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Palmer Amaranth (Amaranthus palmeri) Identification and Documentation of ALS-Resistance in Argentina

Published online by Cambridge University Press:  20 January 2017

Sarah Berger ,
Paul T. Madeira ,
Jason Ferrell ,
Lyn Gettys ,
Sergio Morichetti ,
Juan J. Cantero  and
Cesar Nuñez
Sarah Berger
Affiliation:
Department of Agronomy, University of Florida, Gainesville, FL 32611
Paul T. Madeira
Affiliation:
USDA Invasive Plant Research Lab, Davie, FL 33314
Jason Ferrell*
Affiliation:
Department of Agronomy, University of Florida, Gainesville, FL 32611
Lyn Gettys
Affiliation:
Department of Agronomy, University of Florida, Ft. Lauderdale REC, Davie, FL 33314
Sergio Morichetti
Affiliation:
Aceitera General Deheza S.A., General Deheza, Córdoba, Argentina
Juan J. Cantero
Affiliation:
Departamento Biología Agrícola, Facultad de Agronomía y Veterinaria, UNRC, Río Cuarto, Córdoba, Argentina
Cesar Nuñez
Affiliation:
Departamento Biología Agrícola, Facultad de Agronomía y Veterinaria, UNRC, Río Cuarto, Córdoba, Argentina
*
Corresponding author's E-mail: [email protected]
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Abstract

Palmer amaranth has greatly disrupted agricultural practices in the United States with its rapid growth and rapid evolution of herbicide resistance. This weed species is now suspected in Argentina. To document whether the suspected plant populations are indeed Palmer amaranth, molecular comparisons to known standards were conducted. Additionally, these same plant populations were screened for possible herbicide resistance to several acetolactate synthase (ALS)-inhibiting herbicides. Sequencing data confirmed that suspected populations (A2, A3, A4) were indeed Palmer amaranth. Another population (A1) was tested to determine whether hybridization had occurred between Palmer amaranth and mucronate amaranth the native amaranth species of the region. Tests confirmed that no hybridization had occurred and that A1 was simply a unique phenotype of mucronate amaranth. Each population was screened for resistance to imazapic, nicosulfuron, and diclosulam. All Palmer amaranth populations from Argentina were shown to be resistant to at least one ALS-inhibiting herbicide. The populations were then subjected to further testing to identify the mutation responsible for the observed ALS resistance. All mucronate amaranth populations exhibited a mutation previously documented to confer ALS resistance (S653N). No known resistance-conferring mutations were found in Palmer amaranth.

Keywords

Diclosulamglyphosateimazapicnicosulfuronmucronate amaranth Amaranthus quitensis L.Palmer amaranth Amaranthus palmeri S. WatsAcetolactate synthase (ALS)-inhibiting herbicidesdose responsemolecular taxonomy
Type
Weed Management
Information
Weed Science , Volume 64 , Issue 2 , June 2016 , pp. 312 - 320
Copyright
Copyright © Weed Science Society of America 

