Genomic and genetic variation among six Italian chicken native breeds (Livornese, Mericanel della Brianza, Milanino, Bionda Piemontese, Bianca di Saluzzo and Siciliana) were studied using single nucleotide polymorphism (SNP) and copy number variants (CNV) as markers. A total of 94 DNA samples genotyped with Axiom® Genome-Wide Chicken Genotyping Array (Affymetrix) were used in the analyses. The results showed the genetic and genomic variability occurring among the six Italian chicken breeds. The genetic relationship among animals was established with a principal component analysis. The genetic diversity within breeds was calculated using heterozygosity values (expected and observed) and with Wright’s F-statistics. The individual-based CNV calling, based on log R ratio and B-allele frequency values, was done by the Hidden–Markov Model (HMM) of PennCNV software on autosomes. A hierarchical agglomerative clustering was applied in each population according to the absence or presence of definite CNV regions (CNV were grouped by overlapping of at least 1 bp). The CNV map was built on a total of 1003 CNV found in individual samples, after grouping by overlaps, resulting in 564 unique CNV regions (344 gains, 213 losses and 7 complex), for a total of 9.43 Mb of sequence and 1.03% of the chicken assembly autosome. All the approaches using SNP data showed that the Siciliana breed clearly differentiate from other populations, the Livornese breed separates into two distinct groups according to the feather colour (i.e. white and black) and the Bionda Piemontese and Bianca di Saluzzo breeds are closely related. The genetic variability found using SNP is comparable with that found by other authors in the same breeds using microsatellite markers. The CNV markers analysis clearly confirmed the SNP results.

Contrary to intensive pig production, local pig breeds and their production systems are able to respond to the high criteria and expectations of modern society in regard to some environmental aspects, animal welfare, food quality and healthiness. This study proposes the recovery, study and use of a cross between two local breeds, contributing to animal biodiversity conservation and to the income of local pig producers. This work studied the growth performance and blood, carcass and meat quality traits of Alentejano (AL), Bísaro (BI) and Ribatejano (RI) (AL × BI, BI × AL) castrated male pigs. Raised outdoors, pigs were fed commercial diets ad libitum and killed at ~65 kg (trial 1, n = 10 from each genotype) and ~150 kg BW (trial 2, n = 9 from each genotype). In trial 1, AL and AL × BI attained slaughter weight later than BI and BI × AL pigs, with AL presenting lower average daily gains than the other genotypes (P < 0.001). Alentejano and RI pigs presented higher (P < 0.01) levels of plasma total protein than BI. Overall, carcass traits were affected by genotype, with length (P < 0.01), yield (P = 0.07) and lean cut proportions (P < 0.01) lower in AL than BI, and intermediate values for crossed pigs. Conversely, AL pigs presented higher fat cut proportion (P < 0.01), average backfat thickness (P < 0.001) and ‘zwei punkte’ fat depth (P < 0.01) than BI and RI pigs. Alentejano pigs also presented higher Longissimus lumborum (LL) intramuscular fat (P < 0.05), myoglobin content and ultimate pH (P < 0.01), but lower total collagen (P < 0.05), drip (P < 0.001) and cooking losses (P < 0.01), and shear force (P < 0.001) than all other genotypes. Finally, LL showed a more intense red colour in AL than in BI pigs. In trial 2, AL pigs confirmed to be a slow-growing obese breed with lower bone and lean cut proportions than BI, and higher LL intramuscular fat, richer colour, lower water loss and higher tenderness. In both trials, RI pigs grew faster, with higher lean and lower fat cut proportions and backfat thickness, and with overall LL characteristics comparable to those observed in AL pigs. This work demonstrates some clear differences between AL and BI breeds while showing that their crosses present intermediate characteristics in most studied traits. These data on RI pigs can be useful to breeders’ associations and farmers in order to consider the use of these crosses as an option or complement to pure line breeding.

