The Brazilian Amazon rain forest has lost c. 17% of its originally forested portion, due to deforestation and selective logging. Forest degradation caused by logging contributes to loss of animal species that require specialized habitats to survive, such as woodcreepers that inhabit understorey areas. Habitat associations of woodcreeper species can be important for identifying species that have restricted distribution and/or habitat specialization. Our study investigates the effects of spatial variation in forest structure and some landscape features (canopy openness, altitude, distance to stream and exploited basal area) on the abundance and composition of woodcreeper assemblage in selectively logged tropical forests in Southern Amazonia. We used mist-nets and points count to quantify the composition and abundance of woodcreepers in 32 plots in three sites. Plots were spatially arranged in PPBio LTER sites (long-term ecological research plots, systematically spaced at 1-km intervals) in Southern Amazonia. A total of 240 individuals (captured, observed and/or heard) belonging to 11 woodcreeper species were detected. Mantel tests showed that there is no spatial autocorrelation among woodcreeper assemblage and distance between plots. Altitude and canopy openness were significantly associated with the composition of the woodcreeper assemblage. Altitude was negatively associated with species richness, and the abundance of the two dominant species (Glyphorynchus spirurus and Xiphorhynchus elegans). The negative relationship with canopy openness suggests that woodcreeper assemblages that inhabit understorey are likely to be indirectly affected by selective logging which reduces canopy cover. The selective logging indirectly changes bird species assemblages, and depending on the intensity, may result in the local extinction of some insectivorous species. Short- and long-term studies addressing different intensities of selective logging are needed to determine the impacts on the bird species and forest structure.

Vegetation and environment change mutually during secondary succession, yet the idiosyncrasies of the vegetation effect on the understorey environment are poorly understood. To test whether the successional understorey environment changes predictably and is shaped by the structure and seasonality of tropical dry forests, we estimated basal area and vegetation cover, and measured understorey temperature, light and moisture conditions, in 17 plots forming a 60-y chronosequence and a mature forest. Light and air and soil temperature decreased with time (75−15% of open-sky radiation, 31.7−29.3 °C, and +2.5 °C to −0.5 °C relative to ambient, respectively), whereas relative humidity increased (67−74%). Soil water availability increased with early-successional development (−45 to −1 kPa) but decreased afterwards (to −18 kPa). The first axis of a PCA of the rainy-season environment explained 60% of the variation and was strongly related to air temperature and relative humidity. During tropical dry-forest succession, such factors may be more important than light, the reduction in which is not extreme compared with taller and more vertically stratified wet forests. Seasonality significantly affected the successional environmental gradients, which were marked mainly during the wet season. Environmental heterogeneity was higher in the wet than in the dry season, and larger for resources (light and water) than for conditions (temperature and humidity). The wet-season increase in environmental heterogeneity potentially creates differential growing scenarios; the environmental harshness of the dry season would mostly challenge seedling survival.

Tropical rain forests harbour the most diverse plant and animal assemblages known to science, but our understanding of assemblage structure and species interactions is limited. Bats, as the only flying mammals, have the potential to exploit resources from all strata in forest communities. Thus, fruit-eating phyllostomid bats often have been categorized into canopy-, subcanopy- and understorey-foraging species, based largely upon the height at which they were most frequently captured. Here we challenge this classification and use stable carbon isotopes to assess foraging height of bat species at an Amazonian rain-forest site in Ecuador and at a Caribbean lowland rain-forest site in Costa Rica for comparison with data from mist-net captures. The proportion of the heavy stable carbon isotope 13C in relation to the lighter 12C isotope increases in plants from ground level to the canopy (0.12‰ m−1–0.18‰ m−1), and these differences in stable carbon isotope signatures are reflected in the body tissue of phytophagous bats. We used the stable carbon isotope ratio (δ13C) of wing tissue to estimate the foraging heights of 54 phyllostomid species in two Neotropical bat assemblages. Based on stable isotope data, phyllostomid species exploit food resources at all vertical strata of the forest. Capture height was not a reliable predictor of foraging height and suggests that bats most likely use lower strata to commute between foraging sites to avoid predators. Vertical stratification is likely to be a key factor promoting niche partitioning, thus promoting high local species richness in many tropical animal assemblages.

European gorse (Ulex europaeus L.) is a spiny shrub that grows spontaneously in the understorey of forests and heathlands in western Europe. Gorse is a pioneer species and forms large seed banks that can persist for a long time while buried deeply in the soil. Although many studies have been conducted on gorse seed banks in invasive contexts and in scrubland ecosystems, few data are available on forests in a native context. The aim of the present study was thus to report on the variability of seed-bank density in ‘critical’ stages in the forest management of pine stands (five stands) in south-western France. We examined variations in the number of gorse seeds as a function of soil depth but also of the presence and abundance of adult gorse in the understorey. Seed-bank density did not show a clear decrease in seed number with pine stand age, principally because gorse also appears to be able to establish itself in mature pine stands, probably thanks to local disturbances. In the pine stands in our study, the presence and abundance of seeds in the soil appeared to depend mostly on the presence of adult gorse as seeders in the understorey. Finally, we observed that, contrary to what has generally been found in scrubland ecosystems, most gorse seeds were located in the 5–10 cm soil layer rather than in the 0–5 cm soil layer. This depletion of the first 5 cm may be linked to seed germination that was not compensated for by the production of new seeds.

