from VI - MicroRNAs in stem cell development
Published online by Cambridge University Press: 22 August 2009
Introduction
Small, non-coding RNAs of 18–32 nucleotides have emerged as evolutionarily conserved potent regulators of gene expression in the past decade. Studies of the function of small RNAs demonstrated their pivotal roles in various aspects of cell and developmental biology, as detailed in the previous chapters of this book. As the newest citizens of the small RNA world, Piwi-interacting RNAs (piRNAs) of mostly 26–32 nucleotides in length were discovered in 2006 in mammalian testes (Aravin et al., 2006; Girard et al., 2006; Grivna et al., 2006a; Lau et al., 2006; Watanabe et al., 2006). They are so named because they interact with the Piwi sub-family proteins of the evolutionary conserved Argonaute/Piwi protein family. piRNAs also exist in large numbers in fly (Brennecke et al., 2007; Gunawardane et al., 2007) and fish gonads (Houwing et al., 2007), implying the evolutionary conservation of their function. They differ from miRNAs and siRNAs in size, biogenesis, expression pattern, and possibly function. Although still remaining to be fully elucidated, clues about their biogenesis and function have started emerging. There are over 60 000 different species of piRNA identified so far, much exceeding the several hundreds of miRNAs that have been discovered. This fascinating complexity of piRNAs provides unprecedented opportunities for unraveling novel and diverse mechanisms of small RNA-mediated gene regulation. This chapter will summarize the latest progress on piRNAs.
Ago/Piwi protein family comprises two sub-families
Any description of small RNAs would be incomplete without an account of their protein partners: the Argonaute/Piwi (Ago/Piwi) family proteins.
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