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Detecting dominance QTL in poultry pedigrees using variance component methodology

Published online by Cambridge University Press:  22 November 2017

S. J. Rowe*
Affiliation:
Roslin Institute, Roslin, Midlothian, United Kingdom
R. Pong-Wong
Affiliation:
Roslin Institute, Roslin, Midlothian, United Kingdom
C.S. Haley
Affiliation:
Roslin Institute, Roslin, Midlothian, United Kingdom
S.A. Knott
Affiliation:
Edinburgh University, West mains Road, Edinburgh, United Kingdom
D.J. de Koning
Affiliation:
Roslin Institute, Roslin, Midlothian, United Kingdom
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Extract

Methods that detect QTL within commercial populations circumvent the need for expensive experimental populations and facilitate direct application of results through marker assisted selection. Variance component analysis (VCA) uses phenotypic, pedigree and marker information within a mixed linear model to simultaneously detect QTL and estimate breeding values. The inclusion of non-additive effects has potential for greater accuracy of selection and understanding of underlying mechanisms. The linear model can be extended to include higher order effects such as dominance, however, there is little information on empirical power. Here VCA was applied to real and simulated commercial broiler data to detect additive and dominant QTL effects.

Type
Theatre Presentations
Copyright
Copyright © The British Society of Animal Science 2007

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References

Pong-Wong, R., George, A.W., Woolliams, J.A., and Haley, C.S. 2001 A simple and rapid method for calculating identity-by-descent matrices using multiple markers. Genetics Selection Evolution 33: 453–471.CrossRefGoogle ScholarPubMed
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