Hostname: page-component-cd9895bd7-gxg78 Total loading time: 0 Render date: 2024-12-25T06:49:14.418Z Has data issue: false hasContentIssue false

Analysis of linkage disequilibria between allozyme loci in natural populations of Drosophila melanogaster

Published online by Cambridge University Press:  14 April 2009

Charles H. Langley
Affiliation:
National Institutes of Health, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina
Diana B. Smith
Affiliation:
National Institutes of Health, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina
F. M. Johnson
Affiliation:
National Institutes of Health, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina
Rights & Permissions [Opens in a new window]

Summary

Core share and HTML view are not available for this content. However, as you have access to this content, a full PDF is available via the ‘Save PDF’ action button.

Linkage disequilibria between pairs of 8 polymorphic enzyme loci (αGpdh, Mdh, Adh, Est-6, Pgm, Odh, Est-C and Acph) in some 100 natural population samples of Drosophila melanogaster were examined. The estimates of linkage disequilibrium were made from zygotic frequencies. The magnitude of linkage disequilibria are small and similar to those in previous reports. Variation in linkage disequilibrium among related subpopulations was analysed by analysis of variance of the correlation coefficients. Despite the small absolute value of linkage disequilibrium there is a suggestion of a correlation among related subpopulations. The magnitude of linkage disequilibrium was observed to be positively correlated with linkage. Two cage populations were observed to demonstrate large amounts of linkage disequilibrium between closely linked loci in contrast to the situation in natural populations. This is attributable to the finite sizes of these cage populations.

Type
Research Article
Copyright
Copyright © Cambridge University Press 1978

References

REFERENCES

Charlesworth, B. & Charlesworth, D. (1973). A study of linkage disequilibrium in populations of Drosophila melanogaster. Genetics 73, 351359.CrossRefGoogle ScholarPubMed
Cockerham, C. C. & Weir, B. S. (1977). Digenic descent measures for finite populations. Genetical Research 30, 121147.CrossRefGoogle Scholar
Hill, W. G. (1974). Estimation of linkage disequilibrium in randomly mating populations. Heredity 33, 229239.CrossRefGoogle ScholarPubMed
Hill, W. G. & Robertson, A. (1968). Linkage disequilibrium in finite populations. Theoretical and Applied Genetics 38, 226231.CrossRefGoogle ScholarPubMed
Johnson, F. M. & Schaffer, H. E. (1973). Isozyme variability in species of the genus Drosophila. VII: Genotype – environment relationships in populations of Drosophila melanogaster from the Eastern United States. Biochemical Genetics 10, 149163.CrossRefGoogle ScholarPubMed
Kojima, K., Gillespie, J. H. & Tobari, Y. N. (1970). A profile of Drosophila species' enzymes assayed by electrophoresis. I. Number of alleles, heterozygorites and linkage disequilibrium in glucose-metabolizing systems and some other enzymes. Biochemical Genetics 4, 627637.CrossRefGoogle ScholarPubMed
Koziol, J. A. & Perlman, M. D. (1978). Combining independent χ2-tests. Journal of the American Statistical Association. (In the Press.)CrossRefGoogle Scholar
Langley, C. H. (1977). Nonrandom associations between allozymes in natural populations of Drosophila melanogaster. In Lecture Notes in Biomathematics. 19. Measuring Selection in Natural Populations ed. Christiansen, F. B. and Fenchel, T. M.). New York: Springer-Verlag.Google Scholar
Langley, C. H., Ito, K. & Voelker, R. A. (1977). Linkage disequilibrium in natural populations of Drosophila melanogaster. Seasonal variation. Genetics 86, 447454.CrossRefGoogle ScholarPubMed
Langley, C. H., Tobari, Y. N. & Kojima, K. (1979). Linkage disequilibrium in natural populations of Drosophila melanogaster. Genetics 78, 921936.CrossRefGoogle Scholar
Mukai, T., Mettler, L. E. & Chigusa, S. I. (1971). Linkage disequilibria in a local population of Drosophila melanogaster. Proceedings of the National Academy of Sciences, U.S.A. 68, 10651069.CrossRefGoogle Scholar
Mukai, T., Watanabe, T. K. & Yamaguchi, O. (1974). The genetic structure of natural populations of Drosophila melanogaster XII. Linkage disequilibrium in a large local population. Genetics 77, 771793.CrossRefGoogle Scholar
Mukai, T. & Voelker, R. A. (1977). The genetic structure of natural populations of Drosophila melanogaster. XIII. Further studies on linkage disequilibrium. Genetics 86, 175185.CrossRefGoogle ScholarPubMed
O'Brien, S. J. & McIntyre, R. J. (1976). Interacting gene-enzyme systems in Drosophila. Anntial Review of Genectics 10, 281318.Google Scholar
Smith, D. B., Langley, C. H. & Johnson, F. M. (1978). Variance component analysis of allozyme frequency data from eastern populations of Drosophila melanogaster. Genetics 88, 121137.CrossRefGoogle ScholarPubMed
Voelker, R. A., Mukai, T. & Johnson, F. M. (1977). Genetic variation in populations of Drosophila melanogaster from the Western United States. Genetica. 47, 143148.CrossRefGoogle Scholar
Voelker, R. A., Cockerham, C. C.Johnson, F. M., Schaeffer, H. E., Mukai, T. & Mettler, L. E. (1978). Inversions fail to account for allozyme clines. Genetics 88, 515527.CrossRefGoogle ScholarPubMed
Weir, B. S. & Cockerham, C. C. (1974). Behavior of pairs of loci in finite monoecious populations. Theoretical Population Biology 6, 323354.CrossRefGoogle ScholarPubMed