Understanding the distribution and habitat requirements of species is crucial for designing conservation actions, yet this information is not available for many plant species. We report the first confirmed wild populations of Porroglossum parsonsii, which, because of its horticultural value, is commercialized in national and international markets, from where it was first described to science. Our large-scale survey of 341 10 × 30 m plots spanning Andean forests, paramo habitats and pasturelands in Colombia suggests that P. parsonsii has a restricted geographical distribution in Andean forests with high forest cover (71.4–86.2%), where it occurs in low numbers (5–17 individuals per plot). Because of its market value (USD 18–20 per plant) there is a risk the species could be collected illegally, and therefore the habitat of the species in the Santuario de Fauna y Flora de Iguaque requires appropriate conservation.

The Endangered dhole Cuon alpinus is a medium-sized canid that was historically distributed widely across East, Central, South and Southeast Asia. In Nepal, following heavy persecution during the 1970s and 1980s, the species was locally extirpated across large parts of the country. After decades of near absence, the dhole is reportedly showing signs of recovery in various areas of Nepal. We carried out three surveys using camera traps (resulting in a total of 6,550 camera-trap days), reviewed literature and interviewed herders and conservation practitioners (40 interviews) to determine the historical and current distribution of dholes in the country, and the species’ current status. Our camera traps recorded five images of dholes, and the literature review and interview survey provided further insights into the historical and current presence of dholes in Nepal. The combined findings suggest dholes have recolonized many areas where they had been locally extirpated, such as the Annapurna Conservation Area in central Nepal and the Tinjure–Milke–Jaljale forests in the eastern part of the country. Although these returns are encouraging, challenges remain for dhole recolonization, including conflict with livestock herders, human hunting of wild ungulates affecting the species’ prey base, increasing infrastructure development in forested areas, and diseases.

Many Afro-Palearctic songbird migrants have declined, with conservation efforts mainly focused on the restoration of breeding habitat. However, pressures outside the breeding season might play a role. This includes the possibility that local relict populations no longer maintain the original phenotypic variation in migration patterns, with a loss of flexibility. The Great Reed Warbler Acrocephalus arundinaceus kept stable population levels in central and eastern Europe, but was almost extinct in the western part of the breeding range. In the Rhine delta the population declined from 10,000 individuals around 1950, to fewer than 100 at present. Here we document migratory timing, routes, and destinations of members of this remnant songbird population. It turned out that the remaining adults still showed high diversity in migratory phenotypes. This is even true in each of the two last tiny subpopulations in the Netherlands (of 50 and 15 pairs). So, even very small populations maintain the possible adaptive phenotypic variation, and with hindsight this justifies the breeding habitat restoration efforts currently underway.

Population size and geographical range are the key quantitative criteria used by the IUCN to assess the conservation status of a species. However, such information is often incomplete and inconsistent, even for seemingly abundant species. To assess the population and conservation status of Indian primates, we conducted a systematic review of recent research using the searching, appraisal, synthesis and analysis (SALSA) approach. We reviewed a total of 41 studies on Indian primates conducted during the last 2 decades (2000–2021) for information on various parameters that influence their conservation. We found that 20 out of a total of 26 primate species were evaluated for their population status, and the majority of these studies (71%) showed an overall declining population trend. Remarkably, all but one of the studies conducted exclusively within protected areas revealed declining population trends, whereas trends were more variable for primate populations in non-protected areas. Our data indicate that only 27% (n = 7) of Indian primate species have been surveyed or re-surveyed to assess their population status within the last 5 years. Although threats vary in time and space from species to species, 78% of the studies recorded natural system modifications including habitat loss and fragmentation among the main threats to the survival of Indian primates. Most studies on the population status of Indian primates have either been spatially limited or used outdated methods. We recommend that future studies adopt robust techniques to estimate populations and work across larger geographical scales to develop effective management strategies for the conservation of primates in India.

