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Stochastic dynamics of active swimmers in linear flows

Published online by Cambridge University Press:  21 February 2014

Mario Sandoval ,
Navaneeth K. Marath ,
Ganesh Subramanian  and
Eric Lauga
Mario Sandoval*
Affiliation:
Department of Mechanical and Aerospace Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0411, USA Department of Physics, Universidad Autonoma Metropolitana-Iztapalapa, Apartado Postal 55-534, Mexico, Distrito Federal 09340, Mexico
Navaneeth K. Marath
Affiliation:
Engineering Mechanics Unit, JNCASR, Bangalore 560064, India
Ganesh Subramanian
Affiliation:
Engineering Mechanics Unit, JNCASR, Bangalore 560064, India
Eric Lauga
Affiliation:
Department of Mechanical and Aerospace Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0411, USA Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Centre for Mathematical Sciences, Wilberforce Road, Cambridge CB3 0WA, UK
*
†Email address for correspondence: [email protected]
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Abstract

Most classical work on the hydrodynamics of low-Reynolds-number swimming addresses deterministic locomotion in quiescent environments. Thermal fluctuations in fluids are known to lead to a Brownian loss of the swimming direction, resulting in a transition from short-time ballistic dynamics to effective long-time diffusion. As most cells or synthetic swimmers are immersed in external flows, we consider theoretically in this paper the stochastic dynamics of a model active particle (a self-propelled sphere) in a steady general linear flow. The stochasticity arises both from translational diffusion in physical space, and from a combination of rotary diffusion and so-called run-and-tumble dynamics in orientation space. The latter process characterizes the manner in which the orientation of many bacteria decorrelates during their swimming motion. In contrast to rotary diffusion, the decorrelation occurs by means of large and impulsive jumps in orientation (tumbles) governed by a Poisson process. We begin by deriving a general formulation for all components of the long-time mean square displacement tensor for a swimmer with a time-dependent swimming velocity and whose orientation decorrelates due to rotary diffusion alone. This general framework is applied to obtain the convectively enhanced mean-squared displacements of a steadily swimming particle in three canonical linear flows (extension, simple shear and solid-body rotation). We then show how to extend our results to the case where the swimmer orientation also decorrelates on account of run-and-tumble dynamics. Self-propulsion in general leads to the same long-time temporal scalings as for passive particles in linear flows but with increased coefficients. In the particular case of solid-body rotation, the effective long-time diffusion is the same as that in a quiescent fluid, and we clarify the lack of flow dependence by briefly examining the dynamics in elliptic linear flows. By comparing the new active terms with those obtained for passive particles we see that swimming can lead to an enhancement of the mean-square displacements by orders of magnitude, and could be relevant for biological organisms or synthetic swimming devices in fluctuating environmental or biological flows.

JFM classification

Biological Fluid Dynamics: Biological Fluid Dynamics
Type
Papers
Information
Journal of Fluid Mechanics , Volume 742 , 10 March 2014 , pp. 50 - 70
Copyright
© 2014 Cambridge University Press 

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