypothesis of 50:50, the null hypothesis is rejected (p = 2.398 × 10−7). This result is likely robust, as the above-mentioned sources of error act to support the null hypothesis, not the alternative.

Three methods were used to verify the Twitter poll result. The first was Google image searches of specific calathea species (Figure 3). This method still relies on others taking photos of plants and assumes that the photos have not been reflected. Like the Twitter poll, it should be noted that the source of error (the photographer reflecting the photo) works in support of the null hypothesis, not the alternative. Additionally, the A. polyphylla results indicate that, at least for this species, reflection did not affect the observed ratio of 50:50 in phyllotactic handedness. Unlike the Twitter poll, the authors themselves scored each of the images, averaging across their responses (−1 for left, 0 for neither and +1 for right). The null hypothesis that the mean of the distribution was zero was rejected for each species, and there was a strong left-handed bias for each species. The second method to verify results was in-person visits by each of the authors to nurseries across four countries and two continents (Figures 4 and 5, Table 1). Here, the authors could rely on their own expertise to score the plants. Among 159 plants, none were scored as right-handed and all were scored as either left-handed or neither. The third method to verify results was by examining research-grade photos from citizen scientists through iNaturalist and GBIF (Ueda, Reference Ueda2020; GBIF.org, December 30, 2020). The most important advantages of this method compared to the others are accessible coordinate data and inclusion of both wild and cultivated calatheas. The vast majority of GBIF occurrences for Goeppertia Nees fall within the native range of calatheas, and approximately 80% of the 56 examined photos fall within the native range as well (Figure 5). Among the 56 photo observations, none were scored as right-handed and all were scored as either left-handed or neither, similar to the nursery inspection results (Figure 4).

Together the original results of Korn (Reference Korn2006), the Twitter poll, scoring of images from Google image search, and in person inspection of nursery plants, we conclude that leaves in cultivated calatheas throughout the world are highly skewed to left-handed, indicating counter-clockwise phyllotaxy. Considering the research-grade photos from iNaturalist citizen scientists, we also believe that it is highly probable calathea plants in the wild are highly skewed to left-handed, indicating counter-clockwise phyllotaxy, but this statement requires further investigation. We only reject (strongly) the null hypothesis that the ratio of clockwise to counter-clockwise is 50:50 in calatheas, as with the present data we cannot support the hypothesis that phyllotaxy in calatheas is exclusively counter-clockwise.

Besides the original report by Korn (Reference Korn2006) of exclusive phyllotactic direction in G. ornata (C. ornata), another report is in banana (Musa; Skutch, Reference Skutch1927; Reference Skutch1930) where it is reported to be clockwise: ‘The spiral in which the leaves are arranged is always left-handed; it rises from the right to the left of an observer facing the stem’ (Skutch, Reference Skutch1927). As an effect of the fixed phyllotactic direction, leaf morphology is impacted as well: ‘Every banana leaf I have ever examined closely was rolled in the same way, the right half covered by the left’ (Skutch, Reference Skutch1930). These statements need to be verified, similar to those for calatheas here, and there is at least one published work with illustrations of leaf asymmetry of both hands contradicting this claim (Argent, Reference Argent1976). Interestingly it is indicated that exclusive phyllotactic direction is diagnostic of different banana species. If true, it is suspicious that Goeppertia and Musa are both members of the Zingiberales. One hypothesis is that because of rhizomatous growth and propagation by division, biased phyllotactic handedness is preserved through propagation of limited wild collections of these taxa. However, most commercial calathea and banana propagation is now through tissue culture (Banerjee & de Langhe, Reference Banerjee and de Langhe1985; Chen & McConnell, Reference Chen and McConnell2006). Considering the production of shoot apical meristems de novo during tissue culture, it is expected that phyllotactic direction would be reset. Further, seed propagation in calatheas is possible and does occur. Finally, as described by a major distributor of calatheas in Europe, Gebr. Valstar, horticultural collections of wild Calathea are regularly made during expeditions to Brazil, providing new material for production and breeding new cultivars (https://www.thursd.com/growers/gebr-valstar/, accessed December 31, 2020). It is unlikely that so many species and varieties would exhibit strong phyllotactic biases in the same direction as observed here simply because of chance, limited collection from wild populations, or the way they are propagated. A genetic mechanism specifying the bias in phyllotactic direction is more likely.

