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High prevalence of multidrug-resistant bacteria on patient medical file surfaces at five critical care units in Kampala, Uganda: an explanatory sequential mixed-methods study

Published online by Cambridge University Press:  27 February 2025

Margaret Kyamulabi
Affiliation:
Institute of Public Health and Management, Clarke International University, Kampala, Uganda
Jonathan Izudi
Affiliation:
Department of Community Health, Faculty of Medicine, Mbarara University of Science and Technology, Mbarara, Uganda Data Synergy and Evaluation Unit, African Population and Health Research Center (APHRC), Nairobi, Kenya
Andrew Mujugira
Affiliation:
Infectious Diseases Institute, Makerere University, Kampala, Uganda Department of Global Health, University of Washington, Seattle, USA
Stephen Okoboi*
Affiliation:
Infectious Diseases Institute, Makerere University, Kampala, Uganda
*
Corresponding author: Stephen Okoboi; Email: [email protected]
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Abstract

Type
Letter to the Editor
Copyright
© The Author(s), 2025. Published by Cambridge University Press on behalf of The Society for Healthcare Epidemiology of America

Introduction

Intensive care units (ICUs) and high-dependency units (HDUs) care for critically ill patients, many of whom have multidrug-resistant (MDR) bacteria.Reference Lakbar, Medam and Ronflé1,Reference Tosi, Roat and De Biasi2 Healthcare providers (HCPs) interact with patients and their medical records in these settings daily. For example, HCPs often place patient files near the bedside and in various locations throughout the units, which may increase the risk of transferring MDR among patients and providers.Reference Tosi, Roat and De Biasi2 In Uganda, most health facilities rely on a paper-based system for recording and storing patient clinical data,Reference Basajja and Nambobi3 raising concerns about cross-contamination of bacteria and hospital-acquired infections. Nevertheless, research on MDR contamination of patient medical records in Ugandan ICUs and HDUs remains sparse. To address this gap, our study investigated the prevalence and distribution of MDR bacteria on the surfaces of patient medical files. Additionally, we explored HCP perspectives regarding infection prevention and control (IPC) at three ICUs and two HDUs in Kampala through an explanatory sequential mixed-methods approach.Reference Chebet and Izudi4

Methods

We studied three ICUs – the cardiac ICU at Uganda Heart Institute, the pediatric and main ICUs at Mulago National Referral Hospital (MNRH) – and two HDUs at MNRH in Uganda. First, we conducted a descriptive cross-sectional study that used simple random sampling to select patient medical files through unique codes recorded in a health information electronic system. We included 33 out of 40 medical files based on Kish and Leslie’s formula for finite population, assuming a 95% confidence level, a 50% outcome prevalence, and a 5% sampling error. Specimens from files not expected to be cleaned or disinfected daily were collected one hour after the unit’s daily cleaning and disinfection. We used Copan’s Flexible Minitip Flocked Swab with Liquid Amies Medium, manufactured by Murrieta, United States, to swab a standardized surface area of 10 centimeters squared per file. Specimen collection occurred one hour after daily cleaning and disinfection of the units to maintain consistent exposure conditions. Swabs were collected in liquid Amies transport media, clearly labeled with the specimen source, collection date, and time. Samples were transported to the Makerere University Medical Microbiology Laboratory, where a certified Senior Medical Microbiologist conducted testing for World Health Organization priority pathogens: Enterococcus, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, and Pseudomonas aeruginosa. Upon arrival, the specimens were immediately plated on sheep blood agar to isolate Staphylococcus aureus, and MacConkey agar for isolating gram-negative organisms.

MDR was defined as laboratory confirmation of the WHO priority pathogens following the 33rd edition of the Clinical Laboratory Standards Institute on Antimicrobial Susceptibility testing guidelines for antibiotic susceptibility interpretation.Reference Weinstein5,Reference Teng, Lee, Ou, Hsieh, Lee and Lin6 We descriptively summarized the data by computing the prevalence of MDR bacteria on medical record surfaces. Second, we purposively sampled HCPs, specifically Heads of ICUs and HDUs, as key informants for our interviews, which offered valuable insights into IPC measures in their units. All interviews were audio-recorded, transcribed verbatim, and independently coded by two analysts to prevent subjective bias and maintain methodological rigor in our thematic analysis. Quantitative and qualitative results were jointly interpreted. Clarke International University Research Ethics Committee approved the study (CIU-REC 2021-69).