Conflicting hypotheses exist about the contribution of individual pigs to the development of a tail-biting outbreak, but there is limited quantitative information to support or dismiss them. This study aims to quantify the development of tail-biting behaviour at pen and individual piglet level, before and after the first visible tail damage. Video recordings of 14 pens with tail-biting outbreaks and individually marked weaned piglets were used to observe tail-biting incidents (TBIs; piglet biting a penmate’s tail). When visible tail damage was first observed in a pen (i.e. day of tail biting outbreak; D0), the video recordings of the previous 6 (till D−6) and the following 6 days (till D6) were analysed every other day for TBIs and the identities of the biter and bitten piglet were recorded. The average TBIs per individual piglet (within each pen) per observation day were analysed to quantify the development of tail-biting behaviour and to identify pronounced biters and/or bitten piglets. The (absence of) coherence for TBIs in a pen was used to test whether biters preferred a specific penmate. There was an exponential increase in the intensity (linear on log scale) of the TBIs from an average of 0.7 bites/h at D−6 to 2.3 bites/h at D6. An additional negative quadratic component suggests that a plateau for tail-biting behaviour was reached by the end of the observation period. Before any visible tail damage was observed (i.e. before D0), 82% of the piglets performed and 96% of them received tail bites. After D0, the figures were 99% and 100%, respectively. One or a few pronounced biters could be identified in almost all pens. These biters already showed more tail biting at D−6 than their penmates. Furthermore, these biters showed a greater increase in tail-biting behaviour during the observation period than the average scores of their penmates. In contrast, there was no apparent increase in the receipt of bites among the piglets that had already been bitten more than their penmates at D−6. Finally, there was no significant coherence between biters and bitten piglets, indicating that biters showed no preference for biting particular penmates, even when some of them had a damaged tail. These results show that, by using observations of TBIs, possible biters or bitten piglets can already be identified 6 days before tail damage is first apparent in a pen.

In this study, we describe the monitoring of young broiler chicken vocalisation, with sound recorded and assessed at regular intervals throughout the life of the birds from day 1 to day 38, with a focus on the first week of life. We assess whether there are recognisable, and even predictable, vocalisation patterns based on frequency and sound spectrum analysis, which can be observed in birds at different ages and stages of growth within the relatively short life of the birds in commercial broiler production cycles. The experimental trials were carried out in a farm where the broiler where reared indoor, and audio recording procedures carried out over 38 days. The recordings were made using two microphones connected to a digital recorder, and the sonic data was collected in situations without disturbance of the animals beyond that created by the routine activities of the farmer. Digital files of 1 h duration were cut into short files of 10 min duration, and these sound recordings were analysed and labelled using audio analysis software. Analysis of these short sound files showed that the key vocalisation frequency and patterns changed in relation to increasing age and the weight of the broilers. Statistical analysis showed a significant correlation (P<0.001) between the frequency of vocalisation and the age of the birds. Based on the identification of specific frequencies of the sounds emitted, in relation to age and weight, it is proposed that there is potential for audio monitoring and comparison with ‘anticipated’ sound patterns to be used to evaluate the status of farmed broiler chicken.

In an experiment of factorial design, female rabbits were given four diets, containing 13·0, 11·4, 10·4 and 9·7 kJ digestible energy (DE) per g and subjected to two remating intervals (R) of 1 to 2 days (intensive) or 9 days (semi-intensive) from parturition. The experiment lasted for 2 years during which 352 does produced a total of 1254 litters. The only major differences due to diet were that the diet with the highest energy concentration, and which contained 35 g/kg added fat, promoted a significantly higher energy intake in lactation (111 v. an average of 94 MJ DE) than the other diets, and thereby increased litter weight at weaning at 28 days (3·48 v. 2·99 kg). Diet and R showed no major interactive effects. The intensive treatment significantly reduced parturition interval (46 v. 52 days) and increased the output of weaned rabbits per doe per year (35 v. 29). As actual R was more variable than the theoretical R imposed by the treatments, further analyses were made by dividing the does into four groups according to the actual R. In these analyses, the effects of R on current and subsequent lactation performance were assessed separately. The main difference between the groups was that litter size increased significantly with R (e.g. litter size at birth in subsequent parities was 8·0, 9·2, 9·7 and 9·0 for mean intervals of 2, 10, 16 and 37 days). However, the same pattern of differences occurred in the current parity, indicating that it was litter size that affected R, rather than the reverse (i.e. does with small litters conceived earlier than those with larger litters).

One hundred and forty-two kids of the Damascus breed of goat were used over a 10½-mo period to study the effects of early castration (at 7 days of age) on growth, feed conversion efficiency and carcass quality and late castration (at 7½ mo of age) on the presence or absence of taint in goat meat.