A genetic bias in handedness is not unprecedented. Twining in vines is predominantly counter-clockwise (right-handed helices; Edwards et al., Reference Edwards, Moles and Franks2007). Similar to Goeppertia, this bias is observed throughout the world, indicating a strong genetic component independent of environment. Another example of directional asymmetry is Alstroemeria, in which the resupinate leaves exclusively twist in a counter-clockwise direction. The phyllotactic ratio is unaffected and 50:50 in Alstroemeria, but leaves from clockwise phyllotactic plants are smaller than those from counter-clockwise plants, perhaps due to conflict arising between counter-clockwise resupination and clockwise phyllotaxy (Chitwood et al., Reference Chitwood, Naylor, Thammapichai, Weeger, Headland and Sinha2012b). There is also a molecular basis for directional asymmetries, where microtubule mutants and mutations affecting the composition of the cell wall in Arabidopsis create directional helices, but phyllotactic direction is not impacted (Furutani et al., Reference Furutani, Watanabe, Prieto, Masukawa, Suzuki, Naoi and Hashimoto2000; Hashimoto, Reference Hashimoto2002; Thitamadee et al., Reference Thitamadee, Tuchihara and Hashimoto2002; Buschmann et al., Reference Buschmann, Fabri, Hauptmann, Hutzler, Laux, Lloyd and Schäffner2004; Saffer et al., Reference Saffer, Carpita and Irish2017; Saffer & Irish, Reference Saffer and Irish2018). This is despite a connection between microtubules and phyllotaxy (Heisler et al., Reference Heisler, Hamant, Krupinski, Uyttewaal, Ohno, Jönsson and Meyerowitz2010). If genetic, the fixed phyllotactic handedness in Goeppertia (and potentially other members of Zingiberales) is singularly unique. Across disparate species, phyllotaxy is reported to occur equally in opposite directions (De Vries, Reference De Vries1903; Koriba, Reference Koriba1914; Ikeno, Reference Ikeno1923; Imai, Reference Imai1927), a non-heritable trait that is stochastically determined. The widespread bias in independently grown calathea plants across the world reported here from citizen scientists, which verify the original observations by Korn (Reference Korn2006), demonstrate unknown mechanisms at play, and that current models of phyllotaxy are incomplete.

Acknowledgements

FC thanks Lara Roberts from Plant & Paint (Hull, UK) for supplying calathea plants for photographing. The authors thank reviewers for insightful and constructive comments that improved the quality of the manuscript.

Financial support

This project was supported by the USDA National Institute of Food and Agriculture, and by Michigan State University AgBioResearch.

Conflict of interest

The authors declare no conflicts of interest.

Authorship contributions

DHC conceived the study. BD, FC and DHC designed the study. BD, FC and DHC conducted data gathering and phenotyping. Twitter Calathea Poll Participants and iNaturalist citizen scientists provided data. DHC performed statistical analyses. BD, FC and DHC wrote, edited and reviewed the manuscript.

Data availability statement

All data, code and photos (from Google image searches, in-person nursery inspections by the authors and iNaturalist/GBIF citizen science photos) necessary to reproduce this work can be found on figshare at https://doi.org/10.6084/m9.figshare.13140434.v1 (containing original data) and https://doi.org/10.6084/m9.figshare.13513176.v1 (containing revised results).

Footnotes

Benjamin Durrington and Fiona Chong contributed equally to the manuscript.

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Figure 0

Fig. 1. Phyllotactic leaf asymmetry. Phyllotactic chirality, either clockwise (orange) or counter-clockwise (blue), is determined ascending the phyllotactic spiral from the base of the plant to its tip. In clockwise phyllotaxy, the ascending (anodic) side (magenta) of the leaf is right and the descending (cathodic) side (purple) of the leaf is left, while in counter-clockwise the relationship is reversed. Because the incipient leaf (P0) is an auxin sink while older primordia (such as P1) are auxin sources, the descending side of the leaf is exposed to higher auxin levels, leading to leaf asymmetries that manifest on opposite sides of leaves in clockwise and counter-clockwise phyllotaxy. Note that leaf asymmetry, which is either left- or right-handed, is distinct from phyllotactic chirality (clockwise or counter-clockwise). Leaf asymmetry is a consequence of phyllotactic chirality, but it is a distinct morphological phenomenon. Hence, we refer to right-handed leaves arising from clockwise phyllotaxy and vice versa.

