Hostname: page-component-586b7cd67f-dsjbd Total loading time: 0 Render date: 2024-11-22T13:22:29.970Z Has data issue: false hasContentIssue false

How to Model Mechanistic Hierarchies

Published online by Cambridge University Press:  01 January 2022

Abstract

Mechanisms are usually viewed as hierarchical, with lower levels of a mechanism influencing, and decomposing, its higher-level behavior. To draw quantitative predictions from a model of a mechanism, the model must capture this hierarchical aspect. Recursive Bayesian networks (RBNs) were put forward by Lorenzo Casini et al. as a means to model mechanistic hierarchies by decomposing variables into their constituting causal networks. The proposal was criticized by Alexander Gebharter. He proposes an alternative formalism, which instead decomposes arrows. Here, I defend RBNs from the criticism and argue that they offer a better representation of mechanistic hierarchies than the rival account.

Type
Adequacy of Causal Graphs and Bayes Networks
Copyright
Copyright © The Philosophy of Science Association

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

Footnotes

I thank the Lake Geneva Biological Interest Group and the audience of the Philosophy of Science Association symposium in Chicago, November 6–8, 2014, where this article was presented. I am especially grateful to Michael Baumgartner, Alexander Gebharter, Guillaume Schlaepfer, and Jon Williamson. This work was supported by the Swiss National Science Foundation (grant CRSII 1_147685/1).

References

Baumgartner, M., and Casini, L.. 2017. “An Abductive Theory of Constitution.” Philosophy of Science 84 (2), forthcoming.CrossRefGoogle Scholar
Baumgartner, M., and Gebharter, A.. 2016. “Constitutive Relevance, Mutual Manipulability, and Fat-Handedness.” British Journal for the Philosophy of Science 67 (3): 731–56.CrossRefGoogle Scholar
Casini, L., Illari, P. M., Russo, F., and Williamson, J.. 2011. “Models for Prediction, Explanation and Control: Recursive Bayesian Networks.” Theoria 26 (70): 533.Google Scholar
Craver, C. F. 2007. Explaining the Brain. Oxford: Oxford University Press.CrossRefGoogle Scholar
Craver, C. F., and Bechtel, W.. 2007. “Top-Down Causation without Top-Down Causes.” Biology and Philosophy 22 (4): 547–63.CrossRefGoogle Scholar
Gebharter, A. 2014. “A Formal Framework for Representing Mechanisms?Philosophy of Science 81 (1): 138–53.CrossRefGoogle Scholar
Gebharter, A., and Kaiser, M. I.. 2014. “Causal Graphs and Biological Mechanisms.” In Explanation in the Special Sciences: The Case of Biology and History, ed. Kaiser, M. I., Scholz, O., Plenge, D., and Hüttemann, A., 5585. Dordrecht: Springer.CrossRefGoogle Scholar
Pearl, J. 2000. Causality: Models, Reasoning, and Inference. Cambridge: Cambridge University Press.Google Scholar
Williamson, J. 2005. Bayesian Nets and Causality: Philosophical and Computational Foundations. Oxford: Oxford University Press.Google Scholar
Williamson, J. 2010. In Defence of Objective Bayesianism. Oxford: Oxford University Press.CrossRefGoogle Scholar
Woodward, J. 2003. Making Things Happen: A Theory of Causal Explanation. Oxford: Oxford University Press.Google Scholar