Two intervals of the Phanerozoic stand out as times of biosphere-scale revolution in the sense that biogeochemical cycles came under increased control by organisms. These are the early Paleozoic (extending from just before the Cambrian to the Middle Ordovician, a duration of about 100 m.y.), characterized by the appearance of predators, burrowers, and mineralized skeletons, and by the subsequent diversification of planktonic animals and suspension-feeders; and the later Mesozoic (latest Triassic to mid-Cretaceous, a duration of somewhat more than 100 m.y.), marked by a great diversification of predators and burrowers and by the rise of mineralized planktonic protists. This paper explores the economic conditions that make such revolutions possible.

I argue that opportunities for innovation and diversification are enhanced when raw materials and energy are supplied at increasing rates, or when organisms gain greater access to these commodities through rising temperatures and higher metabolic rates. Greater per capita availability of resources enables populations to grow; lessens or alters ecological constraints on functional improvement; makes possible the evolution of high metabolic rates (large incomes), which in turn permit improvement in each of several otherwise incompatible functions; and favors the establishment and spread of daughter species arising through founder speciation. Reductions in productivity reinforce adaptational constraints and may bring about extinctions.

Massive submarine volcanism, together with its associated phenomena of warming, sea-level rise, and widening of warm-weather zones, is proposed to be the chief extrinsic trigger for the Phanerozoic revolutions. The later Mesozoic was characterized by continental rifting, which accompanied massive submarine volcanic eruptions that produced large quantities of nutrients and carbon dioxide. This activity began in the Late Triassic and peaked in the mid- to Late Cretaceous. The Early Cambrian was also a time of rifting and may likewise have been marked by large-scale submarine volcanism. Continental and explosive volcanism, weathering, and upwelling are other potential means for increasing evolutionary opportunity, but their effects are either local or linked directly or indirectly with cooling. Intense chemical weathering in the Early Cambrian, however, may have contributed to the early Paleozoic revolution.

The extrinsic stimulus was greatly amplified through positive feedback by the evolution of higher metabolic rates and other means for acquiring, trading, retaining, and recycling resources more rapidly and from a wider range of environments. Because these novelties usually require a high and predictable supply of resources, their evolution is more likely when extrinsically controlled supplies increase rather than when per capita availability is low.

In the view adopted here, the microevolutionary and microeconomic market forces of competition and natural selection operate against a backdrop of macroeconomic supply and demand. Resources are under both extrinsic and intrinsic control. Positive and negative feedbacks link processes at the micro- and macroeconomic levels. This view complements the genealogical and hierarchical conception of evolution by emphasizing that the pattern of descent is influenced by resources and by market forces operating at all scales of space and time.

Cladograms predict the order in which fossil taxa appeared and, thus, make predictions about general patterns in the stratigraphic record. Inconsistencies between cladistic predictions and the observed stratigraphic record reflect either inadequate sampling of a clade's species, incomplete estimates of stratigraphic ranges, or homoplasy producing an incorrect phylogenetic hypothesis. A method presented in this paper attempts to separate the effects of homoplasy from the effects of inadequate sampling. Sampling densities of individual species are used to calculate confidence intervals on their stratigraphic ranges. The method uses these confidence intervals to test the order of branching predicted by a cladogram. The Lophospiridae (“Archaeogastropoda”) of the Ordovician provide a useful test group because the clade has a good fossil record and it produced species over a long time. Confidence intervals reject several cladistic hypotheses that postulate improbable “ghost lineages.” Other hypotheses are acceptable only with explicit ancestor-descendant relationships. The accepted cladogram is the shortest one that stratigraphic data cannot reject. The results caution against evaluating phylogenetic hypotheses of fossil taxa without considering both stratigraphic data and the possible presence of ancestral species, as both factors can affect interpretations of a clade's evolutionary dynamics and its patterns of morphologic evolution.

Scleractinian corals first appeared during Triassic time in tropical shallow water environments. Controversy surrounds the paleoecology of scleractinian corals of the Late Triassic. Were they like their living counterparts, capable of supporting reefs, or had they not yet coevolved the important association with zooxanthellae that facilitated reef growth and construction? Indirect evidence suggests that some Upper Triassic corals from the Tethys played important constructional roles as reef builders within tropical carbonate complexes of the Tethys. To evaluate this idea, we have employed a geochemical approach based on isotope fractionation to ascertain if Late Triassic corals once possessed zooxanthellae.

We have determined evidence for the ancient presence of algal symbiosis in 13 species of Triassic scleratinians from reef complexes in Turkey and northern Italy. In contrast, two higher latitude Jurassic species used as a control group for isotope analysis, lacked isotopic indications of symbiosis. These findings, together with stratigraphic and paleoecologic criteria, support the contention that Late Triassic scleractinian corals inhabiting shallow-water carbonate complexes of the Tethys were predominantly zooxanthellate, like their living counterparts from present day reefs.

