Skip to main content Accessibility help
×
Hostname: page-component-78c5997874-g7gxr Total loading time: 0 Render date: 2024-11-05T00:42:59.914Z Has data issue: false hasContentIssue false

6 - Patterns and determinants of soil biological diversity

Published online by Cambridge University Press:  17 September 2009

Richard D. Bardgett
Affiliation:
Lancaster University
Gregor W. Yeates
Affiliation:
Landcare Research
Jonathan M. Anderson
Affiliation:
University of Exeter
Richard Bardgett
Affiliation:
Lancaster University
Michael Usher
Affiliation:
University of Stirling
David Hopkins
Affiliation:
University of Stirling
Get access

Summary

SUMMARY

  1. This chapter examines the vast diversity of organisms that live in the soil and discusses the various factors that regulate its spatial and temporal patterning.

  2. There is a dearth of information available on the diversity of soil biota, especially at the species level, but existing data provide little support for the idea that the same forces that regulate patterns of diversity above-ground (i.e. productivity and disturbance) control patterns of biodiversity below-ground, or that regional-scale patterns of soil biodiversity show similar trends to those that occur above-ground.

  3. We argue that patterning of soil biodiversity is related primarily to the heterogeneous nature, or patchiness, of the soil environment at different spatial and temporal scales, and that this heterogeneity provides unrivalled potential for niche partitioning, or resource and habitat specialisation, leading to avoidance of competition and hence co-existence of species.

  4. We highlight the challenge for soil ecologists to identify the hierarchy of controls on soil biological diversity that operate at different spatial and temporal scales, and to determine the role of spatio-temporal patterning of soil biodiversity as a driver of above-ground community assembly and productivity.

Introduction

The Earth hosts a bewildering diversity of organisms that are distributed in a wide variety of spatial and temporal patterns across, and within, the Earth's ecosystems. Making sense of these complex patterns of diversity, and understanding the dominant forces that control them, has been a major theme of community ecology (Huston 1994).

Type
Chapter
Information
Publisher: Cambridge University Press
Print publication year: 2005

