Parasite community structure is governed by functional traits of hosts and parasites. Notably, parasite populations and communities respond to host social and spatial behaviour. Many studies demonstrating these effects dealt with small-bodied host species, while the influence of host social patterns on parasite communities in large hosts remains understudied. In an earlier study on nyalas (Tragelaphus angasii), host age was more important than sex in structuring helminth communities and networks, but the influence of both was mediated by local environmental conditions, creating different locality patterns. Common reedbuck (Redunca arundinum) differ from nyalas in spatial and social behaviour. Based on helminth and ectoparasite data from 56 reedbuck examined at 2 localities in KwaZulu-Natal Province, we asked which patterns are similar and which differ between the 2 host species. Similar to nyalas, reedbuck age was more important than sex in structuring communities and networks. However, local environmental conditions exerted the strongest influence on transmission patterns, especially in ectoparasites. Complex interactions between reedbuck traits, parasite traits and local environmental conditions modulated the risk of infection differently at the 2 sites, confirming our earlier findings in nyalas that pooling data from different locations may obscure location-specific parasite community patterns. Similarities between patterns in reedbuck and nyalas, despite their behavioural differences, suggest some common patterns in parasite community ecology that, in turn, are determined mostly by parasite traits and population dynamics.

Few studies have investigated the ecological interactions between wild species of Suidae and their parasites, leaving our knowledge concerning this host–parasite system fragmented. In the present study, we applied network studies to analyse community nestedness in helminth assemblages of common warthogs, Phacochoerus africanus (Gmelin) (Suidae). Helminth data were compiled from 95 warthogs, including young and adult males and females, from 2 different conservation areas in Mpumalanga and Limpopo Provinces, South Africa, collected monthly over a period of 1 year each. The aim was to study the effect of host sex, age and season of sampling on the structure of helminth infracommunities harboured by the warthogs and to search for non-random structural patterns in the warthog–helminth interaction networks. Furthermore, we investigated the influence of a warthog's age, sex and season of sampling on beta diversity and dark diversity of their helminth infracommunities. Lastly, we asked whether the effects of host sex, age and sampling season on helminth communities differed between the 2 localities. We found that helminth communities of warthogs were nested and host–parasite interactions were influenced by all 3 factors as well as combinations thereof. However, the resulting patterns differed at the 2 localities, indicating that local environmental processes are important drivers of community structure.

In recent years, treating host–parasite associations as bipartite interaction networks has proven a powerful tool to identify structural patterns and their likely causes in communities of fish and their parasites. Network analysis allows for both community-level properties to be computed and investigated, and species-level roles to be determined. Here, using data from 31 host–parasite interaction networks from local fish communities around the world, we test for latitudinal trends at whole-network level, and taxonomic patterns at individual parasite species level. We found that while controlling for network size (number of species per network), network modularity, or the tendency for the network to be subdivided into groups of species that interact mostly with each other, decreased with increasing latitude. This suggests that tropical fish–parasite networks may be more stable than those from temperate regions in the event of community perturbations, such as species extinction. At the species level, after accounting for the effect of host specificity, we observed no difference in the centrality of parasite species within networks between parasites with different transmission modes. However, species in some taxa, namely branchiurans, acanthocephalans and larval trematodes, generally had higher centrality values than other parasite taxa. Because species with a central position often serve as module connectors, these 3 taxa may play a key role in whole-network cohesion. Our results highlight the usefulness of network analysis to reveal the aspects of fish–parasite community interactions that would otherwise remain hidden and advance our understanding of their evolution.