Aechmea magdalenae is a terrestrial bromeliad that dominates areas of forest understorey on Barro Colorado Island, Panama. Nocturnal CO2 uptake via crassulacean acid metabolism was the primary means of carbon gain under well-watered conditions and all light regimes. The ability to maintain a positive carbon balance under conditions of very low light was demonstrated by laboratory measurements of photosynthesis and forest measurements of growth. Low-light-grown juvenile rosettes had the same daily net assimilation whether tested at photon flux densities of 15 or 300 μmol m−2 s−1 Growth rates of rosettes in treefall gaps were similar to those of plants in closed canopy forest. Growth rates of forest plants were increasingly correlated with canopy openness as the wet season progressed due to increased growth by gap plants, suggesting that water availability rather than light may limit growth during the annual dry season.

Drip tips are thought to resist the growth of epiphyllous fungi, lichens, bryophytes and algae on leaf surfaces by promoting the drainage of water following rain. This hypothesis was tested by altering the tip of one leaf in each of 50 pairs of opposite leaves on plants of each of two woody species in the understorey of Barro Colorado Island, Panama. After 11 mo in situ, there were no statistical differences between the mean epiphyll cover on leaves with and leaves without drip tips. Epiphyll cover was, however, strongly correlated between the opposite leaves at a node, even though one had a drip tip and the other had the tip removed. This correlation could be due to small-scale heterogeneity of insolation, temperature and humidity in the crowns of plants. A relationship between epiphyll cover and growth of the branch containing the leaves provides qualitative support for this interpretation. It seems clear that drip tips do not have a large, consistent, easily detectable effect on epiphyll cover. However, because of the tiny cost of drip tips, reductions in epiphyll growth that are small and transitory and occur in only a portion of a plant's leaves may provide sufficient advantage to explain the evolution of drip tips. No experiment to date has been capable of detecting such effects.

Seedlings of five species in the Dipterocarpaceae were grown in experimental plots in Sabah, Malaysia. These were sited both in gaps and understorey and on alluvial and sandstone soils. Half of all seedlings were provided with a complete fertilizer. Herbivore damage levels were recorded on over 25 000 individual leaves in four surveys over the course of 2 y. Rates of herbivory were lower on mature leaves (0.07–0.8% leaf area mo−1 among species) than new leaves (2.1–4.4% leaf area mo−1). There were no overall effects of light conditions, soil type, fertilizer treatment or time on rates of herbivory. The only consistent source of variation was that between species, with the three alluvial-specialist species suffering higher rates of damage than the two sandstone-specialists. Mature leaves of alluvial species received greater damage in sandstone soils, whereas sandstone species were damaged at equivalent rates on both soil types. New leaves were more damaged on their native soil type. Published herbivory rates vary in the timescales and methods of measurement. Nevertheless, the few comparable studies confirm that herbivory rates on seedlings in tropical rain forests are remarkably constant over time and across experimental treatments.

We evaluated the effects of topography on the distribution of understorey herbs, shrubs and small trees of the pantropical genus Psychotria (Rubiaceae) in a 10000-ha rain-forest reserve in central Amazonia. As plots were long and thin, and followed altitudinal isoclines, we were able to avoid the trade off between plot size and precision of measurement of topographical variables. The minimum distance between plots (1 km) was sufficient to avoid spatial autocorrelation in topographical variables. However, indices of plot similarity based on species composition were spatially autocorrelated to distances of at least 4 km. Although Multivariate Analysis of Covariance (MANCOVA) indicated significant effects of altitude, slope, and watershed on species composition within plots, topographical variables were generally poor surrogates for species distributions. Differences between eastern and western watersheds within the reserve were not due to distance effects, and most species occurred in both watersheds, indicating that differences in species assemblages between watersheds are determined by ecological factors. Habitat specialization and local density were not clearly associated with rarity. At scales of 1–10 km, both distance and habitat affect the distribution of understorey shrubs of the genus Psychotria, but much of the variation in species abundances remains unexplained.

To study vertical gradients of arthropod species richness in tropical forests, adult chrysomelids were surveyed with similar sampling effort by beating in four plots of 0.8 ha, representative of the canopy and understorey of one wet and one dry forest in Panama. Samples included in total 4615 individuals representing 253 species, and were of similar species richness at the two study sites. At both sites, chrysomelids were significantly more species-rich in the canopy than in the understorey. The proportion of species shared between the two study sites was 24%, whereas 16% and 28% of species were shared between the canopy and understorey of the wet and dry sites, respectively. Mature trees supported more and different chrysomelid species than conspecific saplings. A higher proportion of liana feeders vs. tree feeders occurred at the dry site than at the wet site. Multivariate analyses confirmed the faunal differences between the wet and dry sites and that stratification was more marked at the wet site than at the dry site. The latter observation may relate to differences in forest physiognomy (a tall and closed canopy at the wet site) and to the high interconnectivity via lianas between the understorey and canopy at the dry site.

