An extremely dynamic chain of archipelagos links South America and the Antarctic Peninsula. It includes islands, which are large and small, old and young, near continental margins and isolated, and well sampled and poorly known. The current study sampled the macrobenthos of all the major archipelagos of this arc at shelf and slope depths using an Agassiz trawl. At least four samples (200 m, 500 m, 1000 m and 1500 m) were taken down-slope at Falkland Trough, Shag Rocks, South Georgia, South Thule, Powell Basin, Elephant Island, and Livingston Island sites and one sample was collected in the caldera of Deception Island. Despite the biogeographical and biodiversity importance of this region, this is the first time (by definition) entire standardized trawl samples have been analysed from all its archipelagos and at any consistent taxonomic level. We found 15 phyla and 29 classes of macro- and megafauna in total across the samples, many of which occurred at all sites. Even at remote and geologically young sites richness was high. Richness increased with abundance and wet mass and was highest in the shallow shelf samples and lowest at 1500 m. Abundance and wet mass varied more than two orders of magnitude, even within classes or study areas. There were strong similarities between the ascidian dominated shallow faunas of the two active volcanic sites, Southern Thule and Deception Island despite huge differences in isolation. There were also strong faunal similarities between Falkland Trough and Shag Rocks despite being on opposing sides of the Polar Front. In contrast two near neighbours with similarly soft substrata, Elephant and Livingston islands were amongst the most dissimilar.

The Scotia Arc, linking the Magellan region with the Antarctic Peninsula, comprises young and old islands both near continents and isolated, and is the only semi-continuous link between cool temperate and Antarctic environments. It is an ideal region for studies on how marine biodiversity changes across an extended transition zone. Echinoids (sea urchins) and their associated epibionts were found across depths from 91–1045 m, with 19 species from shelf and four from slope depths. The 23 species from 38 trawls represent 31% of all echinoid species known from the Southern Ocean and 38% of the shelf/upper slope echinoids. The specimens collected comprise representatives of the five families Cidaridae, Echinidae, Temnopleuridae, Schizasteridae and Pourtalesiidae. Echinoids are probably a good model for how well we know Antarctic shelf and slope megabenthos; none of the species we report are new to science but we found nine (39%) of our study species present at new localities, some thousands of kilometres from previous findings. New biogeographic ranges are illustrated for Ctenocidaris gigantea, C. nutrix, C. spinosa, Abatus curvidens, A. ingens, A. shackletoni, Amphineustes rostratus, Tripylaster philippi and Pourtalesia aurorae. Southern Ocean echinoids show eurybathy as the mean depth range of our study species was 1241 m and only one was at less than 500 m. The current view of echinoid dominance of super-abundance in the shallows seems to be not transferable to shelf and slope depths as only one of 38 trawls was dominated by echinoids. Current knowledge on maximum sizes in Antarctic echinoids seems to be good as our morphometric measurements were mainly within known size ranges. Regular echinoids increased predictably in mass with increasing test length, apart from Ctenocidaris spinosa. Tissue mass of cidaroid species was ~17%, but across irregular species varied from 17.7–8.9%. No epibionts were found on irregular echinoids or Echinidae but 70 cidaroids examined carried 51 species representing ten classes. Many of these species are reported as cidaroid epibionts for the first time. Cidaroids and their epibionts constituted > 38% of the total macrofaunal richness in the trawls they were present in. Echinoids and their epibionts clearly contribute significantly to Southern Ocean biodiversity but are minor components of biomass except in the shallows.

Recent trawling in the Southern Ocean has yielded individuals of a number of species of the deep sea octopod genus Thaumeledone. This paper provides the first molecular study of the genus, employing molecular sequences from five mitochondrial (12S rDNA, 16S rDNA, COI, COIII, cytochrome oxidase b) and a single nuclear gene (rhodopsin) and includes representatives of each of the known Southern Ocean species. Thaumeledone rotunda, believed to be circumpolar in distribution and found in relatively deep water is the sister taxa to T. gunteri, known only from South Georgia. A notable level of sequence variability was evident between a T. peninsulae individual recently captured from the Powell Basin, and two T. peninsulae individuals captured from the continental slope, north of the South Shetland Islands. This is likely to represent population level intraspecific variation within this species.

