Combustion instability analysis in annular systems often relies on reduced-order models that represent the complexity of combustion dynamics in a framework in which the flame is represented by a ‘flame describing function’ (FDF), portraying its heat release rate response to acoustic disturbances. However, in most cases, FDFs are only available for a limited range of disturbance amplitudes, complicating the description of the saturation process at high oscillation levels leading to the establishment of a limit cycle. This article shows that this difficulty may be overcome using a novel experimental scheme, relying on injector staging and in which the oscillation amplitude at limit cycle can be controlled, enabling us to measure FDFs from simultaneous pressure and heat release rate recordings. These data are then exploited to replace the standard modelling, in which the heat release rate is expressed as a third-order polynomial of pressure fluctuations, by a function of the modulation amplitude, allowing an easier adaptation to experimental data. The FDF is then used in a dynamical framework to analyse a set of staging configurations in an annular combustor, where two families of injectors are mixed and form different patterns. The limit-cycle amplitudes and the coupling modes observed experimentally are suitably retrieved. Finally, an expression for the growth rate is derived from the slow-flow variable equations defining the modal amplitudes and phase functions, which is shown to exactly agree with that obtained previously by using acoustic energy principles, providing a theoretical link between growth rates and limit-cycle amplitudes.