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Footnotes

Associate Editor for this paper: Vijay Nandula, Mississippi State University

References

Literature Cited

Ahrens, WH, Wax, LM, Stoller, EW (1981) Identification of triazine resistant Amaranthus spp. Weed Sci 29:345–348 Google Scholar
Blattner, FR (1999) Direct amplification of the entire ITS region from poorly preserved plant material using recombinant PCR. Biotechniques 27:1180–1186 Google Scholar
Bryson, CT, DeFelice, MS, eds (2009) Weeds of the South. Athens, GA The University of Georgia Press. 34 pGoogle Scholar
Casado, C, Osuna, MD, de Prado, R (2003) Evaluation of resistance in Amaranthus quitensis (Kunth) populations to imazethapyr and other imidazolinones. Comm Agr Appl Biol Sci 68:323–329 Google Scholar
Chan, KF, Sun, M (1997) Genetic diversity and relationships detected by isozyme and RAPD analysis of crop and wild species of Amaranthus . Theor Appl Genet 95:865–873 Google Scholar
Cunningham, D (1980) Amaranthus palmeri S. Watson, Herbarium Sample. USDA North Central Region PI Station. http://www.ars-grin.gov/cgi-bin/npgs/acc/search.pl?accid=PI+633587. Accessed January 15, 2014Google Scholar
Ehleringer, J (1983) Ecophysiology of Amaranthus palmeri, a Sonoran desert summer annual. Oceologia 57:107–112 Google Scholar
Faccini, D, Vitta, JI (2005) Germination characteristics of Amaranthus quitensis as affected by seed production date and duration of burial. Weed Res 45:371–378 Google Scholar
Gaines, TA, Ward, SM, Bukun, B, Preston, C, Leach, JE (2012) Interspecific hybridization transfers a previously unknown glyphosate resistance mechanism in Amaranthus species. Evol Appl 5:29–38 Google Scholar
Gleason, HA, Cronquist, A (1991) Family Amaranthaceae, the amaranth family. Pages 104–108 in Gleason, HA, ed. Manual of Vascular Plants of Northeastern United States and Adjacent Canada. 2nd edn. New York New York Botanical Garden Google Scholar
Hall, LM, Devine, MD (1990) Cross-resistance of a chlorsulfuron-resistant biotype of Stellaria media to a triazolopyrimidine herbicide. Plant Physiol 93:962–966 Google Scholar
Heap, I (2014) The International Survey of Herbicide Resistant Weeds. http://weedscience.org. Accessed January 2, 2014Google Scholar
Horak, MJ (1994) Pigweed Identification: A Pictorial Guide to the Common Pigweeds of the Great Plains. Manhattan, KS Cooperative Extension Service, Kansas State University, 12 pGoogle Scholar
Horak, MJ, Loughin, TM (2000) Growth analysis of four Amaranthus species. Weed Sci 48:347–355 Google Scholar
Jha, P, Norsworthy, JK, Bridges, W, Riley, MB (2008). Influence of glyphosate timing and row width on Palmer amaranth (Amaranthus palmeri) and pusley (Richardia spp.) demographics in glyphosate-resistant soybean. Weed Sci 56:408–415 Google Scholar
Keeley, PE, Carter, CH, Thullen, RJ (1987) Influence of planting date on growth of Palmer amaranth (Amaranthus palmeri ). Weed Sci 35:199–204 Google Scholar
Kietlinski, KD, Jimenez, F, Jellen, EN, Maughan, PJ, Smith, SM, Pratt, DB (2014) Relationships between the weedy Amaranthus hybridus (Amaranthaceae) and the grain amaranths. Crop Sci 54:220–228 Google Scholar
Lanoue, KZ, Wolf, PG, Browning, S, Hood, EE (1996) Phylogenetic analysis of restriction-site variation in wild and cultivated Amaranthus species (Amaranthaceae). Theor Appl Genet 93:722–732 Google Scholar
Leon, F (1919) Amaranthus palmeri S. Watson, Herbarium Sample. New York Botanic Garden. http://sweetgum.nybg.org/vh/specimen.php?irn=1614916. Accessed January 2, 2014Google Scholar
Mallory, M, Hall, R, McNabb, AR, Pratt, DB, Jellen, E, Maughan, P (2008) Development and characterization of microsatellite markers for the grain amaranths (Amaranthus spp. L.). Crop Sci 48:1098–1106 Google Scholar
Maughan, PJ, Smith, SM, Fairbanks, DJ, Jellen, EN (2011) Development, characterization, and linkage mapping of single nucleotide polymorphisms in the grain amaranths (Amaranthus sp.). Plant Gen 4:1–10 Google Scholar
McNaughton, KE, Letarte, J, Lee, EA, Tardif, FJ (2005) Mutations in ALS confer herbicide resistance in redroot pigweed (Amaranthus retroflexus) and Powell amaranth (Amaranthus powellii ). Weed Sci 53:17–22 Google Scholar
