The transition to sedentary agricultural societies in northern China fuelled considerable demographic growth from 5000 to 2000 BC. In this article, we draw together archaeobotanical, zooarchaeological and bioarchaeological data and explore the relationship between several aspects of this transition, with an emphasis on the millet-farming productivity during the Yangshao period and how it facilitated changes in animal husbandry and consolidation of sedentism. We place the period of domestication (the evolution of non-shattering, initial grain size increase and panicle development) between 8300 and 4300 BC. The domestication and post-domestication of foxtail (Setaria italica) and broomcorn (Panicum miliaceum) millet increased their productivity substantially, with much greater rate of change than for rice (Oryza sativa). However, millets are significantly less productive per hectare than wet rice farming, a point reflected in the greater geographical expanse of northern Neolithic millet cultures (5000–3000 BC) in comparison with their Yangtze rice-growing counterparts. The domestication of pigs in the Yellow River region is evidenced by changes in their morphology after 6000 BC, and a transition to a millet-based diet c. 4500–3500 BC. Genetic data and isotopic data from dogs indicate a similar dietary transition from 6000 to 4000 BC, leading to new starch-consuming dog breeds. Significant population increase associated with agricultural transitions arose predominately from the improvement of these crops and animals following domestication, leading to the formation of the first proto-urban centres and the demic-diffusion of millet agriculture beyond central northern China between 4300–2000 BC.

Dates from recently excavated Gangetic site of Sakas in Bihar, India, place it at ca.1800–1100 BC. The ceramic and lithic chronologies have been interpreted as Early Farming, Transitional and Chalcolithic/Developed Farming in date. However, depending on where in the Ganges Plains is studied, the time frame of Early, Developed and Advanced Farming periods varies widely, from 7th millennium to 2nd millennium BC and beyond, making the chronological framing of absolute dates within a regional scheme highly complex. In this paper we report the new radiocarbon results from Sakas and note how while these are critical for cementing the absolute dating of the site, until such time as a more stable periodization linked not only to relative and absolute dates but also human lifeways within the different zones of the Ganges plains is created, there remains difficulties in understanding how Sakas and other sites of similar date fit into the changing social, cultural and economic systems in this region.

The inability to differentiate skeletal remains belonging to the ferret from those of its wild ancestor, the European polecat, presents a particular challenge for zooarchaeologists which currently hinders a better understanding of ferret domestication history. Using a geometric morphometric approach on the mandible, this study provides a new method to distinguish the two forms. Despite a small sample size and some overlap in the dataset, this method allowed the identification of a (post)medieval specimen from Mechelen (Belgium) as a wild polecat. Results demonstrate that ferrets can largely be distinguished from polecats based on mandibular morphology.

Projected increases in human population suggest that 70% more food will be needed in the near future, this makes it imperative to search for alternative food and feed sources for human and animal nutrition to feed the exponentially growing human population. According to the FAO 2019 report, the immense challenge of achieving the Zero Hunger target by 2030 is persistent. Exploring the unexplored, refining unrefined traits, cultivating the uncultivated, and popularizing the unpopular remain the most adequate steps proposed by researchers to achieve the domestication of the undomesticated for food and nutrition security. In that line of thought, this study explored the proximate composition of 87 accessions of four wild unexplored Vigna species (V. racemosa, V. ambacensis, V. reticulata, V. vexillata) in order to reveal information leading to their future domestication and utilization. Standard procedures and methods approved by the Association of Official Analytical Chemists were used in carrying out the proximate composition (%protein, %lipid, %fibre, %ash and % moisture and % carbohydrate) of the wild Vigna legumes. The study revealed that the wild Vigna species possess a large variation range of nutrient characteristics which could be exploited in the improvement of domesticated species or guide their domestication. It was also found that some individual wild accessions have higher nutrient, content as compared with domesticated ones which could be advantageous for bio-fortification or domestication. Indications relating to the candidate accessions favourable for domestication, based on the nutrient characteristics were revealed.