Figure 1

Table 1 A list of our study taxa in its old classification under the genus Calathea, and their new and correct binomial nomenclature after Borchsenius et al. (2012)

Figure 2

Fig. 2. Twitter poll and results. (a) Diagram showing poll participants example calathea leaves to orient them to leaf handedness. This figure was modified by reflection from the original figure of Korn (2006) for demonstration (left-handed leaf images are the original images; right-handed leaf images have been reflected). A note of the modification from Korn (2006) was made in the original image (bottom left hand corner). (b) Final poll results, made public after the poll ran for a week, are shown.

Figure 3

Fig. 3. Google image search results. The first 50 images for each species (G. lancifolia, G. makoyana, G. orbifolia, G. ornata and G. roseopicta) by Google image search were scored for handedness as left (−1), neither (0) or right (+1) by each of the three authors and averaged. Shown are the counts for each species for each averaged score. Colors indicating each species are provided in legend.

Figure 4

Fig. 4. Phyllotactic chirality in nursery-inspected plants and iNaturalist observations. Numbers of Goeppertia species (vertical axis) with left- (L), neither (N) or right-handedness (R) at four different nursery locations and citizen scientist iNaturalist observations across the world downloaded through GBIF (horizontal axis). Color intensity (purple) indicates the number of plants (indicated by text).

Figure 5

Fig. 5. Locations of observations used in this study. A world map showing the locations of the four nurseries calathea plants were inspected by the authors (orange points) and the 56 locations of iNaturalist observations made by citizen scientists (blue points). The locations of 3,768 GBIF occurrences with coordinates are plotted as small black points with a corresponding density heat map to indicate where Goeppertia Nees occurrences are most prevalent in the native range (Central and South American and the Caribbean).

Author comment: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R0/PR1

Comments

Dear Editors of Quantitative Plant Biology,

Please find submitted the manuscript “Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): a citizen science approach” by Benjamin Durrington, Fiona Chong, Dan Chitwood, and the Twitter Calathea Poll Participants as a Citizen Science Article to Quantitative Plant Biology.

Spiral phyllotaxy is assumed to occur in roughly a 50:50 clockwise to counterclockwise ratio across plants. This assumption has been tested numerous times in old literature across species and locations and phyllotactic direction has been shown not to be heritable. Korn (2006) found that when leaves are asymmetric, the side to which they curve and are smaller on tends to be on the ascending (anodic) side of the genetic spiral (such that leaves are smaller on the right side in clockwise phyllotaxy and vice versa). In most species, the side of the leaf on which the asymmetry presents itself is 50:50, following the direction of the phyllotactic handedness of the plant. One exception Korn noted was Goeppertia ornata (previously Calathea ornata), in which the 26 shoots for the 9 plants he examined were all counterclockwise in direction. If calathea plants were exclusively or biased towards counterclockwise phyllotaxy, it would indicate a potential example in which phyllotactic direction is genetically specified.

Here, we verify the results of Korn using a citizen science approach. A twitter poll with over 105 independent responses from around the world, verification of phyllotactic direction using leaf asymmetry in 250 photographs from five Goeppertia species from a google image search, and in-person verification of phyllotactic direction by the authors in 13 species from four countries and two continents in which not a single clockwise phyllotactic plant among 159 specimens was detected, all point to a strong phyllotactic bias across calatheas that deviates from a 50:50 ratio. Because a role of environment cannot be discounted, the broad, global sampling enabled using social media and internet-based citizen approaches produces a robust result that demonstrates a genetic basis for phyllotactic handedness. As current phyllotactic models assume that spiral phyllotactic direction is not genetically but stochastically specified, our results point to a previously unconsidered phenomenon that has implications for the understanding of phyllotaxy in general. We believe for this reason this manuscript is uniquely qualified for the Citizen Science article type in Quantitative Plant Biology, as the robustness of the result is derived from hundreds of independent samples from around the world, reported by citizen scientists.

All data, code, and images used in this manuscript can be found at figshare at https://figshare.com/articles/dataset/Directional_phyllotactic_bias_in_Calathea_spp_Marantaceae_a_citizen_science_approach/13140434

We would like to recommend the following reviewers:

Joyce Chery (Cornell, [email protected]), because of her expertise in twining and plant asymmetry

Chelsea Specht (Cornell, [email protected]), because of her expertise in Zingiberales phyllotaxy

Siobhan Braybrook (UCLA, [email protected]), because of her expertise in phyllotaxy-derived leaf asymmetry

Thank you for your consideration, on behalf of the authors,

Dan Chitwood

References:

Korn, R. W. (2006). Anodic asymmetry of leaves and flowers and its relationship to phyllotaxis. Annals of Botany, 97(6), 1011-1015.

