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Screening and comprehensive evaluation of rice (Oryza sativa L. subsp. japonica Kato) germplasm resources for nitrogen efficiency in Xinjiang, China

Published online by Cambridge University Press:  05 June 2020

Chunping Jia Open the ORCID record for Chunping Jia [Opens in a new window] ,
Fengbin Wang ,
Jie Yuan ,
Yanhong Zhang ,
Zhiqiang Zhao ,
Buhaliqiemu Abulizi ,
Xiaorong Wen ,
Mintai Kang  and
Fusen Tang
Chunping Jia
Affiliation:
Xinjiang Academy of Agricultural Sciences, Institute of Nuclear Technology and Biotechnology, Urumqi830091, Xinjiang, China
Fengbin Wang*
Affiliation:
Xinjiang Academy of Agricultural Sciences, Institute of Food Crops, Urumqi830091, Xinjiang, China
Jie Yuan
Affiliation:
Xinjiang Academy of Agricultural Sciences, Institute of Nuclear Technology and Biotechnology, Urumqi830091, Xinjiang, China
Yanhong Zhang
Affiliation:
Xinjiang Academy of Agricultural Sciences, Institute of Nuclear Technology and Biotechnology, Urumqi830091, Xinjiang, China
Zhiqiang Zhao
Affiliation:
Xinjiang Academy of Agricultural Sciences, Institute of Nuclear Technology and Biotechnology, Urumqi830091, Xinjiang, China
Buhaliqiemu Abulizi
Affiliation:
Xinjiang Academy of Agricultural Sciences, Institute of Nuclear Technology and Biotechnology, Urumqi830091, Xinjiang, China
Xiaorong Wen
Affiliation:
Xinjiang Academy of Agricultural Sciences, Rice Experiment Station in Wensu, Wensu843100, Xinjiang, China
Mintai Kang
Affiliation:
Xinjiang Academy of Agricultural Sciences, Rice Experiment Station in Wensu, Wensu843100, Xinjiang, China
Fusen Tang
Affiliation:
Xinjiang Academy of Agricultural Sciences, Rice Experiment Station in Wensu, Wensu843100, Xinjiang, China
*
*Corresponding author. E-mail: [email protected]
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Abstract

Comprehensive screening of rice (Oryza sativa L. subsp. japonica Kato) germplasm resources with different nitrogen (N) efficiency levels is effective for improving N use efficiency (NUE) while reducing pollution and providing high quality, yield, and efficiency agriculture. We investigated 14 indices of 38 varieties under three N application levels to assess differences among genotypes. Rice varieties were classified for screening and identifying N efficient. Descriptive statistical analysis results indicated significant differences in relative yield, and also in NUE indices (agronomic utilization rate and partial productivity of N fertilizer). The genotype main effects and genotype–environment interaction effects (GGE) biplot analysis was used to evaluate suitable varieties, compare the stable and high yield capabilities of different varieties, find the ideal variety, and describe the correlation, discrimination and representativeness of the indices under different N application levels. Descriptive statistical, discrimitiveness and representativeness and factor analysis were used to select indices, in which the panicle number per plant and soil and plant analyzer development (SPAD) value were the key indices for evaluation and identification. Heatmap and hierarchical cluster analysis based on the average value of evaluation indices, and scatter plot based on the comprehensive value of N efficiency (P) according to formula showed that all varieties could be divided into five types under different N treatments. Our findings work toward developing N efficient rice varieties to improve NUE, reduce N fertilizer application and thus N waste, consequently mitigating the effects of rice production on the environment to ensure food security and sustainable agricultural development.

Keywords

evaluationgenotypesgermplasm resourcesnitrogen efficiencyrice (Oryza sativa L. subsp. japonica Kato)
Type
Research Article
Information
Plant Genetic Resources , Volume 18 , Issue 3 , June 2020 , pp. 179 - 189
Copyright
Copyright © NIAB 2020

