Core subset selection from collections hosted by seed banks, grow in importance as the number of accessions and genetic marker information rapidly increases. A data set of 20,526 single-nucleotide polymorphism (SNP) markers characterizing 7986 Mexican creole wheat landraces, was used to test 11 methods for core subset selection, through optimization criteria containing average genetic distance and genetic diversity. Allele richness was used as an additional criterion to qualify the generated core subsets. Three replications with random samples of 1500 SNP loci, each comprising a maximum of 3000 alleles, were used to perform the method evaluations through four different objective functions. The LR greedy search (LR) and LR with random first pair (LRSemi) were consistently best across all assays for maximizing the objective functions, and they performed well even for criteria not included in those functions. The Tukey's HSD (honest significant difference) multiple comparisons grouped those methods together with the sequential forward selection (SFS) and SFS with random first pair (SFSSemi) strategies as the top set of approaches. All of them are simple heuristic maximization algorithms, and outperformed two more sophisticated optimization approaches: parallel mixed replica exchange and replica exchange Monte Carlo. For their efficiency to optimize the objective functions and computing speed, the LRSemi and SFSSemi methods demonstrated to be good alternatives for core subset selection from large collections of highly homozygous accessions characterized by many biallelic markers.

The impact of two weed management systems on the weed seed reserves of the soil, on the yearly weed problem, and on barley (Hordeum vulgare L. ‘Steptoe’), corn (Zea mays L. ‘Pioneer 3709′), and sugarbeet (Beta vulgaris L. ‘Mono Hy D2′) production was assessed where these crops were grown in rotation for 6 consecutive years. Weeds were controlled in each crop with a moderate (system I) or intensive (system II) level of herbicides, plus conventional tillage. Weed seeds from seven annual genera were identified, with redroot pigweed (Amaranthus retroflexus L. ♯3 AMARE) and Chenopodium comprising 56 and 30%, respectively, of the initial 1377 million weed seeds/ha that were present in the upper 25 cm of the soil profile. After the sixth cropping year, the overall decline in the total number of weed seeds in soil was 96% in system I and 97% in system II. Over the 6-yr period, about 1.3 times more weeds escaped control in system I than in system II; and within a crop, the fewest number of weeds escaped annually in sugarbeets, and the most in barley. Yields of barley grain, corn silage, and recoverable sucrose were similar each year in the two weed management systems.

The impact of two weed management systems on the weed seed reserves of the soil, on the yearly weed problem, and on corn (Zea mays L.) production was assessed where corn was grown under furrow irrigation for 6 consecutive years. In one system, 2.2 kg/ha of atrazine [2-chloro-4-(ethylamino)-6-(isopropylamino)-s-triazine] was applied annually to the same plots as a preemergence treatment. In the other system, a mixture of 1.7 kg/ha of atrazine plus 2.2 kg/ha of alachlor [2-chloro-2′,6′-diethyl-N-(methoxymethyl)acetanilide] was applied preemergence, followed by a postemergence application of 0.6 kg/ha of the alkanolamine salts of 2,4-D [(2,4-dichlorophenoxy)acetic acid]. The response of weeds and corn is presented only where atrazine was applied annually because the results were similar between both weed management systems. Weed seeds from eight annual species were identified, with redroot pigweed (Amaranthus retroflexus L. ♯ AMARE) and common lambsquarters (Chenopodium album ♯ CHEAL) comprising 82 and 12%, respectively, of the initial 1.3 billion weed seeds/ha that were present in the upper 25 cm of the soil profile. After the sixth cropping year, the overall decline in the total number of redroot pigweed and common lambsquarters seeds was 99 and 94%, respectively. Very few weeds produced seeds during the first 5 yr, and no weed seeds were produced during the sixth year where atrazine was applied annually. When the use of atrazine was discontinued on one-half of each plot at the beginning of the fourth year, the weed seed reserve in soil began to increase due to an increase in the weed population. After 3 yr of not using atrazine, the weed seed reserve in soil had built up to over 648 million seeds/ha, and was then within 50% of the initial weed seed population. In the fifth and sixth years, grain yields were reduced 39 and 14%, respectively, where atrazine had been discontinued after 3 yr.

Seeds of the geographically-widespread Solidago altissima and S. nemoralis and the narrow-endemic S. shortii were buried in pots of soil and placed in a glasshouse without temperature control. After 0.3–4.3 years of burial, some seeds (21–60%) of all three species were viable and they germinated to 75–100% during 2 weeks of incubation in light at 30/15°C. Soil samples collected from several population sites of S. altissima, S. nemoralis and S. shortii were placed in the glasshouse and monitored for seedling emergence. During the first, second, third, fourth, fifth and sixth springs, the number of S. altissima seedlings m−2 emerging was 108–1080, 8–494, 0–520, 0–69, 0–6 and 3, respectively, of S. nemoralis was 108–1122, 17–667, 0–42, 0–6, 0, 0 and 0, respectively, and of S. shortii was 61–1753, 0–25, 0–6, 0, 0 and 0, respectively. More seedlings emerged from disturbed than from non-disturbed soil, but the differences were not significant. Thus, although some seeds of all three species buried in pots remained viable in soil throughout the 4.3-year burial period, longevity was greater and size of seed bank larger in field-collected soil samples containing seeds of the geographically-widespread species than in those containing seeds of the narrow endemic. Although 34 studies have reported seeds of 17 species of Solidago present in soil seed banks, the present study is the first to show, conclusively that Solidago can form a persistent seed bank.

Soil samples were collected from the original land surface beneath an experimental earthwork, constructed in 1963 at Morden Bog, Dorset, England, and excavated in 1996. Large numbers of seeds of Calluna vulgaris, Erica cinerea and E. tetralix germinated from the samples, but other species present in the original flora, including Ulex minor and several grasses, were absent. The results confirm the previously-documented longevity of Calluna and E. tetralix, and for the first time demonstrate similar longevity in E. cinerea.

Seed dormancy and germination of Senna marilandica and S. obtusifolia were compared in greenhouse and laboratory studies. About 90% of the S. obtusifolia seeds were green and had hard seed coat dormancy, whereas the other 10% were brown and nondormant. Seed-colour morphs did not occur in S. marilandica, and nearly 100% of the seeds had hard seed coat dormancy. Seeds of S. obtusifolia were significantly heavier than those of S. marilandica. Mechanical scarification was very effective in overcoming dormancy in seeds of both species. However, concentrated sulfuric acid, absolute ethanol and boiling water were less effective in breaking dormancy in seeds of S. marilandica than in those of S. obtusifolia. Further, incubating seeds at 30/15 to 40/25°C and dry-heat treatments at 80–100°C were ineffective in breaking dormancy in S. marilandica, but significantly increased germination percentages in S. obtusifolia. In neither species were simulated daily/seasonal temperature shifts effective in breaking dormancy. Scarified seeds of both species germinated over a wide range of temperatures in both light and darkness. Under near-natural temperature conditions, seeds of S. marilandica germinated in spring only, whereas those of S. obtusifolia emerged in late spring and throughout summer. Both species can form a long-lived seed bank. Dormancy break by high field temperatures in seeds of S. obtusifolia allows this species to germinate throughout the warm growing season and thus contributes to its success as a weed in arable crops.