RNA interference (RNAi) is a cellular defense mechanism that
uses double-stranded RNA (dsRNA) as a sequence-specific trigger
to guide the degradation of homologous single-stranded RNAs.
RNAi is a multistep process involving several proteins and at
least one type of RNA intermediate, a population of small
21–25 nt RNAs (called siRNAs) that are initially derived
from cleavage of the dsRNA trigger. Genetic screens in
Caenorhabditis elegans have identified numerous mutations
that cause partial or complete loss of RNAi. In this work, we
analyzed cleavage of injected dsRNA to produce the initial siRNA
population in animals mutant for rde-1 and rde-4,
two genes that are essential for RNAi but that are not required
for organismal viability or fertility. Our results suggest distinct
roles for RDE-1 and RDE-4 in the interference process. Although
null mutants lacking rde-1 show no phenotypic response
to dsRNA, the amount of siRNAs generated from an injected dsRNA
trigger was comparable to that of wild-type. By contrast, mutations
in rde-4 substantially reduced the population of siRNAs
derived from an injected dsRNA trigger. Injection of chemically
synthesized 24- or 25-nt siRNAs could circumvent RNAi resistance
in rde-4 mutants, whereas no bypass was observed in
rde-1 mutants. These results support a model in which
RDE-4 is involved before or during production of siRNAs, whereas
RDE-1 acts after the siRNAs have been formed.