Single crystal 3C-SiC epitaxial layers have been grown on SOI substrates using low-pressure chemical vapour deposition (LPCVD). The SOI substrates consist of nominally 150 Å Si layers bonded to 100 mm poly 3C-SiC substrates using direct wafer bonding and SOI film transfer techniques. Miscut Si(100) films were incorporated into the wafer bonding process for the first time in an effort to further reduce anti-phase domain formation in the 3C-SiC films. The Si films were transferred from Si(100) wafers miscut 4° toward the (110) direction. For growth of 3C-SiC layers, a two-step process is needed. First the Si is carbonized using propane mixed in a hydrogen carrier gas to convert the surface to SiC at atmospheric pressure. Next SiC growth is conducted by the addition of silane into the gas mix and a reduction of the process to 150 Torr. Previous characterization of these films via SEM and XRD indicated that the films were single crystal and oriented with respect to the starting Si bonded film. In this work we present results of TEM analysis of these films which show details of the atomic structure at the 3C-SiC/poly-crystalline SiC interface where a thin (6 nm thick) amorphous region has been detected, likely due to SiO2 used to wafer bond the Si film to the poly substrate. A detailed study of this material system is presented with the aim of providing feedback for possible improvements in the 3C-SiC growth process.