The present study is the first attempt to describe beta-diversity patterns in polychaetes of the Caribbean Sea, analysing depth changes in species composition of the Eunicida and Amphinomida inhabiting dead coral in Chinchorro Bank, southern Mexican Caribbean. In April 2008, dead coral fragments were collected by scuba diving in eight stations along two bathymetric gradients (4–9 m and 7–16.2 m depth); 755 individuals from 53 species of the families Amphinomidae, Dorvilleidae, Eunicidae, Lumbrineridae, Oenonidae and Onuphidae were identified. The highest number of species (32) and individuals (514) were found in the family Eunicidae. The Northern transect harboured 36 species, on average 18.75 ind. L−1, which decreased linearly with depth; the Central transect had 43 species, on average 19.01 ind. L−1, which increased at middle depths. The species inhabiting both these zones were moderately different (βsor = 0.603): 49.06% of the fauna occurred on both transects, but the components of beta-diversity, turnover and nestedness, displayed distinct patterns: in the Northern one replacement was the dominant factor (βsim = 0.3–1; βnes = 0–0.091), practically representing all faunal differences (βsor = 0.391–1); in the Central, dissimilarity due to nestedness increased (βnes = 0.031–0.829), mainly at the shallowest stations, but from 5 m depth, beta-diversity was almost completely explained by species replacement (βsim = 0.417–0.5; βnes = 0.031–0.318). Faunal differences were mostly related to higher abundances of Lysidice caribensis, Eunice goodei and Lumbrineris floridana in the Northern zone, and Lumbrineris perkinsi, Nicidion obtusa, Lysidice caribensis, Lumbrineris floridana, Lysidice unicornis and Eunice mutilata in the Central zone.

Studies integrating variation in species composition among sites are useful in understanding the impacts of land-use changes on the spatial distribution of biodiversity. However, the failure to recognize the distinction between beta diversity components, dissimilarity due to species replacement (i.e. turnover) and dissimilarity due to species loss from site to site (i.e. nestedness), can lead to inappropriate use of some indices. Here, we evaluated how the spatial distribution of anuran beta diversity components, turnover and nestedness, is associated with local and landscape descriptors in a tropical agricultural landscape with a recent history of agriculture expansion in south-eastern Brazil. Overall, 27 anuran species were found in the region with average ± SD species richness in each pool of 9.5 ± 3.5 species, ranging from 4 to 15 species. We observed that species turnover was the major component for anuran dissimilarity among pools, indicating that anuran species occurring in species-poor pools are not subsets of anuran species occurring in species-rich pools. Local variables and geographic distance were not important descriptors explaining the variation of anuran beta diversity. In contrast, the distance of the pools to the nearest forest fragment explained 16% of the variance in total beta diversity, 5% of the nestedness component and 2% of spatial turnover. Our results show that pools distributed across farmland landscapes are harbouring different anuran species composition, and together, these pools are contributing to the regional diversity of anurans in this region which is considered one of the most deforested and fragmented within Brazil.

Understanding the mechanisms underpinning spatiotemporal diversity patterns of biological communities is a major goal of ecology. We aimed to test two ecological hypotheses: (i) temporal patterns of β-diversity will mostly be driven by nestedness, with a loss of species from summer to winter, and (ii) nestedness values will correlate with climatic variables instead of turnover values, indicating either a loss of species during winter or a gain of species during summer. We sampled dung beetles using standardized sampling protocols along a year in four Atlantic forest sites: two at the northwest and two at the central region of Rio Grande do Sul state, southern Brazil. We partitioned temporal patterns of β-diversity into turnover and nestedness in order to investigate if community changes are driven by species substitution or gain/loss across time. Our results highlighted five main findings: (i) dung beetle composition varied more with sites than site geographic position; (ii) there was almost one and a half ‘true’ dung beetle assemblages regarding the spatial distribution of species weighed by abundance; (iii) we found a positive influence of mean temperature and a negative influence of relative humidity on both species richness and abundance; (iv) both spatial and temporal dissimilarity among sites were dominated by species replacement, while the relative importance of nestedness was higher in temporal than spatial patterns; (v) there was an effect of precipitation and relative humidity on temporal patterns of β-diversity components, but these effects were site-dependent. Contrary to our expectations, the β-diversity component of turnover dominated both spatial and temporal patterns in dung beetle dissimilarity among sites and months. Distinct climatic variables affected differently the α-diversity and β-diversity components of dung beetle assemblages. Partitioning β-diversity into temporal components is a promising approach to unveil patterns of the community dynamics and to produce insights on mechanisms underlying such patterns.