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References

Ali, J, Jewel, ZA, Mahender, A, Anandan, A, Hernandez, J and Li, ZK (2018) Molecular genetics and breeding for nutrient use efficiency in rice. International Journal of Molecular Sciences 19: 1762.CrossRefGoogle ScholarPubMed
Almu, H, Rafii, MY, Sulaiman, Z, Ismail, MR, Harun, AR, Ramli A, SMYA and Halidu, J (2019) Genetic variability of rice (Oryza sativa L.) genotypes under different level of nitrogen fertilizer in Malaysia. International Journal of Plant Breeding 6: 487–497.Google Scholar
Artacho, P, Bonomelli, C and Meza, F (2009) Nitrogen application in irrigated rice grown in Mediterranean conditions: effects on grain yield, dry matter production, nitrogen uptake, and nitrogen use efficiency. Journal of Plant Nutrition 32: 1574–1593.CrossRefGoogle Scholar
Cassman, KG, Peng, S, Olk, DC, Ladha, JK, Reichardt, W, Dobermann, A and Singh, U (1998) Opportunities for increased nitrogen-use efficiency from improved resource management in irrigated rice systems. Field Crops Research 56: 7–39.CrossRefGoogle Scholar
Chen, XP, Cui, ZL, Vitousek, PM, Cassman, KG, Matson, PA, Bai, JS, Meng, QF, Hou, P, Yue, SC, Römheld, V and Zhang, FS (2011) Integrated soil-crop system management for food security. PNAS 108: 6399–6404.CrossRefGoogle ScholarPubMed
Chen, C, Gong, HQ, Zhang, JZ, Xu, YJ and Gao, HJ (2016) Evaluation of nitrogen nutrition characteristics of different rice cultivars at seedling stage. Chinese Journal of Eco-Agriculture 24: 1347–1355.Google Scholar
Cheng, JF, Dai, TB, Jing, Q, Jiang, D, Pan, XY and Cao, WX (2007) Root morphological and physiological characteristics in relation to nitrogen absorption efficiency in different rice genotypes. Acta Pedologica Sinica 44: 266–272.Google Scholar
De Datta, SK and Broadbent, FE (1990) Nitrogen-use efficiency of 24 rice genotypes on an N-deficient soil. Field Crops Research 23: 81–92.CrossRefGoogle Scholar
Deng, WK, Wang, YB, Liu, ZX, Cheng, H and Xue, Y (2014) Heml: a toolkit for illustrating heatmaps. PLoS One 9: e111988.CrossRefGoogle Scholar
Fageria, NK and Baligar, VC (2003) Methodology for evaluation of lowland rice genotypes for nitrogen use efficiency. Journal of Plant Nutrition 26: 1315–1333.CrossRefGoogle Scholar
Fageria, NK, De Morais, OP and Dos Santos, AB (2010) Nitrogen use efficiency in upland rice genotypes. Journal of Plant Nutrition 33: 1696–1711.CrossRefGoogle Scholar
Fan, M, Shen, J, Yuan, L, Jiang, R, Chen, X, Davies, WJ and Zhang, F (2012) Improving crop productivity and resource use efficiency to ensure food security and environmental quality in China. Journal of Experimental Botany 63: 13–24.CrossRefGoogle ScholarPubMed
Frutos, E, Galindo, MP and Leiva, V (2014) An interactive biplot implementation in R for modeling genotype-by-environment interaction. Stochastic Environmental Research and Risk Assessment 28: 1629–1641.CrossRefGoogle Scholar
Galloway, JN, Townsend, AR, Erisman, JW, Bekunda, M, Cai, ZC, Freney, JR, Martinelli, LA, Seitzinger, SP and Sutton, MA (2008) Transformation of the nitrogen cycle: recent trends, questions, and potential solutions. Science (New York, N.Y.) 320: 889–892.CrossRefGoogle ScholarPubMed
Guo, JX, Yang, SN, Gao, LM, Lu, ZF, Guo, JJ, Sun, YM, Kong, YL, Ling, N, Shen, QR and Guo, SW (2019) Nitrogen nutrient index and leaf function affect rice yield and nitrogen efficiency. Plant and Soil 445: 7–21.CrossRefGoogle Scholar
Haefele, SM, Jabbar, SMA, Siopongco, JDLC, Tirol-Padre, A, Amarante, ST, Sta Cruz, PC and Cosico, WC (2008) Nitrogen use efficiency in selected rice (Oryza sativa L.) genotypes under different water regimes and nitrogen levels. Field Crops Research 107: 137–146.CrossRefGoogle Scholar
Hou, WF, Xue, XX, Li, XK, Khan, MR, Yan, JY, Ren, T, Cong, RH and Lu, JW (2019) Interactive effects of nitrogen and potassium on: grain yield, nitrogen uptake and nitrogen use efficiency of rice in low potassium fertility soil in China. Field Crops Research 236: 14–23.CrossRefGoogle Scholar
