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2 - Archaeogenetics

Published online by Cambridge University Press:  05 May 2015

Graeme Barker
Affiliation:
University of Cambridge
Candice Goucher
Affiliation:
Washington State University
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Summary

Archaeogenetics was developing its own approaches to data handling, hybridizing techniques borrowed from a variety of disparate disciplines. The mtDNA and the male-specific part of the Y chromosome are the two uniparental, non-recombining genetic marker systems, which led the way for genealogical and phylogeographic studies. Phylogeography utilizes three variables, the reconstructed phylogenetic tree of descent, or genealogy, the geographic distribution of the lineages and the time depth of various clusters. Founder analysis is an attempt to formalize a phylogeographic approach to identifying colonization events, but it exemplifies the approach more broadly. The analysis of ancient DNA has the potential to test models built on the basis of modern variation and archaeology. Ancient DNA is starting to contribute to the study of other aspects of the spread of farming.
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Publisher: Cambridge University Press
Print publication year: 2015

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References

Further reading

Ammerman, A.J. and Cavalli-Sforza, L.L.. The Neolithic Transition and the Genetics of Populations in Europe. Princeton University Press, 1984.CrossRefGoogle Scholar
Avise, J.C. Phylogeography. Cambridge, MA: Harvard University Press, 2000.CrossRefGoogle ScholarPubMed
Bellwood, P. and Renfrew, C. (eds.). Examining the Farming/Language Dispersal Hypothesis. Cambridge: McDonald Institute for Archaeological Research, 2002.Google Scholar
Bramanti, B., Thomas, M.G., Haak, W., et al. ‘Genetic discontinuity between local hunter-gatherers and central Europe’s first farmers.Science, 326 (2009), 137–40.CrossRefGoogle ScholarPubMed
Brandt, G., Haak, W., Adler, C.J., et al. ‘Ancient DNA reveals key stages in the formation of central European mitochondrial genetic diversity.Science, 342 (2013), 257–61.CrossRefGoogle ScholarPubMed
Brotherton, P., Haak, W., Templeton, J., et al. ‘Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans.Nature Communications, 4 (2013), 1764.CrossRefGoogle ScholarPubMed
Busby, G.B., Brisighelli, F., Sánchez-Diz, P., et al. ‘The peopling of Europe and the cautionary tale of Y chromosome lineage R-M269.Proceedings of the Royal Society B, 279 (2011), 884–92.Google ScholarPubMed
Cavalli-Sforza, L.L., Menozzi, P., and Piazza, A.. The History and Geography of Human Genes. Princeton University Press, 1994.Google Scholar
Deguilloux, M.F., Leahy, R., Pemonge, M.H., and Rottiér, S.. ‘European Neolithization and ancient DNA: an assessment.Evolutionary Anthropology, 21 (2012), 2437.CrossRefGoogle ScholarPubMed
Gamble, C., Davies, W., Pettitt, P., Hazelwood, L., and Richards, M.. ‘The archaeological and genetic foundations of the European population during the late Glacial: implications for “agricultural thinking”.Cambridge Archaeological Journal, 15 (2005), 193223.CrossRefGoogle Scholar
Haak, W., Forster, P., Bramanti, B., et al. ‘Ancient DNA from the first European farmers in 7500-year-old Neolithic sites.Science, 310 (2005), 1016–18.CrossRefGoogle ScholarPubMed
Itan, Y., Powell, A., Beaumont, M.A., Burger, J., and Thomas, M.G.. ‘The origins of lactase persistence in Europe.PLoS Computational Biology, 5 (2009), e1000491.CrossRefGoogle ScholarPubMed
King, R. and Underhill, P.. ‘Congruent distribution of Neolithic painted pottery and ceramic figurines with Y-chromosome lineages.Antiquity, 76 (2002), 707–14.CrossRefGoogle Scholar
Lacan, M., Keyser, C., Ricaut, F.X., et al. ‘Ancient DNA suggests the leading role played by men in the Neolithic dissemination.Proceedings of the National Academy of Sciences, 108 (2011), 18255–9.CrossRefGoogle ScholarPubMed
Larson, G., Albarella, U., Dobney, K., et al. ‘Ancient DNA, pig domestication, and the spread of the Neolithic into Europe.Proceedings of the National Academy of Sciences, 104 (2007), 15276–81.CrossRefGoogle ScholarPubMed
Macaulay, V. and Richards, M.. ‘Mitochondrial genome sequences and phylogeographic interpretation.’ In Encyclopedia of Life Sciences, www.els.net. Chichester: Wiley. doi: 10.1002/9780470015902.20843.pub2. 2013.Google Scholar
Malmström, H., Gilbert, M.T.P., Thomas, M.G., et al. ‘Ancient DNA reveals lack of continuity between Neolithic hunter-gatherers and contemporary Scandinavians.Current Biology, 19 (2009), 1758–62.CrossRefGoogle ScholarPubMed
Nielsen, R. and Beaumont, M.A.. ‘Statistical inferences in phylogeography.Molecular Ecology, 18 (2009), 1034–47.CrossRefGoogle ScholarPubMed
Pala, M., Chaubey, G., Soares, P., and Richards, M.B.. ‘The archaeogenetics of European ancestry.’ In Encyclopedia of Life Sciences, www.els.net. Chichester: Wiley. doi:10.1002/9780470015902.a0024624. 2014.Google Scholar
Pala, M., Olivieri, A., Achilli, A., et al. ‘Mitochondrial DNA signals of late Glacial re-colonization of Europe from Near Eastern refugia.American Journal of Human Genetics, 90 (2012), 915–24.CrossRefGoogle Scholar
Renfrew, C. and Boyle, K. (eds.). Archaeogenetics. Cambridge: McDonald Institute for Archaeological Research, 2000.Google Scholar
Richards, M.The Neolithic invasion of Europe.Annual Review of Anthropology, 62 (2003), 135–62.Google Scholar
Richards, M., Macaulay, V., Hickey, E., et al. ‘Tracing European founder lineages in the Near Eastern mtDNA pool.American Journal of Human Genetics, 67 (2000), 1251–76.CrossRefGoogle ScholarPubMed
Salas, A., Richards, M., De la Fe, T., et al. ‘The making of the African mtDNA landscape.American Journal of Human Genetics, 71 (2002), 1082–111.CrossRefGoogle ScholarPubMed
Semino, O., Passarino, G., Oefner, P.J., et al. ‘The genetic legacy of Paleolithic Homo sapiens sapiens in extant Europeans: a Y chromosome perspective.Science, 290 (2000), 1155–9.CrossRefGoogle ScholarPubMed
Skoglund, P., Malmström, H., Raghavan, M., et al. ‘Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe.Science, 336 (2012), 466–9.CrossRefGoogle ScholarPubMed
Soares, P., Achilli, A., Semino, O., et al. ‘The archaeogenetics of Europe.Current Biology, 20 (2010), R174–83.CrossRefGoogle ScholarPubMed
Soares, P., Ermini, L., Thomson, N., et al. ‘Correcting for purifying selection: an improved human mitochondrial molecular clock.American Journal of Human Genetics, 84 (2009), 740–59.CrossRefGoogle ScholarPubMed
Soares, P., Rito, T., Trejaut, J., et al. ‘Ancient voyaging and Polynesian origins.American Journal of Human Genetics, 88 (2011), 239–47.CrossRefGoogle ScholarPubMed
Troy, C.S., MacHugh, D.E., Bailey, J.F., et al. ‘Genetic evidence for Near-Eastern origins of European cattle.Nature, 410 (2001), 1088–91.CrossRefGoogle ScholarPubMed

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