Predictions of species-level extinction risk from climate change are mostly based on species distribution models (SDMs). Reviewing the literature, we summarise why the translation of SDM results to extinction risk is conceptually and methodologically challenged and why critical SDM assumptions are unlikely to be met under climate change. Published SDM-derived extinction estimates are based on a positive relationship between range size decline and extinction risk, which empirically is not well understood. Importantly, the classification criteria used by the IUCN Red List of Threatened Species were not meant for this purpose and are often misused. Future predictive studies would profit considerably from a better understanding of the extinction risk–range decline relationship, particularly regarding the persistence and non-random distribution of the few last individuals in dwindling populations. Nevertheless, in the face of the ongoing climate and biodiversity crises, there is a high demand for predictions of future extinction risks. Despite prevailing challenges, we agree that SDMs currently provide the most accessible method to assess climate-related extinction risk across multiple species. We summarise current good practice in how SDMs can serve to classify species into IUCN extinction risk categories and predict whether a species is likely to become threatened under future climate. However, the uncertainties associated with translating predicted range declines into quantitative extinction risk need to be adequately communicated and extinction predictions should only be attempted with carefully conducted SDMs that openly communicate the limitations and uncertainty.

Conservation of poorly known species is challenging as lack of knowledge on their specific requirements may hamper effective strategies. Here, by integrating biogeographical and landscape analyses, we show that informed actions can be delineated for species with limited presence-only data available. We combine species distribution and connectivity models with temporal land cover changes to define priority areas for conservation of the endemic Brazilian three-banded armadillo, one of the most threatened xenarthrans that was once considered extinct in the wild. We revealed that areas of savanna and grassland are the most suitable habitats for the species and that uplands in the Caatinga ecoregion have a greater likelihood for dispersal. The few remnant armadillo populations are spatially associated with core areas of natural vegetation remnants. Worrisomely, 76% of natural core areas were lost in the past 30 years, mirroring the species’ severe population decline. Preserving the remnant core natural areas should be a high priority to ensure the species’ survival. We highlight key areas for proactive and reactive conservation actions for the three-banded armadillo that will benefit other threatened sympatric species. Our integrative framework provides a set of valuable information for guided conservation management that can be replicated for other poorly known species.

Monitoring parrot populations is of high importance because there is a general lack of quantified population trends for one of the most threatened avian orders. We surveyed parrots in Nicaragua in 1995, 1999, 2004, and 2013 at a minimum of 227 points within 56 sites stratified among the Pacific, Central Highlands, and Caribbean biogeographical regions to assess population trends. From point-count data we calculated encounter rate, flock rate, and flock size metrics and we used presence/absence data to generate species-specific occupancy estimates. Encounter rate, flock rate, and flock size data suggested family-level declines from 1995 to 2004 with some recovery between 2004 and 2013. Patterns of parrot occupancy varied among species with four decreasing, five increasing, and two with no detectable change. Six species of conservation concern are identified, including the Critically Endangered Great Green Macaw and Yellow-naped Parrot, additionally Olive-throated Parakeet, Scarlet Macaw, Brown-hooded Parrot, and White-crowned Parrot, only listed as Least Concern. All six are likely suffering from deforestation and potential unchecked trade activity in the Caribbean. Differing population trends of the regionally disjunct Yellow-naped Parrot subspecies suggest a link to variable deforestation and trade pressure experienced between the Pacific and Caribbean. Our results highlight the importance of actively monitoring changing parrot populations, even when considered Least Concern, so that directed conservation actions can be taken if needed.

Understanding how vegetation structure and floristic composition vary across landscapes is fundamental to understand ecological patterns and for designing conservation actions. In a patch-landscape approach, we assessed the β-diversity (q0 order – rare species, q1 order – common species, and q2 order – dominant species) of plants between forest patches and surveyed plots in Atlantic Forest patches located in the Pernambuco Endemism Centre, northeastern Brazil. Furthermore, we tested the influence of predictor variables linked to landscape (forest cover and edge density) and habitat (basal area), as well as the geographical distance between forest patches and plots on the β-diversity in each forest patch and plot. We measured and identified a total of 1,682 individuals (trees and lianas), corresponding to 248 species, 116 genera, and 56 families in 10 plots (50 × 2 m) from each forest patch. The β-diversity presented lower values for the Mata de Água Azul patch at a landscape scale (i.e., between forest patches) and Mata dos Macacos patch at a site scale (i.e., between plots) for all orders. Geographical distance positively influenced the β-diversity at the landscape scale, and higher turnover between plots (e.g., within forest patches) was positively associated with differences in geographical distance, edge density, forest cover, and basal area. Our results indicate the need to conserve forest patches distributed across a wide area (distant sites) that encompass different landscape contexts with different vegetation structures, in order to conserve greater floristic diversity.

