Twenty-five years ago, a basic tenet of biochemistry
held that enzymes are made solely of protein. Ribosomes,
which are large ribonucleoprotein enzymes, were conveniently
overlooked (but see Woese, 1967; Crick, 1968; Orgel, 1968).
The then current orthodoxy was first challenged by the
discovery that Escherichia coli RNase P had an
essential RNA subunit (Stark et al., 1978) and completely
demolished when the catalytic properties of RNA were described
(Kruger et al., 1982; Guerrier-Takada et al., 1983; Buzayan
et al., 1986; Hutchins et al., 1986). With respect to RNase
P, in particular, a new orthodoxy arose: RNase P from any
source would have an essential RNA subunit although not
necessarily a catalytic one. This adolescent orthodoxy
is now being challenged by reports of putative RNase P
activities isolated from certain organelles that lack an
RNA subunit (Manam & van Tuyle, 1987; Rossmanith &
Karwan, 1998; Wang et al., 1998). The following questions
must be asked of the aforementioned data: (1) Are the substrate
specificities the same as in the canonical reaction? (2)
Are the chemical mechanisms of the newly identified “RNase
P” reactions identical to the canonical reaction?
(3) Have completely purified (i.e., cloned, expressed,
and/or purified) activities been studied? (4) Have the
phenotypes of these “new” enzymes been verified
by genetic means? (5) In sum, are we dealing with RNase
P or some other activities that share some characteristics
with RNase P? Should these be called RNase P, in any case?