Intact male kids grew faster and used feed more efficiently than castrates until they were about 9 mo old (56 kg live weight). There- after intact kids exhibited strong sexual activity and as a result their growth ceased completely whereas castrates continued growing. Early castrates produced fatter carcasses than those of intact kids. Castration of male kids at the age of about 7½ mo (44 kg live weight) was not successful in this trial and the kids performed very poorly. A taint of varying intensity was present in the meat of intact goats but not in that from any of the early or late castrates.

To investigate the effect of red clover formononetin concentration on lamb growth rate and carcass characteristics, 20 lambs (10 ewe lambs and 10 wethers) were grazed on each of three forages : red clover with a high formononetin concentration (HF), red clover with a low formononetin concentration (LF) and a control perennial ryegrass. Animals were finished at condition score 3L, at which point half of all animals were slaughtered immediately, while the other half of the animals were moved to a common ryegrass plot for 3 weeks as a 'withdrawal' period. Mean formononetin concentrations were 0-0, 4-7 and 3-3 g/kg dry matter (DM) for grass, HF and LF swards respectively. The clover swards had higher crude protein concentrations and lower fibre and water-soluble carbohydrate concentrations than the control ryegrass sward. Lambs grazing the HF clover gained 40 g/day live weight more (P < 0-1) than lambs on the other two forages without an increase in forage DM intake as estimated using the nalkane technique. There was no difference in the empty body weight, killing-out proportion, carcass fat class or condition score between animals finished on any of the three forages. Following the 3-week withdrawal period on ryegrass, there were significant residual effects of previous grazed forage on carcass weight, with HF lambs producing heavier carcasses than other lambs. Plasma concentrations of growth hormone and insulin-like growth factor-1 were highest in lambs grazing the HF clover, and suggest a physiological mechanism for the increased growth rates of these animals. There were no differences in the equol contents of the meat of lambs finished on the clover, compared with animals finished on grass, suggesting that there would be no implications for human health following consumption of meat produced from lambs grazing red clover, even with a relatively high concentration of formo'nonetin.

Various dairy cattle production and health characteristics were studied with a view to identify easily available and measurable factors associated with the incidence of ketosis. The analyses were carried out using data from the Langhill Dairy Cattle Research Centre. Two approaches were used to assess the relative risk to cows of getting ketosis: one using information known at the beginning of lactation and one using information collected as the lactation progressed. In both approaches analyses were carried out using different amounts of the available information to simulate differences between recording systems. In the first approach the following were found to relate significantly to the level of recorded ketotic incidents: parity; ketosis in the previous lactation; calving condition score; 305-day milk yield in the previous lactation; and the average milk protein percentage in the previous lactation. The effects of these were quantified. In the second approach, where the change in ketosis incidence rate over the weeks of lactation was investigated, the average dry-matter intake in the previous week and changes in live weight and body condition score over the previous week were found to have a significant effect on the probability of getting ketosis in the coming week. The risk assessments varied depending on the information used and a flexible approach is recommended if potential risk factors are to be successfully incorporated into decision support systems.

The last decade has seen an increase in environmental systems analysis of livestock production, resulting in a significant number of studies with a holistic approach often based on life-cycle assessment (LCA) methodology. The growing public interest in global warming has added to this development; guidelines for carbon footprint (CF) accounting have been developed, including for greenhouse gas (GHG) accounting of animal products.

Here we give an overview of methods for estimating GHG emissions, with emphasis on nitrous oxide, methane and carbon from land use change, presently used in LCA/CF studies of animal products. We discuss where methods and data availability for GHGs and nitrogen (N) compounds most urgently need to be improved in order to produce more accurate environmental assessments of livestock production. We conclude that the top priority is to improve models for N fluxes and emissions from soils and to implement soil carbon change models in LCA/CF studies of animal products. We also point at the need for more farm data and studies measuring emissions from soils, manure and livestock in developing countries.