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

, Al-Mufti M. M., Sydes, C. L., Furness, S. B., Grime, J. P. & Bond, S. R. (1977). A quantitative analysis of shoot phenology and dominance in herbaceous vegetation. Journal of Ecology, 65, 759–791Google Scholar
Anderson, J. M. (1975). The enigma of soil animal species diversity. Progress in Soil Zoology (Ed. by , J. Vanek), pp. 51–58. Prague: AcademiaGoogle Scholar
Anderson, J. M. (1978). Inter- and intra-habitat relationships between woodland Cryptostigmata species diversity and the diversity of soil and litter microhabitats. Oecologia, 32, 341–348CrossRefGoogle ScholarPubMed
André, H. M., Ducarme, X. & Lebrun, P. (2002). Soil biodiversity: myth, reality or conning?Oikos, 96, 3–24CrossRefGoogle Scholar
André, H. M., Noti, M. I. & Lebrun, P. (1994). The soil fauna: the other last biotic frontier. Biodiversity and Conservation, 3, 45–56CrossRefGoogle Scholar
Bale, J. S., Hodkinson I. D., Block, W., et al. (1997). Life strategies of arctic terrestrial arthropods. Ecology of Arctic Environments (Ed. by , S. J. Woodin & , M. Marquiss), pp. 137–165. Oxford: Blackwell ScientificGoogle Scholar
Bardgett, R. D. (2000). Patterns of below-ground primary succession at Glacier Bay, south-east Alaska. Bulletin of the British Ecological Society, 31, 40–42Google Scholar
Bardgett, R. D., Hobbs, P. J. & Frostegård, Å. (1996). Changes in fungal: bacterial biomass ratios following reductions in the intensity of management on an upland grassland. Biology and Fertility of Soils, 22, 261–264CrossRefGoogle Scholar
Bardgett, R. D., Jones, A. C., , Jones D. L., et al. (2001). Soil microbial community patterns related to the history and intensity of grazing in sub-montane ecosystems. Soil Biology and Biochemistry, 33, 1653–1664CrossRefGoogle Scholar
Bardgett, R. D. & McAlister, E. (1999). The measurement of soil fungal: bacterial biomass ratios as an indicator of ecosystem self-regulation in temperate grasslands. Biology and Fertility of Soils, 19, 282–290CrossRefGoogle Scholar
Bardgett, R. D. & Wardle, D. A. (2003). Herbivore mediated linkages between above-ground and below-ground communities. Ecology, 84, 2258–2268CrossRefGoogle Scholar
Barker, G. M. & Mayhill, P. C. (1999). Patterns of diversity and habitat relationships in terrestrial mollusc communities of the Pukemaru Ecological District, northeastern New Zealand. Journal of Biogeography, 26, 215–238CrossRefGoogle Scholar
Behan-Pelletier, V. M. (1978). Diversity, distribution and feeding habits of North American Arctic soil Acari. Unpublished Ph.D. thesis, McGill University
Bloemers, G. F., Hodda, M., Lambshead, P. J. D., Lawton, J. H. & Wanless, F. R. (1997). The effects of forest disturbance on diversity of tropical soil nematodes. Oecologia, 111, 575–582CrossRefGoogle ScholarPubMed
Boag, B. & Yeates, G. W. (1998). Soil nematode biodiversity in terrestrial ecosystems. Biodiversity and Conservation, 7, 617–630CrossRefGoogle Scholar
Bongers, T. & Bongers, M. (1998). Functional diversity of nematodes. Applied Soil Ecology, 10, 239–251CrossRefGoogle Scholar
Brand, R. H. & Dunn, C. P. (1998). Diversity and abundance of springtails (Insecta: Collembola) in native and restored tallgrass prairies. American Midland Naturalist, 139, 235–242CrossRefGoogle Scholar
Chalupský, J. (1995). Long-term study of Enchytraeidae (Oligochaeta) in man-impacted mountain forest soils in the Czech Republic. Acta Zoologica Fennica, 196, 318–320Google Scholar
Chan, K. Y. (2001). An overview of some tillage impacts on earthworm population abundance and diversity: implications for functioning in soils. Soil and Tillage Research, 57, 179–191CrossRefGoogle Scholar
Cho, J. C. & Tiedje, J. M. (2000). Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil. Applied and Environmental Microbiology, 66, 5448–5456CrossRefGoogle ScholarPubMed
Cole, L., Buckland, S. M. & Bardgett, R. D. (2005). Relating soil microarthropod community structure and diversity to soil fertility manipulations in temperate grassland. Soil Biology and Biochemistry, in pressCrossRefGoogle Scholar
Connell, J. H. (1978). Diversity in tropical rainforests and coral reefs. Science, 199, 1302–1310CrossRefGoogle Scholar
Cooke, R. C. & , Rayner A. D. M. (1984). Ecology of Saprotrophic Fungi. London: LongmanGoogle Scholar
Ruiter, P. C., Neutel, A. N. & Moore, J. C. (1994). Modelling food webs and nutrient cycling in agro-ecosystems. Trends in Ecology and Evolution, 9, 378–383CrossRefGoogle ScholarPubMed
