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Regional population differences of the brown planthopper (Nilaparvata lugens Stål) in Cambodia using genotyping-by-sequencing

Published online by Cambridge University Press:  24 October 2017

M. Matsukawa ,
Mikako Tasaki ,
Kazuyuki Doi ,
Kasumi Ito ,
Kazuhito Kawakita  and
Toshiharu Tanaka
M. Matsukawa*
Affiliation:
Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi 464-8601, Japan Japan International Research Center for Agricultural Sciences, Ohwashi, Tsukuba, Ibaraki 305-8686, Japan
Mikako Tasaki
Affiliation:
International Cooperation Center for Agricultural Education, Nagoya University, Chikusa, Nagoya, Aichi 464-8601, Japan
Kazuyuki Doi
Affiliation:
Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi 464-8601, Japan
Kasumi Ito
Affiliation:
International Cooperation Center for Agricultural Education, Nagoya University, Chikusa, Nagoya, Aichi 464-8601, Japan
Kazuhito Kawakita
Affiliation:
Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya, Aichi 464-8601, Japan
Toshiharu Tanaka
Affiliation:
International Cooperation Center for Agricultural Education, Nagoya University, Chikusa, Nagoya, Aichi 464-8601, Japan
*
*Author for correspondence Phone/ Fax: +029-838-6622 E-mail: [email protected]
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Abstract

The brown planthopper Nilaparvata lugens Stål (BPH) can be found year-round in tropical region and causes severe damage to rice. Although there has been documented BPH damage to rice crops in the past decade in Cambodia, the extent of this epidemic is poorly understood. Here, we examined the time variation of BPH population in the abundance of morphotypes in 13 main rice-producing provinces (86 sites) by aspirator method and in the Takeo Province (five sites) by yellow sticky trap method. At least three generations were observed during the 3-month collection period in the rainy growing season. Regarding the occurrence of BPH morphotypes, in July the macropterous adults were restricted to south Cambodia and in August all morphotypes, adults (macropterous and brachypterous) and nymphs, appeared in all sampling sites. To explain the difference of regional distribution, the genetic differentiation was analyzed in south and northwest Cambodia (three sites) by using single nucleotide polymorphisms (SNP) analysis via genotyping-by-sequencing (GBS) using next-generation sequencing. The 2455 SNPs obtained by GBS clarified the three sub-populations and they corresponded to the expected dissemination patterns. These results provide a clue to understand the differentiation and epidemic of BPH in Cambodia.

Keywords

regular interval samplingSNPnext-generation sequencingdistribution
Type
Research Papers
Information
Bulletin of Entomological Research , Volume 108 , Issue 4 , August 2018 , pp. 471 - 478
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Copyright
Copyright © Cambridge University Press 2017 

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