Selection of desirable phenotypes and characterization of variability in economically important traits are essential for domestication of indigenous fruit trees (IFTs). Currently, participatory tree selection is a widely accepted approach in IFT domestication wherein farmers' knowledge and preferences are included in tree selection processes. In Arunachal Pradesh, India, fruits of Phoebe cooperiana are extensively consumed by people and traded across the state. In this study, we employed a selection index to screen trees for superior fruit traits from a base population of 45 farmer-identified trees of P. cooperiana in Arunachal Pradesh. Based on fruit diameter length ratio, pulp fruit ratio and yield, 19 trees were selected for superior fruit traits. The per cent improvement for 10 fruit and seed traits ranged from 0.16 to 14.56% compared to the base population. Significant variation for all fruit and seed parameters was observed among the 19 trees with coefficient of variation values ranging between 1.92% for fruit diameter and 8.26% for seed weight. There was significant positive association between economic traits including fruit weight with pulp weight, fruit diameter length ratio with fruit weight and pulp thickness with pulp weight. Principal component analysis revealed that variability was largely contributed by fruit weight (0.49), pulp weight (0.46), seed weight (0.45) and fruit diameter (0.42). Cluster analysis grouped phenotypes into seven groups with no clear clustering of individuals from the same area. The study highlights the significance of participatory tree selection approach and the benefits of individual tree selection in capturing wider variation and locating extreme phenotypes in IFT domestication.

Thailand’s northeast (NE) region is an area of high-quality cultivated rice (Oryza sativa L.) production. However, an outbreak of weedy rice has recently spread throughout the region. Weedy rice is phenotypically and morphologically similar to cultivated rice, making identification difficult. The prospective management of weedy rice in the future will involve the study of its genetic diversity and population structure in this region. This study assesses the genetic diversity and population structure of 380 weedy rice samples in the northeast of Thailand through simple sequence repeat (SSR) markers. Thirty-one SSR markers generated 213 alleles with an average of 6.87 per locus and an overall genetic diversity of 0.723. Based on its geographic origin, weedy rice in the Southern NE are showed greater genetic diversity than that in the Central NE and Northern NE areas. The outcrossing rate in all regions was relatively high, with the highest being in the Southern NE at 9.769%. According to genetic distance analysis, the clustering of weedy rice samples in northeast Thailand was not associated with the geographic region. Neighbor-joining and principal coordinate analysis revealed that the 380 weedy rice samples fell into two major clusters. Cluster I contained three weedy rice samples and four wild. In Cluster II, 377 weedy rice samples were closely related to the four cultivated rice cultivars as well as brownbeard rice (Oryza rufipogon Griffiths) wild species. The results suggest that weedy rice in northeast Thailand may have originated as a cross between cultivated and wild rice, as seen in the closely related species, O. rufipogon. Overall, the findings of this study demonstrate the high genetic diversity of weedy rice in this region. Notably, some samples adapted, performing more like cultivated rice, which may be problematic for the future production of high-quality rice in this region. The prevention of weedy rice should, therefore, be given greater consideration in future studies.

In eastern North America, Indigenous peoples domesticated several crops that are now extinct. We present experimental data that alters our understanding of the domestication of one of these—goosefoot (Chenopodium berlandieri). Ancient domesticated goosefoot has been recognized on the basis of seed morphology, especially a decrease in the thickness of the seed coat (testa). Nondomesticated goosefoot also sometimes produces seeds that look similar or even identical to domesticated ones, but researchers believed that such seeds were rare (1%–3%). We conducted a common garden experiment and a series of carbonization experiments to better understand the determinants of seed polymorphism in archaeobotanical assemblages. We found that goosefoot produces much higher percentages of thin-testa seeds (mean 50% in our experiment, 15%–34% in free-living parent populations) than previously reported. We also found that cultivated plants produce more thin-testa seeds than their free-living parents, demonstrating that this trait is plastic in response to a garden environment. The carbonization experiments suggest that thin-testa seeds preserve under a larger window of conditions than thick-testa seeds, contrary to our expectations. These results suggest that (1) carbonized, phenotypically mixed assemblages should be interpreted cautiously, and (2) developmental plasticity and genetic assimilation played a role in the domestication of goosefoot.

