Book contents
- Frontmatter
- Contents
- Preface
- Acknowledgments
- 1 The Central Dogma
- 2 RNA Secondary Structure
- 3 Comparing DNA Sequences
- 4 Predicting Species: Statistical Models
- 5 Substitution Matrices for Amino Acids
- 6 Sequence Databases
- 7 Local Alignment and the BLAST Heuristic
- 8 Statistics of BLAST Database Searches
- 9 Multiple Sequence Alignment I
- 10 Multiple Sequence Alignment II
- 11 Phylogeny Reconstruction
- 12 Protein Motifs and PROSITE
- 13 Fragment Assembly
- 14 Coding Sequence Prediction with Dicodons
- 15 Satellite Identification
- 16 Restriction Mapping
- 17 Rearranging Genomes: Gates and Hurdles
- A Drawing RNA Cloverleaves
- B Space-Saving Strategies for Alignment
- C A Data Structure for Disjoint Sets
- D Suggestions for Further Reading
- Bibliography
- Index
Bibliography
Published online by Cambridge University Press: 05 June 2012
Book contents
- Frontmatter
- Contents
- Preface
- Acknowledgments
- 1 The Central Dogma
- 2 RNA Secondary Structure
- 3 Comparing DNA Sequences
- 4 Predicting Species: Statistical Models
- 5 Substitution Matrices for Amino Acids
- 6 Sequence Databases
- 7 Local Alignment and the BLAST Heuristic
- 8 Statistics of BLAST Database Searches
- 9 Multiple Sequence Alignment I
- 10 Multiple Sequence Alignment II
- 11 Phylogeny Reconstruction
- 12 Protein Motifs and PROSITE
- 13 Fragment Assembly
- 14 Coding Sequence Prediction with Dicodons
- 15 Satellite Identification
- 16 Restriction Mapping
- 17 Rearranging Genomes: Gates and Hurdles
- A Drawing RNA Cloverleaves
- B Space-Saving Strategies for Alignment
- C A Data Structure for Disjoint Sets
- D Suggestions for Further Reading
- Bibliography
- Index
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- Genomic PerlFrom Bioinformatics Basics to Working Code, pp. 319 - 324Publisher: Cambridge University PressPrint publication year: 2002