Huang, YL, Li, MM, Lu, M, Wan, JL, Long, QZ, Wang, HM, Tang, XY and Fan, ZJ (2015) Selection of rice germplasm with high nitrogen utilization efficiency and its analysis of the related characters. Journal of Plant Genetic Resources 16: 87–93.Google Scholar
Jewel, ZA, Ali, J, Pang, YL, Mahender, A, Acero, B, Hernandez, J, Xu, JL and Li, ZK (2019) Developing green super rice varieties with high nutrient use efficiency by phenotypic selection under varied nutrient conditions. The Crop Journal 7: 368–377.CrossRefGoogle Scholar
Kekulandara, DS, Sirisena, DN, Bandaranayake, PCG, Samarasinghe, G, Wissuwa, M and Suriyagoda, LDB (2019) Variation in grain yield, and nitrogen, phosphorus and potassium nutrition of irrigated rice cultivars grown at fertile and low-fertile soils. Plant and Soil 434: 107–123.CrossRefGoogle Scholar
Krapp, A, Saliba-Colombani, V and Daniel-Vedele, F (2005) Analysis of C and N metabolisms and of C/N interactions using quantitative genetics. Photosynthesis Research 83: 251–263.CrossRefGoogle Scholar
Li, MM, Wan, JL, Huang, YL, Cao, GL, Chen, HP and Han, LZ (2011) Evaluation and correlation analysis of the related characters of nitrogen use efficiency for mini core collection of rice (Oryza sativa L.) in China. Journal of Plant Genetic Resources 12: 352–361.Google Scholar
Lu, DJ, Song, H, Jiang, ST, Chen, XQ, Wang, HY and Zhou, JM (2019) Managing fertiliser placement locations and source types to improve rice yield and the use efficiency of nitrogen and phosphorus. Field Crops Research 231: 10–17.CrossRefGoogle Scholar
Mae, T (1997) Physiological nitrogen efficiency in rice: nitrogen utilization, photosynthesis, and yield potential. Plant and Soil 196: 201–210.CrossRefGoogle Scholar
Namai, S, Toriyama, K and Fukuta, Y (2009) Genetic variations in dry matter production and physiological nitrogen use efficiency in rice (Oryza sativa L.) varieties. Breeding Science 59: 269–276.CrossRefGoogle Scholar
Nguyen, GN and Kant, S (2018) Improving nitrogen use efficiency in plants: effective phenotyping in conjunction with agronomic and genetic approaches. Functional Plant Biology 45: 606–619.CrossRefGoogle ScholarPubMed
Normile, D (2008) Reinventing rice to feed the world. Science (New York, N.Y.) 321: 330–333.CrossRefGoogle ScholarPubMed
Peng, SB, Garcia, FV, Laza, RC, Sanico, AL, Visperas, RM and Cassman, KG (1996) Increased N-use efficiency using a chlorophyll meter on high-yielding irrigated rice. Field Crops Research 47: 243–252.CrossRefGoogle Scholar
Peng, SB, Buresh, RJ, Huang, JL, Yang, JC, Zou, YB, Zhong, XH, Wang, GH and Zhang, FS (2006) Strategies for overcoming low agronomic nitrogen use efficiency in irrigated rice systems in China. Field Crops Research 96: 37–47.CrossRefGoogle Scholar
Peng, SB, Tang, QY and Zou, YB (2008) Current status and challenges of rice production in China. Plant Production Science 12: 3–8.CrossRefGoogle Scholar
Ruan, XM, Shi, FZ and Luo, ZX (2012) Relationship between the physiological and biochemical characteristics and the nitrogen use efficiency in the flowering stage of the rice (Oryza Sativa L.) variety with high nitrogen use efficiency. Ecology and Environment 21: 1830–1835.Google Scholar
Samonte, SOPB, Wilson, LT, Medley, JC, Pinson, SRM, McClung, AM and Lales, JS (2006) Nitrogen utilization efficiency: relationships with grain yield, grain protein, and yield-related traits in rice. Agronomy Journal 98: 168–176.CrossRefGoogle Scholar
Sharma, N, Sinha, VB, Gupta, N, Rajpal, S, Kuchi, S, Sitaramam, V, Parsad, R and Raghuram, N (2018) Phenotyping for nitrogen use efficiency: rice genotypes differ in N-responsive germination, oxygen consumption, seed urease activities, root growth, crop duration, and yield at low N. Frontiers in Plant Science 9: 1452.CrossRefGoogle ScholarPubMed
Singh, U, Ladha, JK, Castillo, EG, Punzalan, G, Tirol-Padre, A and Duqueza, M (1998) Genotypic variation in nitrogen use efficiency in medium-and long-duration rice. Field Crops Research 58: 35–53.CrossRefGoogle Scholar