Ruiter, P. C., Neutel, A. N. & Moore, J. C. (1995). Energetics, patterns of interaction strengths, and stability in real ecosystems. Science, 269, 1257–1260CrossRefGoogle ScholarPubMed
Didden, W. A. M. (1993). Ecology of terrestrial Enchytraeidae. Pedobiologia, 37, 2–29Google Scholar
Didden, W. A. M. & Fluiter, R. (1998). Dynamics and stratification of Enchytraeidae in the organic layer of a Scots pine forest. Biology and Fertility of Soils, 26, 305–312CrossRefGoogle Scholar
Eggleton, P. & Bignell, D. E. (1995). Monitoring the response of tropical insects to changes in the environment: troubles with termites. Insects in a Changing Environment (Ed. by , R. Harrington & , N. E. Stork), pp. 434–497. London: Academic PressGoogle Scholar
Eggleton, P., Bignell, D. E., Hauser, S., et al. (2002). Termite diversity across an anthropogenic disturbance gradient in the humid forest zone of West Africa. Agriculture, Ecosystems and Environment, 90, 189–202CrossRefGoogle Scholar
Ettema, C. H. & Wardle, D. A. (2002). Spatial soil ecology. Trends in Ecology and Evolution, 17, 177–183CrossRefGoogle Scholar
Finlay, B. J. (2002). Global dispersal of free-living microbial eukaryote species. Science, 296, 1061–1063CrossRefGoogle ScholarPubMed
Finlay, B. J., Esteban, G. F., Olmo, J. L. & Tyler, P. A. (1999). Global distribution of free-living microbial species. Ecography, 22, 138–144CrossRefGoogle Scholar
Foissner, W. (1997a). Global soil ciliate (Protozoa, Ciliophora) diversity: a probability-based approach using large sample collections from Africa, Australia and Antarctica. Biodiversity and Conservation, 6, 1627–1638CrossRefGoogle Scholar
Foissner, W. (1997b). Soil ciliates (Protozoa: Ciliophora) from evergreen rain forests of Australia, South America and Costa Rica: diversity and description of new species. Biology and Fertility of Soils, 25, 317–339CrossRefGoogle Scholar
Foissner, W. (1999a). Notes on the soil ciliate biota (Protozoa, Ciliophora) from the Shimba Hills in Kenya (Africa): diversity and descriptions of three new genera and ten new species. Biodiversity and Conservation, 8, 319–389CrossRefGoogle Scholar
Foissner, W. (1999b). Protist diversity: estimates of the near-imponderable. Protist, 150, 363–368CrossRefGoogle Scholar
Fragoso, C., Brown, G. G., Patrón, J. C., et al. (1997). Agricultural intensification, soil biodiversity and agroecosystem function in the tropics: the role of earthworms. Applied Soil Ecology, 6, 17–35CrossRefGoogle Scholar
Frankland, J. C. (1998). Fungal succession: unravelling the unpredictable. Mycological Research, 102, 1–15CrossRefGoogle Scholar
Gaston, K. J. (2000). Global patterns in biodiversity. Nature, 405, 220–227CrossRefGoogle ScholarPubMed
Grace, J. B. (1999). The factors controlling species density in herbaceous plant communities: an assessment. Perspectives in Plant Ecology, Evolution and Plant Systematics, 2, 1–28CrossRefGoogle Scholar
Grime, J. P. (1973). Control of species diversity in herbaceous vegetation. Journal of Environmental Management, 1, 151–167Google Scholar
Gill, R. W. (1969). Soil microarthropod abundance following old field litter manipulation. Ecology, 50, 805–816CrossRefGoogle Scholar
Hansen, R. A. (2000). Effects of habitat complexity and composition on a diverse litter microarthropod assemblage. Ecology, 81, 1120–1132CrossRefGoogle Scholar
Hansen, R. A. & Coleman, D. C. (1998). Litter complexity and composition are determinants of the diversity and species composition of oribatid mites (Acari: Oribatida) in litterbags. Applied Soil Ecology, 9, 17–23CrossRefGoogle Scholar
Heywood, V. H. (1995). Global Biodiversity Assessment. Cambridge: Cambridge University PressGoogle Scholar
Hodkinson, I. D., Coulson, S. J., Harrison, J. & Webb, N. R. (2001). What a wonderful web they weave: spiders, nutrient capture and early ecosystem development in the high Arctic. Some counter-intuitive ideas on community assembly. Oikos, 95, 349–352CrossRefGoogle Scholar
Hooper, D. U., Bignell, D. E., Brown, V. K., et al. (2000). Interactions between above-ground and below-ground biodiversity in terrestrial ecosystems: patterns, mechanisms, and feedbacks. BioScience, 50, 1049–1061CrossRefGoogle Scholar
Huston, M. A. (1979). A general model of species diversity. American Naturalist, 113, 81–101CrossRefGoogle Scholar
Huston, M. A. (1994). Biological Diversity. Cambridge: Cambridge University PressGoogle Scholar