We view the zooxanthellate condition in calcifying reef organisms as a necessary prerequisite for constructional reef development. Our results emphasize the power of stable isotope studies in helping to answer paleobiological questions.

Approximately half of the Caribbean Oligocene reef coral fauna became locally extinct during the Early Miocene; roughly two thirds of the genera driven to local extinction still survive in the Indo-Pacific. Coral genera with lecithotrophic larvae (brooders) preferentially survived, over those with planktotrophic larvae (broadcasters). Among 37 genera for which we inferred reproductive mode, 73% of brooding genera survived the Oligocene/Miocene extinction events, while only 29% of the broadcasting genera survived. The proportion of brooders to broadcasters also increased markedly. During the late Oligocene, 47% of Caribbean reef coral genera were broadcasters, but in the middle Miocene, only 32% of the genera were broadcasters.

Survivorship in Puerto Rican reefs was correlated with tolerance of cold and turbid conditions. Genera tolerant of both cold water and turbidity had much higher survival rates than those tolerant of turbidity alone. Only 25% of the genera that could tolerate neither cold water nor turbidity survived. Most of the eurytopic genera were brooders, while most of the stenotypic genera were broadcasters.

We present two hypotheses that may account for the preferential survivorship of brooders: the recruitment hypothesis, and the dispersal hypothesis. The recruitment hypothesis holds that brooders survive preferentially because lecithotrophic larvae have higher recruitment success than do planktotrophic larvae in marginal habitats, such as upwelling zones. This is supported by the correlation of brooding and eurytopy. The dispersal hypothesis suggests that brooders survive preferentially because lecithotrophic larvae, which typically inherit zooxanthellae from the egg, have a longer larval lifespan and, hence, a wider potential dispersal range, than planktotrophic larvae, which typically capture zooxanthellae from the water column. Biogeographic range data, however, do not support this second hypothesis: modern Indo-Pacific brooding and broadcasting genera have nearly identical ranges, and many brooding species have narrower longitudinal ranges than do broadcasting species. Preferential survivorship of brooding corals contrasts sharply with survivorship patterns among molluscs during extinction events; among molluscs, broadcasters are favored over brooders.

A major increase in upwelling at the Oligocene/Miocene boundary was probably responsible for this extinction/geographic restriction event. Preferential survival of brooding and mixed mode coral genera appears to be a product of their being better able to recruit and survive in marginal conditions such as upwelling zones.

Despite exhaustive investigation of present-day Nautilus, the phylogenetic relationships of the five or six recognized species within this genus remain unclear. Mitochondrial and nuclear DNA sequence data plus a suite of morphological characters are used to investigate phylogenetic relationships. Systematic analysis of the morphological variation fails to characterize described species as independent lineages. However, DNA sequence analysis indicates that there are three geographically distinct clades consisting of western Pacific, eastern Australian/Papua-New Guinean, and western Australian/Indonesian forms. The morphologically and genetically distinct species Nautilus scrobiculatus falls outside the three geographically recognized assemblages. Members of the genus Nautilus also exhibit low levels of sequence divergence. All these data suggest that Nautilus is currently undergoing diversification, which may have begun only several million years ago. These data also suggest that some of the morphological features used to define Nautilus species may simply represent fixed variations in isolated populations within the same species.

We propose that the ancestors of bats were small, nocturnal, sylvatic gliders that used echolocation for general orientation. Their echolocation calls were short, low intensity, broadband clicks, which translated into a very short operational range. In the lineage that gave rise to bats, a switch to stronger, tonal signals permitted the use of echolocation to detect, track, and assess flying insects in subcanopy settings. We propose that these animals hunted from perches and used echolocation to detect, track, and assess flying insects, which they attacked while gliding. In this way, the perfection of echolocation for hunting preceded the appearance of flapping flight, which marked the emergence of bats. Flapping flight had appeared by the Eocene when at least eight families are known from the fossil record. Stronger signals and adaptations to minimize self-deafening were central to the perfection of echolocation for locating flying prey. Echolocation constituted a key innovation that permitted the evolution and radiation of bats. At the same time, however, its short effective range imposed a major constraint on the size of bats. This constraint is associated with flight speed and the very small time intervals from detection of, and contact with a flying target. Gleaning and high duty cycle echolocation are two derived approaches to hunting prey in cluttered situations, places where echoes from background and other objects arrive before or at the same time as echoes from prey. Both had appeared by the Eocene.