Export of unspliced mRNA to the cytoplasm is required for the
replication of all retroviruses. In simian type D retroviruses,
the RNA export is mediated by the constitutive transport element
(CTE) that binds the cellular nuclear export factor 1, NXF1(TAP).
To search for potential cellular RNA substrates for NXF1, we
have set up an in vitro selection procedure, using an RNA library
expressed from total human genomic DNA. A sequence that was
isolated most frequently as independent clones exhibits extensive
homology to the 3′ untranslated region of expressed LINE1
(L1) retrotransposons. This region, termed L1-NXF1 binding element
(L1-NBE) bears no structural resemblance to the viral CTE, but
binds NXF1 as strongly as CTE, based on gel mobility shift
competition assays. A deletion analysis of the NXF1 protein
reveals that CTE and L1-NBE have different, but overlapping,
binding domains on NXF1. Placed in an intron, L1-NBE is capable
of mediating nuclear export of lariat RNA species in Xenopus
laevis oocytes and of an unspliced HIV-1 derived RNA in
human 293 cells, suggesting that it may function as a nuclear
export element for the intronless L1 mRNA.