In this paper we continue the study of automorphism groups of constant-length substitution shifts and also their topological factors. We show that, up to conjugacy, all roots of the identity map are letter-exchanging maps, and all other non-trivial automorphisms arise from twisted compressions of another constant-length substitution. We characterize the group of roots of the identity in both the measurable and topological setting. Finally, we show that any topological factor of a constant-length substitution shift is topologically conjugate to a constant-length substitution shift via a letter-to-letter code.