The origin of eclogite-bearing granitoid gneisses and metapelites of the Chuacús Complex is investigated. This complex represents the internal basement massif of the Guatemala Suture Zone, a part of the western North America–Caribbean plate boundary. LA-ICP-MS U-Pb and trace element zircon data are combined with whole-rock Sm-Nd and Lu-Hf isotopes to re-evaluate granitoid petrogenesis and inquire into the sedimentary record. New granitoid ages of ca. 1030–1010 Ma are reported, adding to those already known of ca. 1100, 990 and 225 Ma. Stenian A-type granitoids within the bimodal Cubulco unit formed by mixing of magmas derived from late Palaeoproterozoic crust and mantle-derived melts produced in an extensional setting during Rodinia assembly. During the Tonian, an extended (or later) period of extensional tectonics produced peraluminous granitoids (Pachajob gneiss) by anatexis of rejuvenated late Mesoproterozoic crust. After a hiatus encompassing most of the Neoproterozoic, marine sedimentation occurred between the Ediacaran and the early Palaeozoic as recorded by the Palibatz schist, a sequence formed by detritus sourced from peri-Gondwanan continental areas. No evidence of middle to late Palaeozoic magmatism or sedimentation was found in the studied area. Late Triassic granitoids (Agua Caliente unit) were produced by mixing melts from late Mesoproterozoic crust with enriched mantle magmas in response to post-collisional thinning during the western Pangea breakup. This extensional stage led to considerable thinning of the Chuacús crust and its evolution into a passive margin that would be prone to subduct during the Cretaceous.