Hutcheson, J. A., Iles, D. R. & , Kendall D. A. (2001). Earthworm populations in conventional and integrated farming systems in the LIFE Project (SW England) in 1990–2000. Annals of Applied Biology, 139, 361–372CrossRefGoogle Scholar
Insam, H. & Haselwandter, K. (1989). Metabolic quotient of the soil microflora in relation to plant succession. Oecologia, 79, 174–178CrossRefGoogle ScholarPubMed
Jiménez, J. J., Moreno, A. G., Decaëns, T., et al. (1998). Earthworm communities in native savannas and man-made pastures of the Eastern Plains of Colombia. Biology and Fertility of Soils, 28, 101–110Google Scholar
Joose, E. N. G. & Verhoef, H. A. (1987). Developments in ecophysiology research on soil invertebrates. Advances in Ecological Research, 16, 175–248CrossRefGoogle Scholar
Kaufmann, R. (2001). Invertebrate succession on an alpine glacier foreland. Ecology, 82, 2261–2278CrossRefGoogle Scholar
Lavelle, P., Lattaud, C., Trigo, D. & Barois, I. (1995). Mutualism and biodiversity in soils. Plant and Soil, 170, 23–33CrossRefGoogle Scholar
Lavelle, P. & Pashanasi, B. (1989). Soil macrofauna and land management in Peruvian Amazonia (Yurimaguas, Loreto). Pedobiologia, 33, 283–291Google Scholar
Lawton, J. H. (2000). Community Ecology in a Changing World. Oldendorf/Luhe: Ecology InstituteGoogle Scholar
Lawton, J. H., Bignell, D. E., Bloemers, G. F., Eggleton, P. & Hodda, M. E. (1996). Carbon flux and diversity of nematodes and termites in Cameroon forest soils. Biodiversity and Conservation, 5, 261–273CrossRefGoogle Scholar
Lee, K. E. (1985). Earthworms: Their Ecology and Relationships with Soils and Land Use. Sydney: Academic PressGoogle Scholar
Lundkvist, H. (1983). Effects of clear-cutting on the enchytraeids in a Scots pine forest soil in central Sweden. Journal of Applied Ecology, 20, 873–885CrossRefGoogle Scholar
McLean, M. A. & Huhta, V. (2002). Microfungal community structure in anthropogenic birch stands in central Finland. Biology and Fertility of Soils, 35, 1–12Google Scholar
Mittelbach, G. G., Steiner, C. F., Scheiner, S. M., et al. (2001). What is the observed relationship between species richness and productivity?Ecology, 82, 2381–2396CrossRefGoogle Scholar
Moore, J. C. & de Ruiter, P. C. (2000). Invertebrates in detrital food webs along gradients of productivity. Invertebrates as Webmasters in Ecosystems (Ed. by , D. C. Coleman & , P. F. Hendrix), pp. 161–184. Oxford: CAB International
Ohtonen, R., Fritze, H., Pennanen, T., Jumpponen, A. & Trappe, J. (1999). Ecosystem properties and microbial community changes in primary succession on a glacier forefront. Oecologia, 119, 239–246CrossRefGoogle ScholarPubMed
Roberts, M. S. & Cohen, F. M. (1995). Recombination and migration rates in natural populations of Bacillus subtilus and Bacillus mojavensis. Evolution, 49, 1081–1094CrossRefGoogle Scholar
Saetre, P. & Bääth, E. (2000). Spatial variation and patterns of soil microbial community structure in a mixed spruce-birch stand. Soil Biology and Biochemistry, 30, 909–917CrossRefGoogle Scholar
Scheu, S. & Falca, M. (2000). The soil food web of two beech forests (Fagus sylvatica) of contrasting humus type: stable isotope analysis of macro- and mesofauna dominated community. Oecologia, 123, 285–296CrossRefGoogle ScholarPubMed
Scheu, S. & Schulz, E. (1996). Secondary succession, soil formation and development of a diverse community of oribatids and saprophagous soil macro-invertebrates. Biological Conservation, 5, 235–250Google Scholar
Schipper, L. A., Degens, B. P., Sparling, G. P. & Duncan, L. C. (2001). Changes in microbial heterotrophic diversity along five plant successional sequences. Soil Biology and Biochemistry, 33, 2093–2104CrossRefGoogle Scholar
Sheil, D. & Burslem, D. F. R. P. (2003). Disturbing hypothesis in tropical forests. Trends in Ecology and Evolution, 18, 18–26CrossRefGoogle Scholar
Siepel, H. (1996). Biodiversity of soil microarthropods: the filtering of species. Biodiversity and Conservation, 5, 251–260CrossRefGoogle Scholar
Siepel, H. & Bund, C. F. (1988). The influence of management practices on the microarthropod community of grassland. Pedobiologia, 31, 339–354Google Scholar
Smith, H. G. (1996). Diversity of Antarctic terrestrial protozoa. Biodiversity and Conservation, 5, 1379–1394CrossRefGoogle Scholar
Smith, R. S, Shiel, R. S., Bardgett, R. D., et al. (2003). Diversification management of meadow grassland: plant species diversity and functional traits associated with change in meadow vegetation and soil microbial communities. Journal of Applied Ecology, 40, 51–64CrossRefGoogle Scholar