We studied nestedness and its relationships with beta-diversity in flea communities harboured by three closely related rodent species (Rhabdomys pumilio, Rhabdomys intermedius, Rhabdomys dilectus) at two spatial scales (within and among host populations) in South Africa and asked (a) whether variation in species composition of flea communities within and among host populations follows a non-random pattern; if yes, (b) what are the contributions of nestedness and species turnover to dissimilarity (= beta-diversity) among flea communities at the two scales; and (c) do the degree of nestedness and its contribution to beta-diversity differ among host species (social vs solitary) and between scales. We found that nestedness in flea assemblages was more pronounced (a) in social than solitary host species and (b) at lower (among host individuals within populations) than at higher scale (among host populations). We also found that higher degree of nestedness was associated with its higher contribution to beta-diversity. Our findings support earlier ideas that parasite community structure results from the processes of parasite accumulation by hosts rather than from the processes acting within parasite communities.

The study of altitudinal gradients has made enduring contributions to the theoretical and empirical bases of modern biology. Unfortunately, the persistence of these systems and the species that compose them is threatened by land-use change at lower altitudes and by climate change throughout the gradients, but especially at higher altitudes. In this review, we focus on two broad themes that are inspired by altitudinal variation in tropical montane regions: (1) dimensions of biodiversity and (2) metacommunity structure. Species richness generally decreased with increasing altitude, although not always in a linear fashion. Mid-altitudinal peaks in richness were less common than monotonic declines, and altitudinal increases in richness were restricted to amphibian faunas. Moreover, gradients of biodiversity differed among dimensions (taxonomic, phylogenetic and functional) as well as among faunas (bats, rodents, birds) in the tropical Andes, suggesting that species richness is not a good surrogate for dimensions that reflect differences in the function or evolutionary history of species. Tropical montane metacommunities evinced a variety of structures, including nested (bats), Clementsian (rodents, bats, gastropods), quasi-Clementsian (reptiles, amphibians, passerines) and quasi-Gleasonian (gastropods) patterns. Nonetheless, compositional changes were always associated with the ecotones between rain forest and cloud forest, regardless of fauna.

We describe the diversity and structure of a host–parasite network of 11 anuran species and their helminth parasites in the Pantanal wetland, Brazil. Specifically, we investigate how the heterogeneous use of space by hosts changes parasite community diversity, and how the local pool of parasites exploits sympatric host species of different habits. We examined 229 anuran specimens, interacting with 32 helminth parasite taxa. Mixed effect models indicated the influence of anuran body size, but not habit, as a determinant of parasite species richness. Variation in parasite taxonomic diversity, however, was not significantly correlated with host size or habit. Parasite community composition was not correlated with host phylogeny, indicating no strong effect of the evolutionary relationships among anurans on the similarities in their parasite communities. Host–parasite network showed a nested and non-modular pattern of interaction, which is probably a result of the low host specificity observed for most helminths in this study. Overall, we found host body size was important in determining parasite community richness, whereas low parasite specificity was important to network structure.

Hosts and parasites interact with each other in a variety of ways, and this diversity of interactions is reflected in the networks they form. To test for differences in interaction patterns of ecto- and endoparasites we analysed subnetworks formed by each kind of parasites and their host fish species in fish–parasite networks for 22 localities. We assessed the proportion of parasite species per host species, the relationship between parasite fauna composition and host taxonomy, connectance, nestedness and modularity of each subnetwork (n = 44). Furthermore, we evaluated the similarity in host species composition among modules in ecto- and endoparasite subnetworks. We found several differences between subnetworks of fish ecto- and endoparasites. The association with a higher number of host species observed among endoparasites resulted in higher connectance and nestedness, and lower values of modularity in their subnetworks than in those of ectoparasites. Taxonomically related host species tended to share ecto- or endoparasites with the same interaction intensity, but the species composition of hosts tended to differ between modules formed by ecto- and endoparasites. Our results suggest that different evolutionary and ecological processes are responsible for organizing the networks formed by ecto- and endoparasites and fish.

Several studies have shown that qualitative (binary) ant-plant networks are highly nested in tropical environments, in which specialist species (with fewer interactions) are connected with generalists (with the most interactions) in cohesive subgroups. Interactions occur in both qualitative and quantitative networks, however, how their frequency may structure the nestedness in ecological networks involving these organisms is, we believe, unknown. Based on this perspective, we used nestedness analysis to address the effect of interaction frequency on ant-plant networks (n = 14 networks). Unlike binary networks, quantitative networks are often significantly non-nested. In addition, species with a higher interaction frequency have a higher number of links, indicating that these species are possibly more abundant and/or competitive. Moreover, different biological parameters can change the nature of ant-plant interactions, as a plant can be a good resource for one ant and a ‘bad’ resource for another. Thus, this suggests a new perspective for the study of interaction networks in the tropics, since species with lower interaction frequency are not necessarily subsets of species with higher frequency, and consequently generate the non-nested pattern in quantitative networks.