Review: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R0/PR2

Conflict of interest statement

Reviewer declares none.

Comments

Comments to Author: L65- Is “genetic” necessary?

L76- developmental constraint on what?

L89- In really enjoyed the discussion about auxin, and I think the introduction would be strengthened by adding in key references from the robust literature of handedness from Arabidopsis which has identified that the chirality of the cortical microtubules, guide the directionality of the cellulose microfibrils, directing cell expansion, and ultimately chirality. Mutants such as spr1-3, spr1-6, spr2-2, tua4, tua5 highlight the significance of MTs, while rhm1-3, rhm1-2 highlight the role of the cell wall composition in determining chirality.

Figure1. I think its logical to separate the chirality of phyllotaxy from the handedness of the leaves, as these are separate issues, however this terminology is confusing because chirality is usually poses are either left or right handed. To mitigate the potential of confusion, please be explicit in the text and in the caption that you are describing two separate processes. Perhaps using the same terminology would help, for example: left-handed phytollotaxy + right handed leaves

L130- Do you mean each of those species are variable (have both L and R chirality)?

L170- Deeply appreciate the taxonomic history!

L175- Ah yes, this would be a good place to be super clear that you used r and l handed leaves as the proxy for phyllotaxy, which is actually the opposite. As its written now, its sorrrrt of clear, but could be improved.

Figure 3. I think this would be better represented as a histogram, as -1 to 1 is distribution rather than discrete categories.

L208: Be more explicit about the locality of these nurseries. ‘

L267: Do you have access to the locality data of the twitter poll? Are calathea mostly vegetatively propagated or from seed? If the former, do you know if there is a few large distributers of the horticultural crop, in which most people have purchased from? This would mean that folks are more likely than not to have plants from the same genetic stock. A stretch? Maybe… but possible! If all of this is untrue, and all plants are propagated from see, it would be good to mention this to eliminate this minor doubt.

L326- oh la la- so they are vegetatively propagated. Why would you expect this to reset the phyllotaxy?

L330- provide a citation for this.

Review: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R0/PR3

Conflict of interest statement

Reviewer declares none.

Comments

Comments to Author: In the present study, the authors reported the investigation of the directional phyllotactic bias in calatheas by using a citizen science approach, and found that leaves in calatheas are highly skewed to left-handed, indicating the calatheas are predominately biased towards counter-clockwise phyllotaxy. Overall, this is an interesting study, the scientific approaches and results proceed in a logical manner and are generally convincing. The findings may help to uncover the genetic mechanism underlying the directional phyllotactic bias and handedness. However, there are several issues that need to be addressed as listed below.

1. The sample size in the Twitter poll is a little bit small. I would suggest the authors to expand the poll scope by using additional social media to collect more responses covering diverse countries and regions as much as possible.

2. It seems that 10.5% votes in the Twitter poll is “my plant is right-handed”. I am wondering whether the corresponding participators (or all participators) provided the evidences to prove their votes.

3. This manuscript reported that cultivated calatheas exhibit a strong bias in phyllotactic direction. How about the wild or landrace varieties of calatheas? I would suggest the authors to verify the directional phyllotactic bias in the wild and landrace varieties of calatheas if possible.

Recommendation: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R0/PR4

Comments

Comments to Author: One reviewer raised questions regarding the Twitter poll, including the poll size and evidence supporting participants' selections.

Decision: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R0/PR5

Comments

No accompanying comment.

Author comment: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R1/PR6

Comments

Dear Quantitative Plant Biology,

Thank you for considering and reviewing our manuscript. We found the reviewers' comments most helpful. To address concerns of the Twitter poll size, locality data of responses, the question of phyllotactic bias in wild calatheas, and photographic evidence, we turned to iNaturalist data, which addresses these points. The inclusion of wild calathea data (for which we observe likely the same phyllotactic bias found in cultivated calatheas) strengthens the hypothesis that that the phyllotactic bias we observe is genetically specified.

Thank you again for considering our manuscript.

On behalf of the authors,

Dr. Dan Chitwood

Review: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R1/PR7

Comments

Comments to Author: The authors have addressed my concerns.

Review: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R1/PR8

Comments

Comments to Author: All comments have been correct sufficiently.

Recommendation: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R1/PR9

Comments

No accompanying comment.

Decision: Directional phyllotactic bias in calatheas (Goeppertia, Marantaceae): A citizen science approach — R1/PR10

Comments

No accompanying comment.