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The phylogenetic position of Culbersonia is in the Caliciaceae (lichenized ascomycetes)

Published online by Cambridge University Press:  26 April 2019

André Aptroot Open the ORCID record for André Aptroot [Opens in a new window] ,
Khumbudzo Walter Maphangwa ,
Luciana Zedda ,
Memory Tekere ,
Pablo Alvarado  and
Harrie J. M. Sipman
André Aptroot
Affiliation:
Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva s/n, Bairro Universitário, CEP 79070-900, Campo Grande, Matto Grosso do Sul, Brazil. Email: [email protected].
Khumbudzo Walter Maphangwa
Affiliation:
Department of Environmental Sciences, University of South Africa (Science Campus), P.O. Box X6, Florida, 1710, South Africa.
Luciana Zedda
Affiliation:
BIO-Diverse, Ließemer Straße 32a, 53179 Bonn, Germany.
Memory Tekere
Affiliation:
Department of Environmental Sciences, University of South Africa (Science Campus), P.O. Box X6, Florida, 1710, South Africa.
Pablo Alvarado
Affiliation:
ALVALAB, Av. Bruselas 2 3B, 33011 Oviedo, Spain.
Harrie J. M. Sipman
Affiliation:
Botanischer Garten und Botanisches Museum, Freie Universität, Königin-Luise-Straße 6–8, 14195 Berlin, Germany.
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Abstract

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Type
Short Communication
Information
The Lichenologist , Volume 51 , Issue 2 , March 2019 , pp. 187 - 191
Copyright
Copyright © British Lichen Society 2019 

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References

Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1997) Basic local alignment search tool. Journal of Molecular Biology 215: 403–410.Google Scholar
Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17: 540–552.Google Scholar
Cubeta, M. A., Echandi, E., Abernethy, T. & Vilgalys, R. (1991) Characterization of anastomosis groups of binucleate Rhizoctonia species using restriction analysis of an amplified ribosomal RNA gene. Phytopathology 81: 1395–1400.Google Scholar
Esslinger, T. L. (2000) Culbersonia americana, a rare new lichen (Ascomycota) from western America. Bryologist 103: 771–773.Google Scholar
Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes – application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113–118.Google Scholar
Gaya, E., Högnabba, F., Holguin, Á., Molnar, K., Fernández-Brime, S., Stenroos, S., Arup, U., Søchting, U., van den Boom, P., Lücking, R., et al. (2012) Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota). Molecular Phylogenetics and Evolution 63: 374–387.Google Scholar
Helms, G., Friedl, T. & Rambold, G. (2003) Phylogenetic relationships of the Physciaceae inferred from rDNA sequence data and selected phenotypic characters. Mycologia 95: 1078–1099.Google Scholar
Lücking, R., Hodkinson, B. P. & Leavitt, S. D. (2016) The 2016 classification of lichenized fungi in the Ascomycota and Basidiomycota – approaching one thousand genera. Bryologist 119: 361–416.Google Scholar
Maphangwa, K. W., Sipman, H. J. M., Tekere, M. & Zedda, L. (2018) Epiphytic lichen diversity on Jacaranda and Acacia trees in Pretoria (Tshwane, Republic of South Africa). Herzogia 31: 949–964.Google Scholar
Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., Gaya, E., Hafellner, J., Hofstetter, V., Gueidan, C., et al. (2014) A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution 79: 132–168.Google Scholar
Moberg, R. (1980) Studies on Physciaceae (Lichens) 1. A new species of Pyxine. Norwegian Journal of Botany 27: 189–191.Google Scholar
Moberg, R. (2004) Notes on foliose species of the lichen familiy Physciaceae in southern Africa. Symbolae Botanicae Upsalienses 34: 257–288.Google Scholar
Murray, M. G. & Thompson, W. F. (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Research 8: 4321–4325.Google Scholar
IIINash, T. H., Ryan, B. D., Gries, C. & Bungartz, F. (eds) (2002) Lichen Flora of the Greater Sonoran Desert Region, Vol. 1. Tempe, Arizona: Lichens Unlimited, Arizona State University.Google Scholar
Nylander, J. A. A. (2004) MrModeltest v2. Program distributed by the author. Uppsala: Evolutionary Biology Centre, Uppsala University.Google Scholar
Obermayer, W., Kalb, K., Sipman, H. J. M. & Nash, T. H. III (2009) New reports of Culbersonia nubila (Moberg) Essl. from the Tibetan Region, Bolivia, Argentina, Lesotho and South Africa. Lichenologist 41: 683–687.Google Scholar
Prieto, M. & Wedin, M. (2017) Phylogeny, taxonomy and diversification events in the Caliciaceae. Fungal Diversity 82: 221–238.Google Scholar
Ronquist, F. & Huelsenbeck, J. P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574.Google Scholar
Schmull, M., Miadlikowska, J., Pelzer, M., Stocker-Wörgötter, E., Hofstetter, V., Fraker, E., Hodkinson, B. P., Reeb, V., Kukwa, M., Lumbsch, H. T., et al. (2011) Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota). Mycologia 103: 983–1003.Google Scholar
Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688–2690.Google Scholar
Swinscow, T. D. V. & Krog, H. (1988) Macrolichens of East Africa. London: British Museum (Natural History).Google Scholar
Swofford, D. L. (2001) PAUP*4.0b10: Phylogenetic Analysis Using Parsimony (and Other Methods). Sunderland, Massachusetts: Sinauer Associates.Google Scholar
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 28: 2731–2739.Google Scholar
Tibell, L. (1984) A reappraisal of the taxonomy of Caliciales. Beiheft zur Nova Hedwigia 79: 597–713.Google Scholar
Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238–4246.Google Scholar
Wedin, M., Baloch, E. & Grube, M. (2002) Parsimony analyses of mtSSU and nITS rDNA sequences reveal the natural relationships of the lichen families Physciaceae and Caliciaceae. Taxon 51: 655–660.Google Scholar
White, T. J., Bruns, T., Lee, S. & Taylor, J. W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (Innis, M. A., Gelfand, D. H., Sninsky, J. J. & White, T. J., eds): 315–322. New York: Academic Press.Google Scholar