Lichens are a fascinating example of a symbiotic mutualism. It is still uncertain which processes guide fungal-photobiont interactions, and whether they are random or of a more complex nature. Here, the fungal-algal interactions in Ramalina menziesii and co-occurring taxa are analyzed by using DNA sequences of the algal Internal Transcribed Spacer region (ITS), to investigate fungal-algal associations in juvenile R. menziesii and allied species. Algal species were identified by a combination of BLAST searches, median-joining network analysis, and Bayesian phylogenetics. Fungal-algal networks were analyzed for nestedness, both at the species and haplotype level (fungal species vs. algal haplotypes), and the networks were inspected for evidence of compartmentalization. Bayesian phylogenetic trees indicated that the widespread green alga Trebouxia decolorans associated with R. menziesii, as well as six other fungal species. Four additional fungal species interacted with four different species of Trebouxia. Only in one out of ten samples were algal haplotypes shared with the nearest neighbours of juvenile R. menziesii. Fungal-algal species interactions were compartmentalized, while at the level of algal haplotypes, nestedness was found. This pattern is similar to the compartmentalization found in other intimately interacting mutualists.

The host specificity and host sharing of avian haemoparasites (genera Haemoproteus and Plasmodium) is still poorly known, although they infect a large proportion of several studied bird populations. This study used molecular techniques to detect haemoparasites in marsh warblers and in other passerines that feed in reed beds, at 4 sites in Portugal. The host-specificity of the parasite lineages was analysed and compared with other cases described in the literature to assess whether apparent host specificity changes according to the studied system. Nine lineages of Haemoproteus and 15 of Plasmodium were found, of which only 10 Plasmodium were proven to have local transmission. Each lineage was confined to a distinct set of host species. The distribution of parasites in the host species was non-nested, meaning that specialist lineages did not always share hosts with generalists. The most prevalent lineages were those with a wider host range, indicating that the ability to infect more hosts will enhance a parasite's prevalence in its entire host range. We also found that in our areas, a specialist parasite (H. MW1) appears to have a more generalist character than described in the literature, suggesting that a parasite's apparent specialization can depend on the type of host species sampled.

The role of interspecific interactions in the structure of gastrointestinal helminth communities has been at the core of most research in parasite community ecology, yet there is no consensus regarding their general importance. There have been two different approaches to the study of species interactions in helminths. The first one consists of measuring the responses of helminth species in concomitant infections, preferably in laboratory experiments. Any change in numbers of parasite individuals or in their use of niche space, compared with what is observed in single infections, provides solid evidence that the species are interacting. The second approach can only provide indirect, circumstantial evidence. It consists in contrasting observed patterns either in the distribution of species richness of infracommunities from wild hosts, in their species composition, or in pairwise associations between helminth species among infracommunities, with the random patterns predicted by appropriate null models. In many cases, observed patterns do not depart from predicted ones; when they do, alternative explanations are usually as plausible as invoking the effect of interactions among helminth species. The present evidence suggests that the role of species interactions in helminth community structure is often negligible, but that it must always be evaluated on a case-by-case basis.

Properties of ecological networks facilitate the understanding of interaction patterns in host-parasite systems as well as the importance of each species in the interaction structure of a community. The present study evaluates the network structure, functional role of all species and patterns of parasite co-occurrence in a host-parasite network to determine the organization level of a host-parasite system consisting of 170 taxa of gastrointestinal metazoans of 39 marine fish species on the coast of Brazil. The network proved to be nested and modular, with a low degree of connectance. Host-parasite interactions were influenced by host phylogeny. Randomness in parasite co-occurrence was observed in most modules and component communities, although species segregation patterns were also observed. The low degree of connectance in the network may be the cause of properties such as nestedness and modularity, which indicate the presence of a high number of peripheral species. Segregation patterns among parasite species in modules underscore the role of host specificity. Knowledge of ecological networks allows detection of keystone species for the maintenance of biodiversity and the conduction of further studies on the stability of networks in relation to frequent environmental changes.