Assessing the conservation status of species is essential for implementing appropriate conservation measures. A lack of evidence of threats, rather than showing an absence of impacts, could reflect a lack of studies on how human activities could result in species population declines. The range of Prince Bernhard's titi monkey Plecturocebus bernhardi is restricted to the Arc of Deforestation, a deforestation hotspot in south-eastern Amazonia. Despite this, it is categorized as Least Concern on the IUCN Red List. To reassess the conservation status of P. bernhardi, we carried out surveys during 2015–2017 to delimit the geographical distribution of the species and estimate its population density and abundance. We then used spatial predictive modelling to examine future habitat and population loss within its range. Plecturocebus bernhardi occurs over an area of 131,295 km2. Its mean group size was 2.8 individuals/group and its density 10.8 individuals/km2 and 3.8 groups/km2. Habitat loss was estimated to be 58,365 km2 (44.5% of its current range) over the next 24 years (three P. bernhardi generations) under a conservative governance model of deforestation and 105,289 km2 (80.2%) under a business-as-usual model. These numbers indicate that P. bernhardi is threatened and should be categorized as Vulnerable, at least, using the IUCN Red List criteria. We recommend the reassessment of other Least Concern primate species from the Arc of Deforestation using a similar approach.

Sarawak is the largest state in the megadiverse country of Malaysia. Its rich biodiversity is threatened by land-use change and hunting, with mammalian carnivores particularly affected. Data on the ecology, occurrence and distribution of small carnivores are crucial to inform their effective conservation, but no large-scale assessments have previously been conducted in Sarawak. Here we examine the status of the five species of felids in Sarawak based on data from camera-trap studies over 17 years (May 2003–February 2021) across 31 study areas, including protected areas of various sizes, production forests and forest matrix within oil palm plantations. Felids were detected at 39% of 845 camera stations. The marbled cat Pardofelis marmorata and Sunda clouded leopard Neofelis diardi had higher probabilities of occurrence in protected than unprotected areas, and vice versa for the leopard cat Prionailurus bengalensis and bay cat Catopuma badia. The marbled and bay cats were mostly diurnal, and the leopard cat was predominantly nocturnal; activity patterns did not substantively differ between protected and unprotected sites. The probabilities of occurrence of marbled and bay cats increased with greater distance from roads. The leopard cat and flat-headed cat Prionailurus planiceps were more likely, and the clouded leopard less likely, to occur near rivers. Flat-headed cats preferred peat swamp forest, bay cats lowland forest, and marbled cats and clouded leopards occurred in both lowland and montane forest. Felids may tolerate higher elevations to avoid anthropogenic disturbance; therefore, it is critical to preserve lowland and mid-elevation habitats that provide refugia from climate change and the destruction of lowland habitat.

Olive groves in the Mediterranean basin have undergone a tremendous increase during the last two decades, with most of the new olive groves being planted on arable land. This conversion may affect habitat suitability for steppe birds, which are associated with arable land and other open-land habitats, such as natural pastures. In this work, we evaluate the presence of new olive groves in the distribution of the Great Bustard Otis tarda and the Little Bustard Tetrax tetrax in Southern Spain (the largest olive oil production zone in the world), and we compare the percentage of different land uses in 2000 and 2018 using data provided by the Corine Land Cover. From 2000 to 2018, new olive groves occupied 2.14 and 2.61% of the distribution areas of the Great Bustard and the Little Bustard, respectively. The decrease in arable land and the increase in permanent crops were the main drivers of the landscape composition changes during the study period. The fragmentation index of arable land was higher in 2018 than 2000. These changes in the landscape suggest a decrease in habitat availability and suitability for steppe birds that could affect the distribution and abundance of their populations. Moreover, there were no differences in the proportion of new olive groves planted inside and outside the limits of Important Bird Areas (IBAs) from 2000 to 2018, which were created to protect these steppe birds, thus suggesting that the management policy of the IBAs should be reviewed to prevent harmful land-use changes.

The hog deer Axis porcinus formerly occurred in south-west China but has not been recorded there since 1965. To investigate the current status of the species in China, we conducted interviews, and transect and camera-trap surveys during October 2018–June 2020 to search for signs of hog deer across its historical range in the country. We interviewed 50 local inhabitants and surveyed 14 line transects in four counties of Lincang City, Yunnan Province. The camera traps were deployed in Nangunhe Nature Reserve (39.4 km of transects, 82 camera stations, 15,120 camera days) and Daxueshan Nature Reserve (41.1 km of transects, 68 camera stations, 13,554 camera days). We found no hog deer tracks and no hog deer were trapped by cameras. The floodplain grasslands preferred by hog deer along Nanting River have been transformed into agriculture plantations and human settlements. Our findings suggest that hog deer may have been extirpated from China, most likely as a result of habitat loss and overhunting. The conservation priorities for this species in China are the establishment of a protected area in the Nanting River watershed, restoration of habitat and reintroduction of individuals from range countries.

