We discuss the instrumental and data reduction techniques used to suppress speckle noise with the Simultaneous Differential Imager (SDI) implemented at the VLT and the MMT. SDI uses a quad filter to take images simultaneously at 3 wavelengths surrounding the 1.62 $\mu$m methane bandhead found in the spectrum of cool brown dwarfs and gas giants. By performing a difference of images in these filters, speckle noise from the primary can be significantly attenuated, resulting in photon noise limited data. Non-trivial data reduction tools are necessary to pipeline the simultaneous differential imaging. Here we discuss a custom algorithm implemented in IDL to perform this reduction. The script performs basic data reduction tasks but also precisely aligns images taken in each of the filters using a custom shift and subtract routine. In our survey of nearby young stars at the VLT and MMT (see Biller et al., this conference), we achieved H band contrasts >25000 (5$\sigma \Delta$F1(1.575 $\mu$m) >10.0 mag, $\Delta$H$\,{>}\,$11.5 mag for a T6 spectral type object) at a separation of 0.5” from the primary star. We believe that our SDI images are among the highest contrast astronomical images ever made from ground or space for methane rich companions.