Corn silage (CS) is associated with a reduction in milk fat content. The fact that CS is constituted of a grain and a forage fraction could explain this effect. This experiment evaluated the effect of grain fraction of CS on rumen fermentation, production performance and milk composition. Earless CS (ECS) was harvested after manually removing corn ears from the plant. Whole CS (WCS) was harvested from the same field on the same day. Eight (four ruminally fistulated) multiparous Holstein cows (84 days in milk) were utilized in a double 4 × 4 Latin square with 21-day periods. Treatments were (dry matter (DM) basis) (1) 23.0% WCS; (2) 12.4% ECS plus 10.6% high moisture corn (HMC) to obtain reconstituted CS (RCS); (3) 23.0% ECS; and (4) 23.0% timothy silage (TS). Diets were formulated to be isonitrogenous and were fed as total mixed ration once a day. DM intake (DMI), milk yield, 4.0% fat-corrected milk (FCM), as well as protein concentration and yield were higher for WCS than ECS. Compared with WCS, cows tended to eat less with RCS, and produced less milk and milk protein. However, yield of FCM was similar between WCS and RCS. Milk fat concentration and yield, as well as the specific ratio of t11 18:1 to t10 18:1 in milk fat did not differ among diets. Milk urea-N tended to be higher for ECS than WCS and TS, whereas ruminal NH3-N was higher with ECS than TS. Rumen pH decreased linearly with time after feeding but was not different between treatments. Higher acetate and lower propionate concentration resulted in greater acetate to propionate ratio with ECS compared with WCS. In conclusion, removing grain fraction from CS decreased milk production and modified rumen fermentation without affecting milk fat concentration and yield. Moreover, despite some differences in DMI and total ruminal volatile fatty acid concentration between WCS and RCS, the restoration of FCM yield, using HMC in RCS diets, to a level of production similar to WCS highlights the importance of energy and nutrients supplied by the grain fraction of CS to support milk yield.

Four ewes fitted with ruminal and duodenal T-piece cannulae were each given six diets in a 6 × 4 factorial design. Diets or experimental treatments consisted of two ratios of forage: concentrate (700:150 (LC) and 400: 600 (HO). Forage was ammonia-treated straw and the concentrate was formulated with barley supplemented with one of three protein sources: sunflower meal, soya-bean meal or fish meal. Duodenal flows ofdigesta were estimated by the dual-phase technique using Co-EDTA and Yb acetate as liquid and solid markers. Microbial nitrogen (N) was estimated from the digesta flow of purine bases and 15N enrichment using as reference samples, bacterial isolates from the liquid (LAB) or solid (SAB) phase of rumen digesta.

Duodenal flow of purine bases (mmol/day) was lower on LC (12·9) than HC (17·7) diets but in both treatments it was depressed by fish meal (12·3) compared with either soya-bean (17·3) or sunflower meal (16·3) as supplements (s.e. 1·13). Urinary excretion of purine derivatives showed a similar trend, 8·6 v. III mmol/day in LC and HC respectively and 8·8 v. 10·4 and 10·5 mmol/day in fish meal, soya-bean and sunflower meal diets (s.e. 0·56), respectively. Variation in excretion of urinary purine derivatives was mainly associated with digestible organic matter intake with an average ratio of 1·7 (s.e. 0·11) mmol per 100 g digestible organic matter intake. Irrespective of the microbial marker used, microbial yield was higher in animals offered HC than in those offered LC and with soya-bean or sunflower meal compared with fish meal supplemented diets. The microbial purine bases/N (mmol/g) ratio varied between LAB (1·99, s.e. 0·092) and SAB (1·69, s.e. 0·071) isolates leading to different estimates of microbial-N yield (g) from duodenal purine bases (7·76 (s.e. 2·84) v. 9·13 (s.e. 3·24)), urinary excretion of allantoin (5·57 (s.e. 2·0) v. 6·57 (s.e. 2·03)) or total purine derivatives (6·43 (s.e. 2·39) v. 7·56 (s.e. 2·77)). Urinary excretion of allantoin or total purine derivatives provided consistently lower estimates of duodenal microbial-N than duodenal purine bases or 15N, although it closely reflected the pattern observed in direct measurements.

During clinical investigation of a commercial herd it was found that intake of supplemented poultry litter (PL) by beef cows at >10 kg/day, was associated with severe cachexia and a mortality rate of between 10 and 20% of cows. Postmortem analysis of 40 fresh carcasses and elevated serum levels of cholesterol, bilirubin, alkaline phosphatase, glutamic oxaloacetic transaminase and sorbitol dehydrogenase in cachetic cows indicated that the cows suffered severe liver damage. The interrelationship between liver damage and PL intake was subsequently investigated in three groups of 20 beef cows each, consuming 0, 3 and 10 kg PL respectively. As determined by the serum indices, intake of 3 kg PL seemed to be sufficient to cause liver damage, although these cows appeared healthy.

