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Pseudomonas aeruginosa Outbreak in a Neonatal Intensive Care Unit Attributed to Hospital Tap Water: Methodological and Statistical Issues to Avoid Misinterpretation

Published online by Cambridge University Press:  31 July 2017

Saeid Safiri
Affiliation:
Managerial Epidemiology Research Center, Department of Public Health, School of Nursing and Midwifery, Maragheh University of Medical Sciences, Maragheh, Iran
Erfan Ayubi*
Affiliation:
Department of Epidemiology, School of Public Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran Department of Epidemiology and Biostatistics, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
*
Address correspondence to Erfan Ayubi, MSc, PhDc, Department of Epidemiology, School of Public Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran ([email protected]).
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Abstract

Type
Letters to the Editor
Copyright
© 2017 by The Society for Healthcare Epidemiology of America. All rights reserved 

To the Editor—We were interested to read the May 2017 article by Bicking Kinsey et al.Reference Bicking Kinsey, Koirala and Solomon 1 The authors investigated an outbreak of Pseudomonas aeruginosa infections. They found that compared with controls, case patients had higher odds of being in a room without a point-of-use filter (odds ratio [OR], 37.55; 95% confidence interval [CI], 7.16–∞).Reference Bicking Kinsey, Koirala and Solomon 1

Although these results are interesting, some methodological and statistical issues should be considered. The estimated effect size for some risk factors such as unfiltered water is biased due to sparse data bias. In other words, the data are inadequate to estimate a valid and precise OR. The main indicators of sparse data bias are a huge effect-size estimate and a remarkably wide and even infinite confidence interval limit.Reference Greenland, Mansournia and Altman 2 The most common strategy to adjust sparse data bias is a correction of one-half, a conventional method in which one-half is added to each level of exposure–outcome combination prior to statistical analysis.Reference Greenland, Mansournia and Altman 2 The problem with the conventional method is that it can lead to implausible ratio estimates.Reference Greenland, Mansournia and Altman 2 Greenland and Mansournia proposed an advanced method, namely, penalization via data augmentation to adjust and minimize sparse data bias.Reference Greenland, Mansournia and Altman 2 , Reference Greenland and Mansournia 3 In this method, the effect-size estimate is assumed to falls in an acceptable and possible range, such 1/40 to 40. Using penalization, the effect-size estimates are reduced to the range specified.Reference Greenland, Mansournia and Altman 2 We analyzed the presented data in the study conducted by Bicking Kinsey using the penalization method to test how the results can be influenced by sparse data bias. We found that the unfiltered water in univariable model had an estimated OR of 17.23 (95% CI, 3.56–83.19). Thus, we think the true and valid estimated OR for unfiltered water is different than 37.55 (95% CI, 7.16, ∞) as reported in the article.

The take-home message for readers is that sparse data bias is a common bias in biomedical researchReference Ayubi and Safiri 4 Reference Safiri and Ayubi 7 ; however, it is rarely addressed in analyses. Furthermore, sparse data bias can be minimized using efficient statistical methods.

References

REFERENCES

1. Bicking Kinsey, C, Koirala, S, Solomon, B, et al. Pseudomonas aeruginosa outbreak in a neonatal intensive care unit attributed to hospital tap water. Infect Control Hosp Epidemiol 2017:18.Google Scholar
2. Greenland, S, Mansournia, MA, Altman, DG. Sparse data bias: a problem hiding in plain sight. BMJ (Clin Res) 2016;352:i1981.Google Scholar
3. Greenland, S, Mansournia, MA. Penalization, bias reduction, and default priors in logistic and related categorical and survival regressions. Statist Med 2015;34:31333143.CrossRefGoogle ScholarPubMed
4. Ayubi, E, Safiri, S. Predictors of failure after single faecal microbiota transplantation in patients with recurrent Clostridium difficile infection: results from a three-year cohort study; methodological issues. Clin Microbiol Infect 2017 Apr 22;pii: S1198–743X(17)3022830228. doi: 10.1016/j.cmi.017.04.017.Google Scholar
5. Ayubi, E, Safiri, S. Profile and outcome of first 109 cases of paediatric acute liver failure at a specialized paediatric liver unit in India: methodological issues. Liver Int 2017 Apr 19. doi: 10.1111/liv.13455.CrossRefGoogle Scholar
6. Ayubi, E, Safiri, S. Bias in association between FEV1/FVC % predicted at 7 years and asthma-COPD overlap syndrome. Am J Respir Crit Care Med 2017 Mar 31. doi: 10.1164/rccm.201702-0370LE.CrossRefGoogle Scholar
7. Safiri, S, Ayubi, E. Dual photon microscopy based quantitation of fibrosis-related parameters (q-FP) to model disease progression in steatohepatitis: Methodological issues. Hepatology 2017 May 16. doi: 10.1002/hep.29261.CrossRefGoogle Scholar