Hostname: page-component-cd9895bd7-q99xh Total loading time: 0 Render date: 2024-12-24T03:07:33.755Z Has data issue: false hasContentIssue false
  • English
  • Français

Bioprospecting for fertility restoration genes in wild relatives and land races of rice from different geographic regions

Published online by Cambridge University Press:  27 March 2017

Amit Kumar Dash ,
Rashmita Samal ,
Jwala Narasimha Rao Gundimeda ,
Hata Nath Subudhi  and
Nageswara Rao Ravi
Amit Kumar Dash
Affiliation:
Crop Improvement Division, National Rice Research Institute, Cuttack - 753006, Odisha, India
Rashmita Samal
Affiliation:
Crop Improvement Division, National Rice Research Institute, Cuttack - 753006, Odisha, India
Jwala Narasimha Rao Gundimeda*
Affiliation:
Crop Improvement Division, National Rice Research Institute, Cuttack - 753006, Odisha, India
Hata Nath Subudhi
Affiliation:
Crop Improvement Division, National Rice Research Institute, Cuttack - 753006, Odisha, India
Nageswara Rao Ravi
Affiliation:
Crop Improvement Division, National Rice Research Institute, Cuttack - 753006, Odisha, India
*
*Corresponding author. E-mail: [email protected]
Get access Rights & Permissions [Opens in a new window]

Abstract

Hybrid rice development, a major advance in rice breeding, has demonstrated its immense potential in enhancing the rice productivity. In the three line system of hybrid rice, the restoration of fertility of the widely used wild-abortive type of cytoplasmic male sterility is controlled by Rf3 and Rf4, two fertility restoration genes. Exploration for restorers in diverse genetic backgrounds is a critical step in hybrid rice breeding. As genetic resources constitute the major source of new genes/alleles, an attempt was made to assess the distribution of these two restorer genes in the native populations collected from the geographic regions known to be the primary and secondary centres of origin of rice. In addition, assays were performed on the populations of Oryza rufipogon and Oryza nivara, the wild progenitors of rice. The results suggest that the Rf genes are well distributed in the wild forms at a higher frequency, more in O. rufipogon, while in cultivated forms, their frequency is low, particularly for the Rf3 gene. The genes and the alleles identified in the genetically divergent, low-performing land races and wild relatives can be successfully employed for the development of new hybrid rice cultivars.