The common dandelion (Taraxacum campylodes G.E.Haglund) is known for its medicinal properties and as a non-toxic, highly nutritious edible plant. Even though the herb is mostly collected in the wild, the food and pharmaceutical industries prefer cultivated plant material. Cultivation offers the possibility to achieve predictable yields, ensure the botanical identity of the plants and products can be certified according to organic or biodynamic standards; therefore the interest in domestication is growing. Due to the scarcity of research on dandelion cultivation in agricultural systems, the current study focused on determining the quantitative and qualitative characteristics of 13 wild populations from Latvia in an organic farming system. Populations collected at Gluda, Priekuli, Mundigciems, Marupe as well as variety TA008 had the highest dry root weight (>100 g per plant) and exceeded the root weight of variety Nouvelle more than two-fold. The highest concentration of chlorogenic acid (CHA) (0.12%) and chicoric acid (CCA) (0.15%) was found in the wild population collected in Turaida. The wild populations from Marupe and Mundigciems had a high average root weight as well as a relatively high CHA and CCA content, making them suitable for commercial growing. The present study examined the feasibility of cultivating wild dandelion populations in an organic farming system. The results revealed a high degree of variation within and between populations; therefore, dandelion wild populations can be used for domestication, breeding and selection of accessions most suitable for the pharmaceutical or food industries.

Fur-farming is a politically sensitive issue today. Therefore, discussions on the welfare situation of commercially farmed fur animals may be particularly valuable. The aim of this Short Communication is to address some issues, in addition to those covered in the review of Nimon and Broom on the welfare of farmed mink (Animal Welfare 1999, 8: 205-228), that may have received too little attention. This Short Communication addresses domestication and animal welfare, indispensable resources and behaviours of farmed mink, and the use of negative and positive indicators of welfare in research on farmed mink.

Animal welfare is a major issue in Europe, and the production of mink, Mustela vison, has also been under debate. One common method of solving animal welfare problems is to adapt the environment to fit the behavioural needs of the animals. In comparison with other forms of husbandry, the mink production environment has remained relatively unchanged over the years and provides for some of the most obvious needs of mink. Whether today's typical housing conditions adequately meet the welfare requirements of mink is currently a topic of discussion. An alternative approach to improving welfare is to modify the animals so that they are better adapted to farming conditions. In large-scale animal production, handling of the individual can be a sporadic event, making an animal's inherent characteristics for temperament and adaptability important factors to consider with respect to its resultant welfare.

In this review we present and discuss experiments on behavioural selection for temperament, and against undesirable behaviours, such as fur chewing, in mink. Fur chewing behaviour can be reduced by selection, apparently without any negative effects, whereas only a little is known about the nature and consequences of selecting against stereotypic behaviours. Long-term selection experiments have shown that it is possible to reduce fearfulness in farmed mink. Using a relatively simple test, it is possible for farmers to add behavioural measurements to their normal selection criteria and thereby improve the welfare of farmed mink.

To use behaviours as indicators of stress it is important to understand their underlying causation. For a prey animal in the wild, such as a sheep, behavioural responses have evolved to evade detection and capture by predators. The behavioural responses of the wild ancestors of domestic sheep to the threat of predation are characterised predominantly by vigilance, flocking, flight to cover and behavioural inhibition once refuge has been reached. Some limited defensive behaviours are seen, mainly in females with young against small predators. Vigilance and flight distance are affected by the animal's assessment of risk and are influenced by the environment, social group size, age, sex and reproductive condition, as well as by previous experience with potential predators. Under conditions of stress, domestic sheep show similar behavioural reactions to wild sheep, although the threshold at which they are elicited may be elevated. This is particularly evident when comparing less selected hill breeds with more highly selected lowland breeds, and suggests that a continuum of responsiveness exists between wild and feral sheep, through hill breeds to the lowland sheep breeds. However, this may be confounded by the previous experience of the breeds, particularly their familiarity with humans. Behavioural and neurobiological evidence suggests that, although the behavioural response to predators (vigilance, flight) is innate, the stimuli that elicit this behavioural pattern may have a learned component. Since vigilance and flight distances are affected by the animal's perception of threat, they may be useful indices of stress in sheep and, as graded responses, give some indication of the level of threat experienced by the sheep. Thus they may indicate the amount of fear or distress experienced by the sheep and hence have the potential to be used in the assessment of welfare states.