Results

Six of 33 files (18.2%) had MDR bacteria on their surfaces (Table 1). Contamination was significantly associated with the type of medical diagnosis (P = 0.014) and the file storage location (P=0.010). The MDR pathogens identified were Fastidious Acinetobacter (5/33; 15.2%) and methicillin-resistant Staphylococcus aureus (1/33; 3%).

Table 1. Participant characteristics stratified by the presence of multidrug-resistant bacteria on patient medical file surfaces

Note: Row percentages are presented as total in a row as a denominator.

Qualitative data revealed that HCPs were knowledgeable about IPC measures:

“We have to maintain a sterile ICU. Nurses should decontaminate the unit with JIK [sodium hypochlorite] solution plus soap. We also have to damp dust before every shift.” [Nurse In-Charge 1].

However, HCPs’ adherence to ICP measures was compromised by heavy workloads:

“The protocol for admitting patients to the intensive care and high dependence units says that the patient should have a chlorhexidine bath, but it is never done. Also, all invasive tubes should be removed at admission, but it is never done. Staff also rarely keep a log to ensure we change tubes every seven days” [Nurse In-Charge 2].

Training in IPC information, education, and communication (IEC) was identified as a strategy to prevent MDR on patient medical files:

“It is vital that IPC guidelines are known to all healthcare providers and taught to all new staff. The guidelines and posters should be available, and a procedure book should be in our vicinity. The entrance and noticeboards are good places to put the IPC guidelines” [Nurse In-Charge 5].

Discussion

Our study revealed that nearly one in five patient medical files in ICUs and HDUs were contaminated with MDR bacteria. Most contaminated files belonged to patients treated with aminoglycoside or glycopeptide-based regimens, aligning with findings from previous research.Reference Augustin, Kermarrec and Muller-Serieys7 Additionally, medical files for patients who underwent invasive procedures showed the highest surface contamination levels with MDR—consistent with an earlier study.Reference Chen, Chen and Wang8 The nature of invasive procedures for critically ill individuals—which demand frequent interaction from HCP both during and post-procedure—alongside the educational environment of teaching hospitals where trainees are present may explain the contamination observed on patients’ medical files. Although the surveyed HCPs were aware of IPC measures, adherence to them was lacking, primarily due to their heavy workloads. They proposed training sessions on IEC materials focused on IPC measures to improve compliance. Although our findings are preliminary and limited by small sample size, they indicate that adopting straightforward strategies such as monitoring and reviewing hand hygiene practices in ICUs and HDUs could improve adherence to IPC protocols.

Data availability statement

The data sets used and/or analyzed during the current study are available from the corresponding author upon reasonable request.

Acknowledgments

We acknowledge the contribution of the study participants, the Mulago National Referral Hospital administration for supporting the study, and the Clarke International University Institute of Public Health and Management for their support.

Author contributions

MK and SO conceptualized and designed the study. MK acquired the data. MK, JI, and SO analyzed and interpreted the data. JI and SO drafted the manuscript. JI, AM, and SO revised the manuscript for intellectual content. All authors (MK, JI, AM, and SO) read and approved the final manuscript.

Financial support

None.

Competing interests

The authors declare that they have no competing interests.

Ethical standard

This study was approved by the Clarke International University Research Ethics Committee (CIU-REC 2021-69) and received administrative clearance from Mulago National Referral Hospital. After thoroughly explaining the study’s purpose, benefits, and potential risks, all HCPs provided written informed consent before the key informant interviews.

Declarations

We declare that authors have no conflict of interest.

List of abbreviations

HDU: High Dependence Unit.

ICU: Intensive Care Unit.

IEC: Information, Education, and Communication.

IPC: Infection Prevention and Control

WHO: World Health Organization

Consent for publication

Not applicable

References

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Table 1. Participant characteristics stratified by the presence of multidrug-resistant bacteria on patient medical file surfaces