Keywords

Assamcytoplasmic male sterilityfertility restorationhybrid riceJeyporeWA type
Type
Research Article
Information
Plant Genetic Resources , Volume 16 , Issue 1 , February 2018 , pp. 89 - 93
Copyright
Copyright © NIAB 2017 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Balaji, SP, Srikanth, B, Hemanth, KV, Subhakara, RI, Vemireddy, LR, Dharika, N, Sundaram, RM, Ramesha, MS, Sambasiva Rao, KRS, Viraktamath, BC and Neeraja, CN (2012) Fine mapping of Rf3 and Rf4 fertility restorer loci of WA-CMS of rice (Oryza sativa L.) and validation of the developed marker system for identification of restorer lines. Euphytica 187: 42–435.Google Scholar
Barbier, P (1989) Genetic variation and ecotypic differentiation in the wild rice species Oryza rufipogon. II. Influence of the mating system and life-history traits on the genetic structure of populations. Japanese Journal of Genetics 64: 273–285.Google Scholar
Brar, DS and Khush, GS (2003) Utilization of wild species of genus Oryza in rice improvement. In: Nanda, JS and Sharma, SD (eds) Monograph on Genus Oryza. pp. 283–309. Enfield, NH: Science Publishers, Inc.Google Scholar
Doyle, JJ and Doyle, JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19: 11–15.Google Scholar
Hossain, MD, Singh, AK and Zaman, F (2010) Genetics of fertility restoration of ‘WA’ based cytoplasmic male sterility system in rice (Oryza sativa L.) using indica/japonica derivative restorers. Science Asia 36: 94–99.Google Scholar
Jian, C, Liao, QP, Dai, ZJ, Zhu, HT, Zeng, RZ, Zhang, ZM and Zhang, GQ (2013) Allelic differentiations and effects of the Rf3 and Rf4 genes on fertility restoration in rice with wild abortive cytoplasmic male sterility. Biologia plantarum 57: 274–280.Google Scholar
Jian, C and Zhang, GQ (2012) Evaluation of restorability of two fertility restorer genes in the rice chromosome single segment substitution lines (SSSLs). Acta Agronomica Sinica 38: 2198–2205.Google Scholar
Kaul, MLH (1988) Male-sterility in Higher Plants. New York: Springer Verlag, pp. 1005.Google Scholar
Kazama, T and Toriyama, K (2014) A fertility restorer gene, Rf4, widely used for hybrid rice breeding encodes a pentatricopeptide repeat protein. Rice 7, 28.Google Scholar
Lin, S and Yuan, L (1980) Hybrid rice breeding in China. In: Argosino, G, Durvasula, VS and Smith, WH (eds) Innovative Approaches to Rice Breeding. Manila: International Rice Research Institute, pp. 35–51.Google Scholar
Morishima, H, Sano, Y and Oka, HI (1984) Differentiation of perennial and annual types due to habitat conditions in the wild rice Oryza perennis . Plant Systematics and Evolution 144: 119–135.Google Scholar
Oka, HI and Chang, WT (1962) Rice varieties intermediate between wild and cultivated forms and the origin of the japonica type. Botanical Bulletin – Academia Sinica 3: 109–131.Google Scholar
Ramiah, K and Ghose, RLM (1951) Origin and distribution of cultivated plants of South Asia: rice. Indian Journal of Genetics and Plant Breeding 11: 7–13.Google Scholar
Ramiah, K and Rao, MBVN (1953) Rice Breeding and Genetics. New Delhi: Indian Council of Agricultural Research.Google Scholar
Richharia, RH and Govindaswami, S (1990) Rices of India. Karjat, Maharashtra, India: Academy of Development Sciences.Google Scholar
Sampath, S (1962) The genus Oryza: its taxonomy and inter-relationships. Oryza 1: 1–29.Google Scholar
Sharma, SD and Shastry, SVS (1965) Taxonomic studies in the genus Oryza L. III. O. rufipogon Griff. sensu stricto and O. nivara Sharma et Shastry nom. nov. Indian Journal of Genetics and Plant Breeding 25: 157–167.Google Scholar
Singh, AK, Mahapatra, T, Prabhu, KV, Singh, VP, Zaman, FU, Mishra, GP, Nandakumar, N, Joseph, M, Gopalakrishnan, S, Aparajita, G, Tyagi, NK, Prakash, P, Sharma, RK, Shab, US and Singh, SK (2005) Application of molecular markers in rice breeding: progress at IARI. In: Advances in Marker-assisted Selection Workshop. Trainee's Manual, Handouts and References. New Delhi: IARI.Google Scholar
Sun, G, Wang-Pruski, G, Mayich, M and De Jong, H (2003) RAPD and pedigree-based genetic diversity estimates in cultivated diploid potato hybrids. Theoretical and Applied Genetics 107: 110–115.Google Scholar
Tan, XL and Trangoonrang, S (1998) Genetic analysis of rice CMS-WA fertility restoration based on QTL mapping. Theoretical and Applied Genetics 96: 994–999.Google Scholar
Tang, H, Luo, D, Zhou, D, Zhang, Q, Tian, D, Zheng, X, Chen, L and Liu, YG (2014) The rice restorer Rf4 for wild-abortive cytoplasmic male sterility encodes a PPR protein that functions in reduction of WA352 transcripts. Molecular Plant 7: 1497–1500.Google Scholar
Tanksley, SD and McCouch, SR (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277: 1063–1066.Google Scholar
Wang, ZY, Second, G and Tanksley, SD (1992) Polymorphism and phylogenetic relationships among species in the genus Oryza as determined by analysis of nuclear RFLPs. Theoretical and Applied Genetics 83: 565–581.Google Scholar
Yuan, LP (1977) The execution and theory of developing hybrid rice. Zhonggue. Nongye Kexue (Chinese Agricultural Science) 1: 27–31 (in Chinese).Google Scholar
Yuan, LP (1994) Increasing yield potential in rice by exploitation of heterosis. In: Virmani, SS (ed.) Hybrid Rice Technology: New Developments and Future Prospects. Manila: International Rice Research Institute, pp. 1–6.Google Scholar
Zhang, G, Bharaj, TS, Lu, Y, Virmani, SS and Huang, N (1997) Mapping of the Rf-3 nuclear fertility-restoring gene for WA cytoplasmic male sterility in rice using RAPD and RFLP markers. Theoretical and Applied Genetics 94: 27–33.Google Scholar
Zhang, QY, Liu, YG and Mei, MT (2002) Molecular mapping of the fertility restorer gene Rf4 for WA cytoplasmic male sterility. Acta Getetica Sinica 29: 1001–1004.Google Scholar
Supplementary material: File

Dash supplementary material

Table S1

Download Dash supplementary material(File)
File 57.7 KB