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Short Paper: A signal-to-noise index to quantify the potential for peak detection in sediment–charcoal records

Published online by Cambridge University Press:  20 January 2017

Ryan F. Kelly*
Affiliation:
Department of Plant Biology, University of Illinois, Urbana, IL, USA
Philip E. Higuera
Affiliation:
Department of Forest Ecology and Biogeosciences, University of Idaho, Moscow, ID, USA
Carolyn M. Barrett
Affiliation:
Program in Ecology, Evolution, and Conservation Biology, University of Illinois, Urbana, IL, USA
Feng Sheng Hu
Affiliation:
Department of Plant Biology, University of Illinois, Urbana, IL, USA Program in Ecology, Evolution, and Conservation Biology, University of Illinois, Urbana, IL, USA
*
Corresponding author.

Abstract

Charcoal peaks in lake-sediment records are commonly used to reconstruct fire histories spanning thousands of years, but quantitative methods for evaluating the suitability of records for peak detection are largely lacking. We present a signal-to-noise index (SNI) that quantifies the separation of charcoal peaks (signal) from other variability in a record (noise). We validate the SNI with simulated and empirical charcoal records and show that an SNI > 3 consistently identifies records appropriate for peak detection. The SNI thus offers a means to evaluate the suitability of sediment–charcoal records for reconstructing local fires. MATLAB and R functions for calculating SNI are provided.

Type
Research Article
Copyright
University of Washington

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References

Agee, J.K. Fire Ecology of Pacific Northwest Forests. (1993). Island Press, Washington, DC.Google Scholar
Alaska Fire Service Alaska Fire History. Bureau of Land Management. Bureau of Land Management. (2004). Alaska Fire Service, Google Scholar
Bankman, I.N. Handbook of Medical Imaging—Processing and Analysis. (2000). Academic Press, Google Scholar
Carcaillet, C., Bergeron, Y., Richard, P.J.H., Frechette, B., Gauthier, S., and Prairie, Y.T. Change of fire frequency in the eastern Canadian boreal forests during the Holocene: does vegetation composition or climate trigger the fire regime?. Journal of Ecology 89, (2001). 930946.CrossRefGoogle Scholar
Casella, G., and Berger, R.L. Statistical Inference. (2002). Duxbury Press, Pacific Grove, CA.Google Scholar
Clark, J.S. Particle motion and the theory of charcoal analysis: source area, transport, deposition, and sampling. Quaternary Research 30, (1988). 6780.Google Scholar
Clark, J.S., Royall, P.D., and Chumbley, C. The role of fire during climate change in an eastern deciduous forest at Devil's Bathtub, New York. Ecology 77, (1996). 21482166.Google Scholar
Gavin, D.G., Brubaker, L.B., and Lertzman, K.P. An 1800-year record of the spatial and temporal distribution of fire from the west coast of Vancouver Island, Canada. Canadian Journal of Forest Research 33, (2003). 573586.CrossRefGoogle Scholar
Gavin, D.G., Hallett, D.J., Hu, F.S., Lertzman, K.P., Prichard, S.J., Brown, K.J., Lynch, J.A., Bartlein, P., and Peterson, D.L. Forest fire and climate change in western North America: insights from sediment charcoal records. Frontiers in Ecology and the Environment 5, (2007). 499506.CrossRefGoogle Scholar
Gavin, D.G., Hu, F.S., Lertzman, K., and Corbett, P. Weak climatic control of stand-scale fire history during the late Holocene. Ecology 87, (2006). 17221732.CrossRefGoogle ScholarPubMed
Higuera, P.E., Brubaker, L.B., Anderson, P.M., Hu, F.S., and Brown, T.A. Vegetation mediated the impacts of postglacial climate change on fire regimes in the south-central Brooks Range, Alaska. Ecological Monographs 79, (2009). 201219.Google Scholar
Higuera, P.E., Peters, M.E., Brubaker, L.B., and Gavin, D.G. Understanding the origin and analysis of sediment–charcoal records with a simulation model. Quaternary Science Reviews 26, (2007). 17901809.CrossRefGoogle Scholar
Higuera, P. E., Whitlock, C., Gage, J., (2010). Linking tree-ring and sediment–charcoal records to reconstruct fire occurrence and area burned in subalpine forests of Yellowstone National Park, U.S.A. The Holocene. doi:10.1177/0959683610374882.Google Scholar
Long, C.J., Whitlock, C., Bartlein, P.J., and Millspaugh, S.H. A 9000-year fire history from the Oregon Coast Range, based on a high-resolution charcoal study. Canadian Journal of Forest Research 28, (1998). 774787.CrossRefGoogle Scholar
Lynch, J.A., Clark, J.S., and Stocks, B.J. Charcoal production, dispersal and deposition from the Fort Providence experimental fire: interpreting fire regimes from charcoal records in boreal forests. Canadian Journal of Forest Research 34, (2004). 16421656.Google Scholar
Millspaugh, S.H., and Whitlock, C. A 750-year fire history based on lake sediment records in central Yellowstone National Park, USA. Holocene 5, (1995). 283292.Google Scholar
Peters, M.E., and Higuera, P.E. Quantifying the source area of macroscopic charcoal with a particle dispersal model. Quaternary Research 67, (2007). 304310.CrossRefGoogle Scholar
Power, M.J., Marlon, J., Ortiz, N., Bartlein, P.J., Harrison, S.P., Mayle, F.E., Ballouche, A., Bradshaw, R.H.W., Carcaillet, C., Cordova, C., Mooney, S., Moreno, P.I., Prentice, I.C., Thonicke, K., Tinner, W., Whitlock, C., Zhang, Y., Zhao, Y., Ali, A.A., Anderson, R.S., Beer, R., Behling, H., Briles, C., Brown, K.J., Brunelle, A., Bush, M., Camill, P., Chu, G.Q., Clark, J., Colombaroli, D., Connor, S., Daniau, A.L., Daniels, M., Dodson, J., Doughty, E., Edwards, M.E., Finsinger, W., Foster, D., Frechette, J., Gaillard, M.J., Gavin, D.G., Gobet, E., Haberle, S., Hallett, D.J., Higuera, P., Hope, G., Horn, S., Inoue, J., Kaltenrieder, P., Kennedy, L., Kong, Z.C., Larsen, C., Long, C.J., Lynch, J., Lynch, E.A., McGlone, M., Meeks, S., Mensing, S., Meyer, G., Minckley, T., Mohr, J., Nelson, D.M., New, J., Newnham, R., Noti, R., Oswald, W., Pierce, J., Richard, P.J.H., Rowe, C., Goni, M.F.S., Shuman, B.N., Takahara, H., Toney, J., Turney, C., Urrego-Sanchez, D.H., Umbanhowar, C., Vandergoes, M., Vanniere, B., Vescovi, E., Walsh, M., Wang, X., Williams, N., Wilmshurst, J., and Zhang, J.H. Changes in fire regimes since the Last Glacial Maximum: an assessment based on a global synthesis and analysis of charcoal data. Climate Dynamics 30, (2008). 887907.Google Scholar
Torrence, C., and Compo, G.P. A practical guide to wavelet analysis. Bulletin of the American Meteorological Society 79, (1998). 6178.Google Scholar
Whitlock, C., and Larsen, C. Charcoal as a fire proxy. In Tracking Environmental Change Using Lake Sediments. Smol, J.P., Birks, H.J.B., and Last, W.M. (2001). Kluwer Academic Publisher, Dordrecht.Google Scholar
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