Coiled coils consist of two or more amphipathic
α-helices wrapped around each other to form a superhelical
structure stabilized at the interhelical interface by hydrophobic
residues spaced in a repeating 3–4 sequence pattern.
Dimeric coiled coils have been shown to often form in a
single step reaction in which association and folding of
peptide chains are tightly coupled. Here, we ask whether
such a simple folding mechanism may also apply to the formation
of a three-stranded coiled coil. The designed 29-residue
peptide LZ16A was shown previously to be in a concentration-dependent
equilibrium between unfolded monomer (M), folded
dimer (D), and folded trimer (T ). We
show by time-resolved fluorescence change experiments that
folding of LZ16A to D and T can be described
by [equation] and [equation]. The following rate constants were
determined (25 °C, pH 7): k1 = 7.8
× 104 M−1 s−1,
k−1 = 0.015 s−1,
k2 = 6.5 × 105
M−1 s−1, and
k−2 = 1.1 s−1.
In a separate experiment, equilibrium binding constants were determined
from the change with concentration of the far-ultraviolet circular
dichroism spectrum of LZ16A and were in good agreement with the kinetic
rate constants according to KD =
k1/2k−1 and
KT =
k2/k−2. Furthermore,
pulsed hydrogen-exchange experiments indicated that only unfolded
M and folded D and T were significantly
populated during folding. The results are compatible with a two-step
reaction in which a subpopulation of association competent (e.g., partly
helical) monomers associate to dimeric and trimeric coiled coils.