In another experiment, six beef cows were stall-fed a diet giving separate access to PL and wheat straw. PL intakes were 3·1,4·7 and 6·0 kg/day. Ruminal ammonia concentration was three to five times higher than the estimate of that required for maximal fermentation in the rumen. The high pH values (6·81 to 6·97) found are optimal for absorption of ammonia from the rumen. The combination of excess absorption of ammonia from the gut and low metabolizable energy intake might have been the cause of liver damage.

A study was conducted to compare apparent digestibility and digesta flow kinetics in the whole digestive tract in two breeds of sheep (Churra and Merino) offered alfalfa hay at about maintenance. Ten mature sheep (five Churra and five Merino) each fitted with a rumen cannula were used in the study. Apparent digestibility was determined by total faecal collection. Liquid (Co-EDTA) and solid (Cr-mordanted fibre) markers were used to estimate rumen volumes and digesta flows. There were no significant differences between Churra and Merino sheep either in dry-matter or fibre apparent digestibility (P > 0·05). Liquid and solid passage rates did not differ between breeds and the estimated total mean retention times were similar for both genotypes. The volume of liquid in the rumen was proportionately 0·14 greater in Churra than in Merino sheep, although the difference was not significant. Estimated saliva secretion was greater in Churra (11·6 (s.e. 0·77) I/day) than in Merino sheep (10·5 (s.e. 0·72) I/day) but the difference did not reach statistical significance. Solid contents of the rumen did not differ between breeds. Rumen particle density was lowest at 2 h after feeding and remained stable at other sampling times, with no significant differences between breeds. There were no significant differences between breeds in the urinary excretion of total purine derivatives but urinary excretion of allantoin and microbial nitrogen supply tended to be higher in Merino than in Churra sheep (P < 0·20). This was attributed to the smaller rumen pool size of Merino (8·0 (s.e. 0·62) kg) compared with Churra sheep (9·2 (s.e. 0·63) kg). The study indicated that there were no apparent breed differences between Churra and Merino sheep in digestibility and digesta passage when they were given a good-quality forage at a low level of intake.

In experiment 1, 12 cows (treatment L) received natural daylight (mean 8 h), 10 h supplementary light (mean intensity 481 lux) and dark (mean 6 h), and 12 cows (treatment N) received natural daylight (mean 8 h) and dark (mean 16 h) for 8 weeks. Supplementary light increased milk yield and tended to increase food intake and loss of live weight. There were no significant effects on milk composition although milk fat concentration tended to be reduced for cows in treatment L. Daily feeding times were not affected by treatment although more feeding took place during the supplementary light in treatment L. Supplementary light increased the time spent lying down per day and reduced the distance walked per day, although cows in treatment L spent less time lying during the light supplementation period. In both treatments, the activity rate was increased on the day of oestrus, but in treatment L the incidence of oestrus-specific behaviour was significantly reduced compared with treatment N.

In experiment 2, 16 cows received natural daylight (mean 9 h) and 10 h supplementary light of mean intensity 0, 101, 191 or 529 lux in a change-over design. There were no significant effects of supplementary light or its intensity on the food intake, milk yield or live-weight change of the cows, but milk fat concentration was reduced for cows receiving supplementary light at 101 or 529 lux and milk protein concentration was reduced for cows receiving light at 529 lux.

Rations for dairy cattle are currently balanced to meet needs for energy, protein, vitamins, and minerals. While individual vitamins and minerals are considered, energy and protein are generally treated in aggregate even though entities within those aggregates can affect milk yield and composition. Significant efforts have been undertaken to describe ruminal metabolism in detail, but descriptions of post-absorptive metabolism assume constant fractional conversions of energy and protein to milk. A quantitative understanding of nutrient metabolism by the post-absorptive tissues is required, and the splanchnic tissues are critical components of the post-absorptive system as they mediate absorption of nutrients and play a rôle in regulation of metabolite availability.

Glucogenic precursor supply can significantly affect endocrine status as well as splanchnic release of glucose, acetate, lactate, ketones, and the non-essential amino acids. Although the relative affinities of the splanchnic tissues for the essential amino acids (AA) are low as compared with the udder, net clearance on a daily basis represents approximately 2/3 of the net supply to the animal due largely to recycling of AA back to the tissue bed. This could be significantly reduced by stimulating removal and use by the udder as splanchnic affinities are much lower than mammary affinities. Additionally, the essential AA composition of absorbed protein is significantly modified by these tissues due to differing affinities for each of the AA. The extent of that modification is not a fixed constant but rather a function of several factors including milk yield. The accuracy of our current feeding systems could be improved if such variable rates of substrate removal replaced current static estimates.