We analysed cytochrome oxidase I (COI) barcodes for 35 putative fish species collected in the Scotia Sea, and compared the resultant molecular data with field-based morphological identifications, and additional sequence data obtained from GenBank and the Barcode of Life Data System (BOLD). There was high congruence between morphological and molecular classification, and COI provided effective species-level discrimination for nearly all putative species. No effect of geographic sampling was observed for COI sequence variation. For two families, including the Liparidae and Zoarcidae, for which morphological field identification was unable to resolve taxonomy, DNA barcoding revealed significant species-level divergence. However, the dataset lacked sufficient sensitivity for resolving species within the Bathydraco and Artedidraco genera. Analysis of cytochrome b for these two genera also failed to resolve taxonomic identity. The data are discussed in relation to emergent priorities for additional taxonomic studies. We emphasize the utility of DNA barcoding in providing a valuable taxonomic framework for fundamental population studies through assigning life history stages or other morphologically ambiguous samples to parental species.

Shelf and slope cryptofauna were sampled at the most northerly shelf environments within the Southern Ocean, Shag Rocks. The area is remarkably rich, with seven phyla, 10 classes, 40 families and 81 species on 0.36 m2 of shelf boulders. A large proportion of genera and species found had not been seen there before, some were new to science and species accumulation curves did not approach an asymptote. Current estimates of benthic diversity are clearly still too low if even well studied locations and depths reveal so much novelty with such little sample effort. Proportions of new species were higher in slope samples showing how little we know of this important depth. Significantly, life was just as rich and, surprisingly, abundant on boulders from continental slope depths. Clearly there are places where the continental slope around Antarctica harbours a wealth of species with potential to resupply the shelf if life was ‘bulldozed’ off it by past ice shelf expansions during glacial maxima. Some species on boulders from 1500 m also occur as shallow as the Antarctic intertidal zone. That this rich fauna was ‘Antarctic’ in character shows the extremes, e.g. sea temperature (> 4°C in summer), that they can adapt to given long enough time periods.

Studies of the recovery of the fauna following the 1967–70 eruptions at Deception Island, South Shetland Islands, have made it one of the best-studied marine sites of the Southern Ocean for biodiversity. Using SCUBA we surveyed the mega- and macro-epifauna of its subtidal zones in the entrance (Neptune's Bellows), immediately inside the caldera (Whaler's Bay) and well within the caldera (Fumarole Bay). Richness declined from 10 phyla, 13 classes and 35 species at Neptune's Bellows to three phyla, four classes and five species in Whaler's Bay and just two phyla, classes and species at Fumarole Bay. Amongst the 35 species we found at Neptune's Bellows, 14 were previously unrecorded from Deception Island. Despite many ship visits and amongst the warmest sea temperatures in the Southern Ocean, the Non Indigenous Species (NIS) algae were not found in our survey. Deception Island has been recolonized considerably since the recent eruptions, but many taxa are still very poorly represented and the colonizers present are mainly those with planktotrophic larvae. Examination of the literature revealed that to date 163 named marine species have been found within the caldera as well as at least 50 more morphospecies, which are yet to be identified. Species accumulation has consistently increased across eight recent samples reported and the number of species reported there is likely to reach 300 when taxa such as the nematodes are identified to species level. This represents a first meaningful total species estimate for an Antarctic marine area and, as the site is comparatively impoverished, indicates how rich the surrounding Antarctic shelf must be.