Morichetti, S, Cantero, JJ, Nunez, C, Barboza, G, Espinar, L, Amuchastegui, A, Ferrell, J (2013) Sobre la presencia de Amaranthus palmeri (Amaranthaceae). Bol Soc Argent Bot 48:347–354 Google Scholar
Murray, MJ (1940) The genetics of sex determination in the family Amaranthaceae. Genetics 25:409–431 Google Scholar
Nisensohn, L, Tuesca, D (1997) Susceptibilidad de biotipos de Amaranthus quitensis a herbicidas de uso frecuente en el cultivo de soja. Pages 236–243 in Proceedings of the XIII Congreso Latinoamericano de Malezas. Buenos Aires, Argentina. Vol 3 Google Scholar
Patzoldt, WL, Tranel, PJ (2001) ALS mutations conferring herbicide resistance in waterhemp. Page 67 in Proceedings of the North Central Weed Science Society. Las Cruces, NM North Central Weed Science Society Google Scholar
Ralser, M, Quefurth, R, Warnatz, HJ, Lehrach, H, Yaspo, ML, Krobitsch, S (2006) An efficient and economic enhancer mix for PCR. Biochem Biophys Res Commun 347:747–751 Google Scholar
Sathasivan, KG, Haughn, GW, Murai, N (1990) Nucleotide sequence of a mutant acetohydroxyacidsynthase gene from an imidazolinone-resistant Arabidopsis thaliana var. Columbia. Nucleic Acids Res 18:2188 Google Scholar
Sauer, JD (1950) The grain amaranths: a survey of their history and classification. Ann Missouri Bot Gard 37:561–632 Google Scholar
Sauer, JD (1957) Recent migration and evolution of the dioecious amaranths. Evolution 11:11–31 Google Scholar
Sellers, BA, Smeda, RJ, Johnson, WG, Kendig, JA, Ellersick, MR (2003) Comparative growth of six Amaranthus species in Missouri. Weed Sci 51:329–333 Google Scholar
Senseman, SA, ed. (2007) Herbicide Handbook. 9th ed. Lawrence, KS Weed Science Society of America. 458 pGoogle Scholar
Sibony, M, Michel, A, Haas, HU, Rubin, B, Hurle, K (2001) Sulfometuron-resistant Amaranthus retroflexus: cross-resistance and molecular basis for resistance to acetolactate synthase-inhibiting herbicides. Weed Res 41:509–522 Google Scholar
Sun, M, Chen, H, Leung, GC (1999) Low-Cot DNA sequences for fingerprinting analysis of germplasm diversity and relationships in Amaranthus . Theor Appl Genet 99:464–472 Google Scholar
Tamura, K, Stecher, G, Peterson, D, Filipski, A, Kumar, S (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 30:2725–2729 Google Scholar
Tranel, PJ, Wright, TR (2002) Resistance of weeds to ALS-inhibiting herbicides: what have we learned? Weed Sci 50: 700–712 Google Scholar
Trucco, F, Jeschke, MR, Rayburn, AL, Tranel, PJ (2005) Promiscuity in weedy amaranths: high frequency of female tall waterhemp (Amaranthus tuberculatus) × smooth pigweed (A. hybridus) hybridization under field conditions. Weed Sci 53:46–54 Google Scholar
Vencill, W, Li, X, Grey, T (2013) Multiple mechanisms of Palmer amaranth (Amaranthus palmeri) resistance to ALS-inhibiting herbicides. Page 363 in Proceedings of the Weed Science Society of America. Lawrence, KS Weed Science Society of America Google Scholar
Vitta, JI, Faccini, DE, Nisensohn, LA (2000) Control of Amaranthus quitensis in soybean crops in Argentina: an alternative to reduce herbicide use. Crop Prot 19:511–513 Google Scholar
Wassom, JJ, Tranel, PJ (2005) Amplified fragment length polymorphism-based genetic relationships among weedy Amaranthus species. J Hered 96:410–416 Google Scholar
Wetzel, DK, Horak, MJ, Skinner, DZ (1999) Use of PCR-based molecular markers to identify weedy Amaranthus species. Weed Sci 47:518–523 Google Scholar
Wise, AM, Grey, TL, Prostko, EP, Vencill, WK, Webster, TM (2009) Establishing the geographical distribution and level of acetolactate synthase resistance of Palmer amaranth (Amaranthus palmeri) accessions in Georgia. Weed Technol 23:214–220 Google Scholar
Xu, F, Sun, M (2001) Comparative analysis of phylogenetic relationships of grain amaranths and their wild relatives (Amaranthus; Amaranthaceae) using internal transcribed spacer, amplified fragment length polymorphism, and double-primer fluorescent intersimple sequence repeat markers. Mol Phylogenet Evol 2:372–387 Google Scholar
Zohary, M (2003) Amaranthus palmeri S. Watson, Herbarium Sample. Royal Botanic Garden Edinburgh. http://data.rbge.org.uk/herb/E00167875. Accessed January 2, 2014Google Scholar