A divergent selection experiment for carcass leanness in Texel-Oxford sheep was established to examine the differences between genetically lean and fat animals derived from the same base population. The selection criterion was designed to change body composition without a corresponding change in live weight, using an index of ultrasonic backfat depth and live weight at 20 weeks of age. The index was constructed using estimates of genetic and phenotypic parameters, which were available at the start of the experiment in 1985. The difference between the high and low lines, after 3 years of selection, for the selection index, live weight at 20 weeks of age, ultrasonic backfat and muscle depths was 0·59,1·30 kg, -0·76 mm and 0·88 mm respectively. The estimated difference for carcass lean and fat weight was 0·72 kg and -0·04 kg respectively with 13·5 g/kg and -13·8 g/kg for carcass lean and fat proportion. The realized heritability for the selection index, estimated from the regression of cumulative response on cumulative selection differential was 0·42, with a standard error of 0·25, after taking account of genetic drift. The selection index heritability, estimated with residual maximum likelihood (REML) methodology, was 0·46 (s.e. 0·14). REML heritability estimates for live weight at 20 weeks of age, ultrasonic backfat and muscle depths were 0·20 (s.e. 0·13), 0·35 (s.e. 0·14) and 0·43 (s.e. 0·14) respectively.

Using behavioural indicators of thermal discomfort, that is, shade seeking, panting scores (PS) and respiration rate (RR), we evaluated the effect of hot summer conditions and shade, for a herd of adult Holstein dairy cows and a herd of Belgian Blue beef cows kept on pasture in a temperate area (Belgium). During the summer of 2012, both herds were kept on pasture without access to shade (NS). During the summers of 2011 and 2013 each herd was divided into one group with (S) and one without (NS) access to shade. Shade was provided by young trees with shade cloth (80% reduction in solar radiation) hung between them. For S cows, we investigated how shade use was related to hot conditions as quantified by six climatic indices. The heat load index (HLI), which incorporates air temperature and humidity, solar radiation and wind speed, was the best predictor of the six indices tested. In 2011, there was a relatively high threshold for use of shade. When HLI=90, shade use probability reached 17% for dairy cows and 27% for beef cows. In 2013, however, at HLI=90, shade use probability reached 48% for dairy cows and 41% for beef cows. For animals from the NS treatment we determined the effect of hot summer conditions on RR and PS (with 0=no panting and 4.5=extreme panting). In both types of cattle, an increase in black globe temperature was the best predictor for increasing RR and PS. Furthermore, we determined how the effect of hot summer conditions on RR and PS was affected by the use of shade. Under hot conditions (black globe temperature ⩾30°C), >50% of the animals under shade retained normal PS and RR (PS<1 and RR<90 breaths per minute), whereas normal RR and PS were significantly less prevalent for animals outside shade. Our findings suggest that, even in temperate summers, heat can induce thermal discomfort in cattle, as evidenced by increases in shade use, RR and PS, and that shade increases thermal comfort.

The correlation between rumen chemical and bacterial changes was investigated during a four periodical stepwise adaptation to a high-concentrate diet (concentrate level at 0%, 30%, 50% and 70% for diet I to IV, respectively) in goats. The results showed that ruminal pH decreased from 6.7 to 5.5 after switching from diet I to II, and was maintained at about 5.5 on diet III. Denaturing gradient gel electrophoresis results showed that the rumen bacterial community was relatively stable during the initial three feeding periods, except for the appearance of three bands when diet changed from I to II, suggesting that an appropriate concentrate level can promote the proliferation of some bacteria. After 12 days of feeding diet III, total volatile fatty acid (VFA) concentration and butyrate proportion decreased. At days 2 and 3 of feeding diet IV, ruminal pH declined sharply to 5.3 and 4.7, respectively, and total VFA concentration decreased further while lactic acid concentration increased markedly, suggesting a relation between lactic acid accumulation and ruminal pH decline. At the same time, many bacteria disappeared, including most fibrolytic-related bacteria while Streptococcus bovis and Prevotella-like species dominated. Interestingly, Succinivibrio dextrinosolvens-like species maintained throughout the experiment, suggesting its tolerance to low pH. In conclusion, rumen bacterial community was relatively stable feeding 0% to 50% concentrate diets, and it was observed that appropriate concentrate levels in the diet could increase the diversity of rumen bacteria. However, concentrate-rich diets caused lactic acid accumulation and low ruminal pH that caused the disappearance of most fibrolytic-related bacteria sensitive to low pH while S. bovis and genus Prevotella persisted.