Developments in the study of the ecology of helminth parasites of freshwater fishes over the last half century are reviewed. Most research has of necessity been field based and has involved the search for patterns in population and community dynamics that are repeatable in space and time. Mathematical models predict that under certain conditions host and parasite populations can attain equilibrial levels through operation of regulatory factors. Such factors have been identified in several host-parasite systems and some parasite populations have been shown to persist over long time-periods. However, there is no convincing evidence that fish parasite populations are stable and regulated since in all cases alternative explanations are equally acceptable and it appears that they are non-equilibrial systems. It has proved particularly difficult to detect replicable patterns in parasite communities. Inter-specific competition, evidenced by functional and numerical responses, has been detected in several communities but its occurrence is erratic and its significance unclear. Some studies have failed to find any nested patterns in parasite community structure and richness, whereas others have identified such patterns although they are seldom constant over space and time. Departures from randomness appear to be the exception and then only temporary. It appears that parasite communities are non-equilibrial, stochastic assemblages rather than structured and organized.

Philornis is a neotropical, monophyletic genus of Muscidae (Diptera) (Couri et al. 2007) that includes many bird parasites (Skidmore 1985). The interaction system of Philornis and birds is very peculiar: fly adults are free-living and only larvae interact with birds (Couri 1985, 1999; Dodge 1963). Larval trophic habits are known for 22 of the 49 species (de Carvalho et al. 2005) and are divided into three groups: coprophagous (P. aitkeni and P. rufoscutellaris), free-living haematophagous (P. falsificus) and subcutaneous (18 spp.). Philornis downsi is unusual because the first and the early second instars display a subcutaneous phase, whereas the late second and third phases show a nest-dwelling haematophagous phase (Fessl et al. 2006).

The development of metacommunity theory, which suggests that the diversity and composition of communities is influenced by interactions with other communities, has produced new tools for evaluating patterns of community change along environmental gradients. These techniques were used to examine how plant communities changed along elevation gradients in montane tropical forests. Two transects of 0.1-ha vegetation plots were established every 50 m in elevation in the mountains of eastern Puerto Rico. The transects ranged from 300 m to 1000 m asl and 400 m to 900 m. In each plot, all free-standing woody stems greater than 1 cm in diameter at 130 cm in height were marked, measured and identified. Additional data on three similar transects were taken from the literature. The upper or lower boundaries of species ranges were significantly clumped along all five transects. Coherence, a measure of the number of gaps in species distributions, was also significant across all transects, and three transects showed significant, albeit low, nestedness. Four sites had significant species turnover. These results suggest that metacommunity techniques can be useful in searching for patterns of community change present in montane tropical forests.

The reciprocal importance of bromeliads and hummingbirds has been proposed for many years, even suggesting coevolution between these two groups. Nevertheless, data are lacking that allow a better test of the relationships involved. Here we investigate the relationship between bromeliads and hummingbirds in an area of secondary Atlantic rain forest in southern Brazil. The study examined the interactions among 12 species of bromeliad and 10 of hummingbird at Reserva Natural Salto Morato, Paraná state. The number of flowering species of bromeliad and the species richness and abundance of hummingbirds were quantified monthly between November 2004 and October 2005. Focal observations on each bromeliad species were made to determine the hummingbird visitors. Neither species richness nor abundance of hummingbirds were related to bromeliad phenology. Together with the monthly variation in visit frequency by a given pollinator to a given plant, these factors indicate a generalization in the use of bromeliads by hummingbirds and argue against tight coevolution. Ramphodon naevius and Thalurania glaucopis were the main pollinators in the community. Aechmea nudicaulis was the most generalist bromeliad species. The generalist species interacted with other generalists or with asymmetric specialists and there was no specialist–specialist interaction. This produced a strongly organized and nested matrix of interactions. This nestedness is similar to other plant-pollinators networks, supporting the hypothesis that the evolutionary relationship between bromeliads and hummingbirds is no stronger than that of other pollination networks.