The use of criterion A of the IUCN Red List to categorize species as threatened that have undergone recent decline can lead to the listing of relatively common and widespread species. Loss of habitat through deforestation is a common cause of decline throughout much of the world but is often not incorporated into assessments because of uncertainty about the magnitude of change. A recent assessment of eucalypt species in Australia subject to deforestation provides a method for assessment under criterion A and has implications for listing of long-lived, widespread species affected by deforestation. Scenarios for two widespread eucalypt species subject to extensive deforestation are used to demonstrate how the threat status of a species may be recategorized in a lower threat category as declines resulting from a threatening process are mitigated. I argue that criterion A indicates an appropriate assessment of extinction risk and I provide a simple function based on predicted diminishment of the population decline to identify when a species could be disqualified from a threat category under subcriterion A2 (past decline).

The Critically Endangered Chapman's pygmy chameleon Rhampholeon chapmanorum is endemic to the low elevation rainforest of the Malawi Hills in southern Malawi. Much of this forest has been converted to agriculture and it was uncertain whether chameleon populations have persisted. We used current and historical satellite imagery to identify remaining forest patches and assess deforestation. We then surveyed forest patches for the presence of this chameleon, and assessed its genetic diversity and structure. We estimated that 80% of the forest has been destroyed since 1984, although we found extant populations of the chameleon in each of the patches surveyed. Differentiation of genetic structure was strong between populations, suggesting that gene flow has been impaired. Genetic diversity was not low, but this could be the result of a temporal lag as well as lack of sensitivity in the mitochondrial marker used. Overall, the impact of forest loss is assumed to have led to a large demographic decline, with forest fragmentation preventing gene flow.

Landscape-scale habitat loss can change the floristic composition of forest fragments, affecting the survival of specific groups of plants, as shade-tolerant and emergent trees. This increasing in tree mortality creates forest canopy gaps of different sizes that ultimately determine the solar radiation available in the forest understorey. We conducted a study aiming to assess how the loss of forest cover at landscape level (i.e. deforestation) affects the sunfleck dynamics, a proxy of light regime in forest understorey. We expected that fragments located in landscapes with less forest cover have a high number of larger canopy gaps and, consequently, long-lasting sunflecks. In each forest fragment, a 100 per 50 m plot was established, and in each plot, we took 10 hemispherical photographs. The images were analysed using the Gap Light Analyzer software. The sunflecks were divided into six temporal classes. We evidenced that landscape-scale deforestation increased the frequency of all sunfleck intervals >8 min, particularly the long-lasting (> 32 min) sunflecks. We propose that the increasing frequency of long-lasting sunflecks reduces suitability of microhabitat to some shade-tolerant species in local fragments, a potential proximal mechanism contributing to compositional shifts of tree assemblages observed in forest fragments within deforested landscapes.

Tropical forest hotspots have a high diversity of species but have lost > 70% of their original vegetation cover and are characterized by a multitude of small and isolated fragments. Paradoxically, conservation actions in these areas are still mainly focused on protection of large tracts of forests, a strategy now infeasible because of the small area of forest remnants. Here we use the Vulnerable black-handed titi monkey Callicebus melanochir as a model to study the effects of habitat loss, fragmentation and degradation on arboreal mammals and to provide insights for science-driven conservation in fragmented landscapes in tropical forest hotspots. We surveyed 38 Atlantic Forest fragments in Bahia State, Brazil and assessed the effects of patch area, quality and visibility, and landscape connectivity on the occurrence of our model species. Patch area was the single best model explaining species occurrence. Nonetheless, patch quality and visibility, and landscape connectivity, positively affect occurrence. In addition to patch area, patch quality, patch visibility and landscape connectivity are useful for predicting the occurrence of arboreal mammals in the fragments of tropical forest hotspots. We encourage the assessment of habitat quality (based on remotely sensed vegetation indices) and habitat visibility (based on digital elevation models) to improve discoverability of arboreal mammal populations and selection of fragments for conservation purposes across fragmented landscapes of tropical forest hotspots. Large remnants of tropical forest hotspots are scarce and therefore we require baseline data to support conservation actions and management in small forest fragments.