White-lipped (Tayassu pecari) and collared (Pecari tajacu) peccaries can be farmed as an alternative to subsistence hunting in Neotropical countries. The animals often show high reactivity to handling, usually involving capture with a net, which is a cause for concern because it poses risks to both animals’ and keepers’ welfare. We aimed to assess the temperament of both peccary species, evaluating animals’ reactions during handling, providing an emotional indicator and a new animal selection criterion for peccary farms. Three indicators were used to assess the temperament of 17 white-lipped and 19 collared peccaries: qualitative behaviour assessment (QBA, by using 12 behavioural adjectives); time to drive each animal through a corridor into a chute (TD, s); and flight speed (FS, m s−1). A Principal Components Analysis was performed for the QBA data to define a temperament index (TI). White-lipped peccaries showed TI scores associated with worse temperament traits than collared peccaries. White-lipped peccaries showed higher TD and FS means than collared peccaries. We found a correlation between TD and FS, but not between TD and TI, nor between FS and TI. The lack of correlation between all temperament indicators occurred, probably, because they measure different aspects of peccaries’ reactions toward humans and the farm environment during handling. A wide phenotypic variability was found among individuals within both species’ populations. The results provide an opportunity to address the role of temperament assessment, improving handling procedures and exploring the possibility of including temperament as a selection criterion in captive breeding programmes.

By definition, the companion-animal niche demands merely that animals must provide companionship. At first glance, this may seem easy enough, but the forces that contribute to success in this niche are complex. Indeed, success as a companion is rarely measured in terms of biological fitness, and empirical measures of the breeding value of stock remain elusive. The challenges in the niche are manifold and reflect the need for companion animals to show behavioural flexibility, an attribute variously labelled compliance, tolerance, and even forgiveness. The borders of the niche are blurred and there is often negligible communication between buyers and suppliers of companion animals. In addition, demand for a given phenotype is subject to considerable flux. Paradoxically, companion animals may be victims of their own success. We value the social feedback they provide and yet often leave them alone for lengthy periods. There is an inherent tension between the desire to share the company of these animals and the reality that some humans find an animal's need for social contact, and indeed many species-specific behaviours, unacceptable. Also, the animal-sense of owners may be declining, reflecting reduced community exposure to animals in non-companion contexts, such as on farms and as modes of transport. Often, in the case of dogs, the companion-animal niche is occupied by a breed that was developed to work in a specific role that required endless energy and high reactivity. We select for conformation and movement in what were once working animals and yet many owners reject animals for behavioural traits that were subject to scarcely any primary selection. Since neutering of companion animals is, for many excellent reasons, now so common, the genes of outstandingly suitable pets are routinely lost to the gene pool. Companion animals may be living longer and yet, as they age, the dog-human relationship can shift diametrically. Senior dogs often become less appealing to and yet more dependent on, and needful of attention from, their owners. In Australia, urban companion-animal ownership per capita is declining in tandem with falls in living space. Despite this reduced demand, the pet industry uses positive imagery and targeted research to promote pet acquisition, helping to maintain a situation in which supply generally exceeds demand. This results in the annual euthanasia of thousands of excess animals in shelters and pounds. The pet industry also motivates owners to be consumers so it is unsurprising that expenditure on pets in Australia is rising. Sometimes food is promoted as a means of demonstrating affection. In many developed nations, unfortunately, pet owners have the resources to respond to marketing (among other forces) by overfeeding animals, often to the point of obesity. Obesity is considered to be a significant welfare problem for companion dogs. In summary, it seems that these shifts and growing paradoxes are making the companion-animal niche more challenging than ever. Perhaps science will help make the niche more predictable, but this alone will not guarantee the welfare of the animals that occupy it.