Abundance and structure of phytoplankton and zooplankton, along with their relationship to hydrographic conditions were determined in the highly stratified estuary of the karstic Ombla River, south-eastern Adriatic. Sampling was carried out during 17 cruises within a one year period. River discharge lowered surface salinity and enriched the estuary with NO3 and SiO4. Nutrient ratios suggested that PO4 was the most likely limiting nutrient for phytoplankton growth in the estuary. Diatoms were present in low numbers and dominated the winter–early spring period. Dinoflagellates dominated from the end of May to August. Phytoplankton and zooplankton were composed mostly of marine species and their abundance decreased in seaward direction. Planktonic populations are controlled by the river runoff, temperature, salinity, nutrient concentrations and grazing. The results were consistent with the hypothesis that no algal blooms have been recorded due to short renewal time.

The lessepsian migrant fish Decapterus russelli was recorded for the first time on the coast of Turkey, north-eastern Mediterranean. A sampling campaign was carried out from January 2008 to March 2010. A total of sixty-seven specimens was caught with trawl nets at a depth of 15–18 m. Decapterus russelli was found in Iskenderun Bay on 17 October 2009, Mersin Bay and Erdemli Bay on 17, 18 and 23 March 2010. Some morphometric and meristic characteristics of this species are presented here.

The demersal fish assemblages of the south-western Sea of Marmara and the north-eastern Aegean Sea were examined in relation to their biogeographical and environmental conditions. Sampling was carried out during bottom trawl surveys conducted during five periods between June 2006 and August 2007. A total of 40 hauls were processed, including 16 in the Sea of Marmara (38–74 m deep) and 24 in the north-eastern Aegean Sea (63–401 m deep). A total of 47,940 individuals, from 91 species and 47 families were collected. Cluster analysis of catch data indicated that there were three assemblages, one in the shelf of the Sea of Marmara and two in the Aegean Sea (<100 and >200 m depth). The numerical abundance and biomass of fish, mean fish weight, mean species richness, diversity and evenness were compared between these assemblages. Multivariate analysis was used to test differences in environmental conditions between areas, and relationships between species and environmental variables were explored by using redundancy analysis. In addition to bathymetric differences, differences in both diversity and species composition were observed between shelf assemblages in the two nearby areas. The distinct biogeographical, environmental characteristics (depth, dissolved oxygen and temperature) and fishing pressure are discussed as the main factors which could explain the differences detected.