Stable isotope compositions were studied in particulate organic matter (POM), zooplankton and different trophic groups of teleosts to compare food chains based on plankton at two sites (lagoon and outer slope) in a New Caledonian coral reef. For each trophic compartment, δ13C values were always lower in the outer slope than in the lagoon. This result may be explained by potential differences in POM composition between the two environments, suggesting that the two food chains are based on different primary sources of carbon. In contrast, δ15N values did not vary between the lagoon and the outer slope, indicating that these two food chains presented similar length and trophic levels, despite being distinguishable.