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Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis

Published online by Cambridge University Press:  07 July 2001

LUDMILA YU. FROLOVA
Affiliation:
Engelhardt Institute of Molecular Biology, 117984 Moscow, Russia U248 INSERM, Institut Curie, Paris 70005, France UPR41 CNRS, Universite de Rennes 1, 350042 Rennes Cedex, France
RUSLAN YU. TSIVKOVSKII
Affiliation:
Institute of Molecular Biology, NPO Vector, Koltzovo, Novosibirsk region, Russia
GALINA F. SIVOLOBOVA
Affiliation:
Institute of Molecular Biology, NPO Vector, Koltzovo, Novosibirsk region, Russia
NINA YU. OPARINA
Affiliation:
Engelhardt Institute of Molecular Biology, 117984 Moscow, Russia
OLEG I. SERPINSKY
Affiliation:
Institute of Molecular Biology, NPO Vector, Koltzovo, Novosibirsk region, Russia
VLADIMIR M. BLINOV
Affiliation:
Institute of Molecular Biology, NPO Vector, Koltzovo, Novosibirsk region, Russia
SERGEY I. TATKOV
Affiliation:
Institute of Molecular Biology, NPO Vector, Koltzovo, Novosibirsk region, Russia
LEV L. KISSELEV
Affiliation:
Engelhardt Institute of Molecular Biology, 117984 Moscow, Russia U248 INSERM, Institut Curie, Paris 70005, France
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Abstract

Although the primary structures of class 1 polypeptide release factors (RF1 and RF2 in prokaryotes, eRF1 in eukaryotes) are known, the molecular basis by which they function in translational termination remains obscure. Because all class 1 RFs promote a stop-codon-dependent and ribosome-dependent hydrolysis of peptidyl-tRNAs, one may anticipate that this common function relies on a common structural motif(s). We have compared amino acid sequences of the available class 1 RFs and found a novel, common, unique, and strictly conserved GGQ motif that should be in a loop (coil) conformation as deduced by programs predicting protein secondary structure. Site-directed mutagenesis of the human eRF1 as a representative of class 1 RFs shows that substitution of both glycyl residues in this motif, G183 and G184, causes complete inactivation of the protein as a release factor toward all three stop codons, whereas two adjacent amino acid residues, G181 and R182, are functionally nonessential. Inactive human eRF1 mutants compete in release assays with wild-type eRF1 and strongly inhibit their release activity. Mutations of the glycyl residues in this motif do not affect another function, the ability of eRF1 together with the ribosome to induce GTPase activity of human eRF3, a class 2 RF. We assume that the novel highly conserved GGQ motif is implicated directly or indirectly in the activity of class 1 RFs in translation termination.

Type
Research Article
Copyright
1999 RNA Society

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