Sun, YJ, Ma, J, Sun, YY, Xu, H, Yang, ZY, Liu, SJ, Jia, XW and Zheng, HZ (2012) The effects of different water and nitrogen managements on yield and nitrogen use efficiency in hybrid rice of China. Field Crops Research 127: 85–98.CrossRefGoogle Scholar
Sun, YJ, Sun, YY, Yan, FJ, Yang, ZY, Xu, H, Li, Y, Wang, HY and Ma, J (2017) Effects of postponing nitrogen topdressing on post-anthesis carbon and nitrogen metabolism in rice cultivars with different nitrogen use efficiencies. Acta Agronomica Sinica 43: 407–419.CrossRefGoogle Scholar
Vijayalakshmi, P, Vishnukiran, T, Kumari, BR, Srikanth, B, Rao, IS, Swamy, KN, Surekha, K, Sailaja, N, Subbarao, LV, Rao, PR, Subrahmanyam, D, Neeraja, CN and Voleti, SR (2015) Biochemical and physiological characterization for nitrogen use efficiency in aromatic rice genotypes. Field Crops Research 179: 132–143.CrossRefGoogle Scholar
Wei, HY, Zhang, HC, Dai, QG, Huo, ZY, Xu, K, Hang, J, Ma, Q, Zhang, SF, Zhang, Q and Liu, YY (2007) Characteristics of matter production and accumulation in rice genotypes with different N use efficiency. Acta Agronomica Sinica 33: 1802–1809.Google Scholar
Wu, LL, Yuan, S, Huang, LY, Sun, F, Zhu, GL, Li, GH, Fahad, S, Peng, SB and Wang, F (2016) Physiological mechanisms underlying the high-grain yield and high-nitrogen use efficiency of elite rice varieties under a low rate of nitrogen application in China. Frontiers in Plant Science 7: 1024.CrossRefGoogle Scholar
Xu, FX, Xiong, H, Xie, R, Zhang, L, Zhu, YC, Guo, XY, Yang, DJ, Zhou, XB and Liu, M (2009) Advance of rice fertilizer-nitrogen use efficiency. Plant Nutrition and Fertilizer Science 15: 1215–1225.Google Scholar
Yang, H, Yang, JP, Lv, YM and He, JJ (2014) SPAD Values and nitrogen nutrition index for the evaluation of rice nitrogen status. Plant Production Science 17: 81–92.CrossRefGoogle Scholar
Yin, CY, Zhang, Q, Wei, HY, Zhang, HC, Dai, QG, Huo, ZY, Xu, K, Ma, Q, Hang, J and Zhang, SF (2010) Differences in nitrogen absorption and use efficiency in rice genotypes with different yield performance. Scientia Agricultura Sinica 43: 39–50.Google Scholar
Yu, CQ, Huang, X, Chen, H, Godfray, HCJ, Wright, JS, Hall, J, Gong, P, Ni, SQ, Qiao, SC, Huang, GR, Xiao, YC, Zhang, J, Feng, Z, Ju, XT, Ciais, P, Stenseth, NC, Hessen, DO, Sun, ZL, Yu, L, Cai, WJ, Fu, HH, Huang, XM, Zhang, C, Liu, HB and Taylor, J (2019) Managing nitrogen to restore water quality in China. Nature 567: 516–520.CrossRefGoogle ScholarPubMed
Zhang, ZH and Chu, CC (2020) Nitrogen-use divergence between indica And japonica Rice: variation at nitrate assimilation. Molecular Plant 13: 6–7.CrossRefGoogle ScholarPubMed
Zhang, YL, Fan, JB, Wang, DS and Shen, QR (2009) Genotypic differences in grain yield and physiological nitrogen use efficiency among rice cultivars. Pedosphere 19: 681–691.CrossRefGoogle Scholar
Zhang, FS, Chen, XP and Peter, V (2013) Chinese Agriculture: an experiment for the world. Nature 497: 33–35.CrossRefGoogle ScholarPubMed
Zhang, XG, Xu, CM, Chen, S, Ji, CL, Zhang, XF and Wang, DY (2015) Absorption characteristics of ammonium lon of roots in different nitrogen use efficiency rice varieties. Scientia Agricultura Sinica 48: 4428–4436.Google Scholar
Zhang, ZH, Gao, SP and Chu, CC (2020) Improvement of nutrient use efficiency in rice: current toolbox and future perspectives. Theoretical and Applied Genetics 133: 1365–1384.CrossRefGoogle ScholarPubMed
Zhao, GM, Miao, YX, Wang, HY, Su, MM, Fan, MS, Zhang, FS, Jiang, RF, Zhang, ZJ, Liu, C, Liu, PH and Ma, DQ (2013) A preliminary precision rice management system for increasing both grain yield and nitrogen use efficiency. Field Crops Research 154: 23–30.CrossRefGoogle Scholar
Zhou, W, Yang, ZP, Wang, T, Fu, Y, Chen, Y, Hu, BH, Yamagishi, J and Ren, WJ (2019) Environmental compensation effect and synergistic mechanism of optimized nitrogen management increasing nitrogen use efficiency in indica hybrid rice. Frontiers in Plant Science 10: 245.CrossRefGoogle ScholarPubMed
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