Occasional strong droughts are an important feature of the climatic environment of tropical rain forest in much of Borneo. This paper compares the response of a lowland dipterocarp forest at Danum, Sabah, in a period of low (LDI) and a period of high (HDI) drought intensity (1986–96, 9.98 y; 1996–99, 2.62 y). Mean annual drought intensity was two-fold higher in the HDI than LDI period (1997 v. 976 mm), and each period had one moderately strong main drought (viz. 1992, 1998). Mortality of ‘all’ trees ≥10 cm gbh (girth at breast height) and stem growth rates of ‘small’ trees 10–<50 cm gbh were measured in sixteen 0.16-ha subplots (half on ridge, half on lower slope sites) within two 4-ha plots. These 10–50-cm trees were composed largely of true understorey species. A new procedure was developed to correct for the effect of differences in length of census interval when comparing tree mortality rates. Mortality rates of small trees declined slightly but not significantly between the LDI and HDI periods (1.53 to 1.48% y−1): mortality of all trees showed a similar pattern. Relative growth rates declined significantly by 23% from LDI to HDI periods (11.1 to 8.6 mm m−1 y−1): for absolute growth rates the decrease was 28% (2.45 to 1.77 mm y−1). Neither mortality nor growth rates were significantly influenced by topography. For small trees, across subplots, absolute growth rate was positively correlated in the LDI period, but negatively correlated in the HDI period, with mortality rate. There was no consistent pattern in the responses among the 19 most abundant species (n≥50 trees) which included a proposed drought-tolerant guild. In terms of tree survival, the forest at Danum was resistant to increasing drought intensity, but showed decreased stem growth attributable to increasing water stress.

A pteropodid bat community was surveyed in a West African rain forest using mist-nets set for 3 mo in 2 consecutive years (1996-97). The captures were carried out in the understorey and in the canopy for a total of 5054 mist-net hours and were analysed to answer three main questions: (1) to what extent does the bat assemblage vary along the vertical axis, (2) does the observed vertical stratification depend on wingspan (with largest bats preferring canopy openings to the cluttered understorey) and (3) was the vertical stratification repeatable from one year to the next? Nine bat species were reported, among which two were captured exclusively in the canopy where the total capture rate tended to be higher. The community structure did not differ between the four canopy stations. Four species significantly favoured canopy, two significantly favoured understorey and two were opportunistic regarding vertical stratification. Wing size and canopy-preference index were not significantly correlated and except for Eidolon helvum, index values for the 2 sampling years were correlated. Important inter-annual and seasonal variations of species richness and capture rate were observed and these are discussed in relation to rainfall patterns and migratory behaviour of the species concerned.

Geometrid moths were collected on Mt. Kinabalu (Sabah, Malaysia) along two habitat gradients, ranging from primary rain forest to cultivated areas. During 135 nights' trapping in 1997, 4585 individuals representing 500 species were attracted by light. Primary forest samples and those from old-grown regenerated forest exhibited high diversity (Fisher's α = 75–128), while agricultural areas as well as most secondary forests had a significantly lower diversity (α = 34–61). One 15-y-old secondary forest with a rich undergrowth vegetation also housed a diverse geometrid community (α = 89). In three paired samples, diversity of geometrid moths in the canopy was equal to or lower than in the understorey. Of six habitat variables tested, only undergrowth plant species diversity emerged as a significant predictor of geometrid diversity. The NESS index, in combination with multi-dimensional scaling, was used to investigate patterns of between-habitat diversity. Of two dimensions extracted, one represented the degree of habitat disturbance, while the other separated the two study areas. Geometrid samples of strongly disturbed habitats did not converge between sites, indicating that apart from the degree of human interference the regional species pool was also important in determining similarity among local communities.

Reproductive phenology of 117 individuals from a total of 20 ginger species (Costaceae and Zingiberaceae) was monitored for up to 21 mo in a lowland mixed dipterocarp forest in the Lambir Hills National Park, Sarawak. Of these 20 species of iteroparous perennials, pollinated by either spiderhunters (Nectariniidae), medium-sized Amegilla bees (Anthophoridae), or small halictid bees (Halictidae), many reproduced more than once a year, or flowered continuously with short interruptions. Significant but weak synchronization in flowering events among conspecific individuals was detected for only two species out of the five examined (Etlingera aff. metriocheilos and Amomum somniculosum). The low synchronization within the population, the overlapping flowering among species sharing common pollinators, and the high flowering frequency for each species, contrast markedly with the reproductive phenology of hummingbird-pollinated and large bee-pollinated plants of related taxa in the Neotropics. Although the plants studied do not include all members of each pollination guild, at least one species within a guild was flowering at any time except in the spiderhunter-pollinated guild. Some bee-pollinated gingers may serve as keystone species for survival of the traplining bees living on floral nectar and pollen.