The increased demand for animal-derived protein and energy for human consumption will have to be achieved through a combination of improved animal genetic merit and better management strategies. The objective of the present study was to quantify whether differences in genetic merit among animals materialised into phenotypic differences in commercial herds. Carcass phenotypes on 156 864 animals from 7301 finishing herds were used, which included carcass weight (kg), carcass conformation score (scale 1 to 15), carcass fat score (scale 1 to 15) at slaughter as well as carcass price. The price per kilogram and the total carcass value that the producer received for the animal at slaughter was also used. A terminal index, calculated in the national genetic evaluations, was obtained for each animal. The index was based on pedigree index for calving performance, feed intake and carcass traits from the national genetic evaluations. Animals were categorised into four terminal index groups on the basis of genetic merit estimates that were derived before the expression of the phenotypic information by the validation animals. The association between terminal index and phenotypic performance at slaughter was undertaken using mixed models; whether the association differed by gender (i.e. young bulls, steers and heifers) or by early life experiences (animals born in a dairy herd or beef herd) was also investigated. The regression coefficient of phenotypic carcass weight, carcass conformation and carcass fat on their respective estimated breeding values (EBVs) was 0.92 kg, 1.08 units and 0.79 units, respectively, which is close to the expectation of one. Relative to animals in the lowest genetic merit group, animals in the highest genetic merit group had, on average, a 38.7 kg heavier carcass, with 2.21 units greater carcass conformation, and 0.82 units less fat. The superior genetic merit animals were, on average, slaughtered 6 days younger than their inferior genetic merit contemporaries. The superior carcass characteristics of the genetically elite animals materialised in carcasses worth €187 more than those of the lowest genetic merit animals. Although the phenotypic difference in carcass traits of animals divergent in terminal index differed statistically by animal gender and early life experience, the detected interactions were generally biologically small. This study clearly indicates that selection on an appropriate terminal index will produce higher performing animals and this was consistent across all production systems investigated.

One of the main aims of pasture-based systems of dairy production is to increase the proportion of grazed grass in the diet. This is most easily achieved by increasing the number of grazing days. However, periods of inclement weather conditions can reduce the number of days at pasture. The two objectives of this experiment were: (i) to investigate the effect of restricting pasture access time on animal production, grazing behaviour and dry matter intake (DMI) of spring calving dairy cows in early lactation; and (ii) to establish whether silage supplementation is required when cows return indoors after short grazing periods. In all, 52 Holstein–Friesian spring calving dairy cows were assigned to a four-treatment study from 25 February to 26 March 2008. The four treatments were: full-time access to pasture (22H; control); 4.5-h- pasture access after both milkings (2 × 4.5H); 3-h pasture access after both milkings (2 × 3H); 3-h pasture access after both milkings with silage supplementation by night (2 × 3SH). All treatments were offered 14.4 kg DM/cow per day herbage from swards, with a mean pre-grazing yield of 1739 kg DM/ha above 4 cm, – and were supplemented with 3 kg DM/cow per day of concentrate. The 2 × 3SH treatment was offered an additional 4 kg DM/cow of grass silage by night. Restricting pasture access time (2 × 3H, 2 × 3SH and 2 × 4.5H) had no effect on milk (28.3 kg/cow per day) and solids-corrected milk (27.2 kg/cow per day) yield when compared with the treatment grazing full time. Supplementing animals with grass silage did not increase milk production when compared with all other treatments. Milk protein concentration tended to be lower (P = 0.08; 32.2 g/kg) for the 2 × 3SH animals when compared with the 22H animals (33.7 g/kg). The grass DMI of the 2 × 3SH treatment was significantly lower (−2.3 kg DM/cow per day) than all other treatments (11.9 kg DM/cow per day), yet the total DMI of these animals was highest (16.6 kg DM/cow per day). The 22H cows grazed for 481 min/cow per day, which is significantly longer than all other treatments. The 2 × 3H animals grazed for 98% of the time, whereas the 2 × 3SH grazed for 79% of their time at pasture. Restricting pasture access time did not affect end body weight or body condition score. The results of this study indicate that restricting pasture access time of dairy cows in early lactation does not affect milk production performance. Furthermore, supplementing cows with grass silage does not increase milk production but reduces grazing efficiency.