The remote South Sandwich arc is an archipelago of small volcanic islands and seamounts entirely surrounded by deep water and about 600 km away from the closest island, South Georgia. As some of the youngest islands (< 5 m.y.) in the Southern Ocean they are ideal for studying colonization processes of the seabed by benthic fauna, but are rarely investigated because of remoteness and extreme weather. The current study attempted to quantify the richness and abundance of the epibenthic macrofauna around the Southern Thule group by taking five epibenthic sledge samples along a depth transect including three shelf (one at 300 m and two at 500 m) and two slope stations (1000 and 1500 m). Our aim was to investigate higher taxon richness and community composition in an isolated Antarctic locality, since recent volcanic eruptions between 1964 and 1997. We examined patterns across all epibenthic macrofauna at phylum and class levels, and investigated trends in some model groups of crustaceans to order and family level. We found that abundance was highest in the shallowest sample and decreased with depth. Shelf samples (300 and 500 m) were dominated by molluscs and malacostracans while at the deeper stations (1000 and 1500 m) nematodes were the most abundant taxon. Surprisingly, the shallow shelf was dominated by animals with restricted dispersal abilities, such as direct developing brooders (malacostracans) or those with lecithotrophic larvae (bivalves of the genus Yoldiella, most bryozoan species). Despite Southern Thule's geological youth, recent eruptions, and its remoteness the shallow shelf was rich in higher taxa (phyla/classes) as well as orders and families of our model groups. Future work at higher taxonomic resolution (species level) should greatly increase understanding of how life has reached and established on these young and highly disturbed seabeds.

Seven independent clone libraries were constructed to study the biodiversity of the bacterioplankton in the surface waters around Southern Thule, South Sandwich Islands, in order to identify the species present, to determine the sample effort required to estimate the total diversity, and to determine whether the surface waters around Southern Thule represented a highly specialized local anomaly or a subset of the marine meta-community. In total, 672 clones generated 629 useable sequences. These 629 clones matched 278 different sequences deposited in the 16S rDNA sequence databases. The majority of the clones were related to marine microorganisms, many of which had been previously detected in permanently cold Arctic and Antarctic marine environments. Each clone library generated an average of 35.8 new sequence matches. 346 clones covered two-thirds of the total estimated diversity, while 438 clones covered three-quarters of the total estimated diversity. Above this number, the coverage tended to stabilize and a relatively large number of additional clones were required to improve coverage significantly, increasing at the rate of about one new sequence match per 100 new clones. Comparing the different clone libraries, eight matches occurred in each of the seven libraries, whilst fifty-five occurred in only one, suggesting that there might be a relatively small number of common dominant ubiquitous species, with a much larger underlying diversity or ‘seed bank’ from which this dominant diversity is drawn. This study suggests that the dominant bacterioplankton in the surface waters around Southern Thule represent a subset of the marine meta-community, whilst sub-dominant diversity appears to be a highly specialized local anomaly.

This paper provides new observations of volcanic features and hydrological characteristics in and around Southern Thule, the southernmost group of islands in the South Sandwich Islands, including the first high-resolution bathymetric image of the Douglas Strait caldera. The South Sandwich Islands are the summits of several very large subduction-related volcanoes constructed at the eastern boundary of the Scotia Sea. Observations of the islands are scarce owing to their remote location and they are only rarely visited, yet the area is an active volcanic arc that is rapidly changing as a result of eruptions, including one (on Montagu Island) that has been ongoing for six years and is creating new land. The three islands that make up Southern Thule are morphologically different, and they illustrate different stages in the construction and evolution of islands in the South Sandwich group. We present the results of an acoustic and hydrographic survey that resulted in the first high-resolution, multibeam ‘swath’ image of the submarine Douglas Strait caldera. The results confirm the presence of a large sediment mound (c. 1000 m3 in volume) on the floor of the Douglas Strait caldera related to a flank collapse of Thule Island. The image also shows an extensive arcuate fault structure, interpreted as evidence that the caldera is nested, and its geomorphological freshness suggests that it is a very young feature that formed conceivably in the last few decades or centuries. The bathymetric image also reveals at least three cone- or mound-like structures within the caldera that may relate to renewed post-caldera volcanism (as pyroclastic cones and/or pillow mounds). Recently formed cones and faults associated with caldera rims are often associated with hydrothermal activity. However, temperature and salinity data collected within the caldera do not yet show any evidence of hydrothermal venting. The ocean surrounding Southern Thule has a prominent surface layer of low salinity water that is probably caused by a high meltwater flux derived from ice caps on the islands. This flux may have been enhanced by the recent warming trend observed in the Antarctic Peninsula, although volcano-related geothermal melting in the ice-filled Thule Island caldera may also contribute to the meltwater flux.