Springett, J. A. (1992). Distribution of lumbricid earthworms in New Zealand. Soil Biology and Biochemistry, 24, 1377–1381CrossRefGoogle Scholar
Stanton, N. L. (1979). Patterns of species diversity in temperate and tropical litter mites. Ecology, 62, 295–304CrossRefGoogle Scholar
Ştefan, V. (1977). Soil Enchytraeidae from the Cerna Valley. Fourth Symposium on Soil Biology, pp. 277–283, Rumanian National Society of Soil Science. Bucureşti: Editura CeresGoogle Scholar
Putten, W. H., Vet, L. E. M., Harvey, J. A. & Wäckers, F. L. (2001). Linking above- and below-ground multitrophic interactions of plants, herbivores, pathogens and their antagonists. Trends in Ecology and Evolution, 16, 547–554CrossRefGoogle Scholar
Verhoef, H. A. & Selm, A. J. (1983). Distribution and population dynamics of Collembola in relation to soil moisture. Holarctic Ecology, 6, 387–394Google Scholar
Wall, J. W., Skene, K. R. & Neilsen, R. (2002). Nematode community and trophic structure along a sand dune succession. Biology and Fertility of Soils, 35, 293–301CrossRefGoogle Scholar
Wall, D. H. & Virginia, R. A. (1999). Controls on soil biodiversity: insights from extreme environments. Applied Soil Ecology, 13, 137–150CrossRefGoogle Scholar
Wardle, D. A. (1995). Impacts of disturbance on detritus food webs in agro-ecosystems of contrasting tillage and weed management practices. Advances in Ecological Research, 26, 105–185CrossRefGoogle Scholar
Wardle, D. A. (2002). Communities and Ecosystems: Linking the Above-ground and Below-ground Components. Princeton, NJ: Princeton University PressGoogle Scholar
Wardle, D. A., Nicholson, K. S., Bonner, K. I. & Yeates, G. W. (1999). Effects of agricultural intensification on soil-associated arthropod population dynamics, community structure, diversity and temporal variability over a seven-year period. Soil Biology and Biochemistry, 31, 1691–1706CrossRefGoogle Scholar
Weis-Fogh, T. (1948). Ecological investigations of mites and collemboles in the soil. Description of some new mites (Acari). Natura Jutlandica, 1, 139–277Google Scholar
Wilson, E. O. (2002). The Future of Life. New York: Alfred A. KnopfGoogle Scholar
Yeates, G. W. (1968). An analysis of annual variation of the nematode fauna in dune sand, at Himatangi Beach, New Zealand. Pedobiologia, 8, 173–207Google Scholar
Yeates, G. W. (1980). Populations of nematode genera in soils under pasture. III. Vertical distribution at eleven sites. New Zealand Journal of Agricultural Research, 23, 117–128CrossRefGoogle Scholar
Yeates, G. W., Hawke, M. F. & Rijske, W. C. (2000). Changes in soil fauna and soil conditions under Pinus radiata agroforestry regimes during a 25-year tree rotation. Biology and Fertility of Soils, 30, 391–406CrossRefGoogle Scholar
Yeates, G. W. & King, K. L. (1997). Soil nematodes as indicators of the effect of management on grasslands in the New England Tablelands (NSW): comparison of native and improved grasslands. Pedobiologia, 41, 526–536Google Scholar
Yeates, G. W., Shepherd, T. G. & Francis, G. S. (1998). Contrasting response to cropping of populations of earthworms and predacious nematodes in four soils. Soil and Tillage Research, 48, 255–264CrossRefGoogle Scholar
Zeller, V., Bardgett, R. D. & Tappeiner, U. (2001). Site and management effects on soil microbial properties of subalpine meadows: a study of land abandonment along a north–south gradient in the European Alps. Soil Biology and Biochemistry, 33, 639–650CrossRefGoogle Scholar

Save book to Kindle

To save this book to your Kindle, first ensure [email protected] is added to your Approved Personal Document E-mail List under your Personal Document Settings on the Manage Your Content and Devices page of your Amazon account. Then enter the ‘name’ part of your Kindle email address below. Find out more about saving to your Kindle.

Note you can select to save to either the @free.kindle.com or @kindle.com variations. ‘@free.kindle.com’ emails are free but can only be saved to your device when it is connected to wi-fi. ‘@kindle.com’ emails can be delivered even when you are not connected to wi-fi, but note that service fees apply.

Find out more about the Kindle Personal Document Service.

Available formats
×

Save book to Dropbox

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Dropbox.

Available formats
×

Save book to Google Drive

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Google Drive.

Available formats
×