Functional diversity indices have been used to differentiate the relative contribution of stochastic and deterministic processes that modulate the assemblage of communities; however, knowledge regarding the relative contribution of assemblage mechanisms in forest communities is scarce. We analysed the assembly mechanisms driving forest assemblages along a topographic gradient at two spatial scales (1000 m2 and 3000 m2) for three different forest types from subtropical mountain forests (pine-oak, mixed pine-broadleaf and broadleaf forest) in western Mexico, using null models of multi-trait indices. The forest structure differed along the topographic gradient. Upper slopes were dominated by Pinus douglasiana with an importance value index (IVI) of 0.8, while 10 and 13 tree species were required in the middle and lower slopes, respectively, to reach the same IVI. The results support the idea that the subtropical montane forest of western Mexico is a mosaic of communities, when analysed at a scale of 1000 m2 the forest assembly was mainly explained by stochastic processes, while analysis at the scale of 3000 m2 showed that functional convergence of species were the main mechanisms of the assemblage of the pine-oak forest communities due to an abiotic stressful environment.

Weeds are a fundamental component of agroecosystems and, if not appropriately managed, can cause severe crop yield losses. New perspectives on weed management are required, because current approaches, such as herbicide application or soil tillage, have significant environmental and agronomic drawbacks. We propose the concept of “neutral weed communities,” which are weed communities that coexist with crops and do not negatively affect crop yield and quality compared with weed-free conditions. Management practices that promote neutral weed communities can enable reduced use of herbicides and soil tillage while enhancing ecosystem services and biodiversity. We report scientific evidence of neutral weed communities and survey ecological explanations for why different weed communities have different effects on crop production. We also propose two weed management approaches for attaining neutral weed communities. The first approach aims to maximize weed biodiversity using traditional approaches such as cropping system diversification and integrated weed management. Higher weed biodiversity is associated with lower dominance of competitive weed species that reduce crop yield. The second approach relies on modern tools such as robots and biotechnology to manipulate the density of specific weed species. This approach can remove highly problematic species and minimize niche overlap between the weeds and crops. Given the complexity of interactions among crops, weeds, and other components of the agroecosystem, we highlight the need for multidisciplinary research to illuminate mechanisms that determine the neutrality of weed communities.

Food partitioning among coexisting species is often considered advantageous to minimize niche overlap and avoid inter-specific competition. Congeneric fish species such as the mullets Mugil curema and Mugil liza, which co-occur across marine and estuarine habitats, are good models to evaluate resource use and niche overlap or partitioning. We used stomach contents (SCA) and stable isotope analysis (SIA) to assess potential trophic shifts and changes in niche overlap associated with the mullets transitioning from marine to estuarine habitats. SIA included different fractions of organic matter in suspension and in the sediment to estimate the contribution of micro, nano and pico-organisms to the mullets’ diets. We hypothesized higher resource partitioning in the less resource-diverse system (marine surf-zone) than in the more diverse one (estuary). SCA showed diet differences between M. curema and M. liza according to the habitat. They showed distinct diets in the marine area (P < 0.001), but similar diets in the estuary (P = 0.226). A lower niche breadth was observed for both species in the marine area (M. curema = 0.03, M. liza = 0.06) compared with the estuary (M. curema = 0.14, M. liza = 0.16). Isotopic niches of both species were higher in the estuary (64.7%) compared with the marine area (0.7%). These findings corroborated our hypothesis of higher food partitioning in the marine surf-zone. We also demonstrated using SIA the shift from planktonic to benthic feeding following the recruitment of the mullets from the surf-zone into the estuary.

Syntopic species with similar anatomic configuration may face strong competition for trophic resources, thus relying on developed mechanisms to ensure coexistence. The present study investigated the influence of body size on trophic interactions between juveniles of two closely related fish species at three sandy beaches in south-eastern Brazil. A total of 150 fish were sampled, where 103 were identified as Trachinotus carolinus (mean ± SE: weight = 9 g ± 1.13) and 47 as Trachinotus goodei (weight = 46.7 g ± 3.34). A significant size-difference between juvenile Trachinotus was detected by a null-model analysis (P = 0.04), with T. carolinus (TL = 79.6 mm ± 2.4) presenting a smaller body size than T. goodei (TL = 147.7 mm ± 4.2). The main prey items consumed by T. carolinus were Perna perna (IAi = 0.76) and Emerita brasiliensis (IAi = 0.18), whereas the latter was the major T. goodei dietary prey (IAi = 0.71). Both prey were correlated with larger-sized juveniles of each pompano species, whereas smaller fish shared non-preferred trophic items. Such opportunistic behaviour of smaller juveniles may account for the dietary overlap detected between the Trachinotus species (P = 0.09). Size-related dietary partitioning was observed for the largest T. goodei juveniles, which displayed only a slight overlap with T. carolinus, and between juveniles belonging to the small and medium size groups of each pompano species. Therefore, food partitioning related to pompano body size seems to be especially important for the smallest juveniles, as they present the highest vacuity (particularly T. carolinus) in the sampled beaches, suggesting that these individuals are under intra- and interspecific competitive pressure, which may affect local coexistence.

We studied the food and habitat preferences of beetles of the subfamily Scarabaeinae in a protected tropical monsoon forest, the Wasgomuwa National Park in Sri Lanka. While gaining an insight into the capacity of different resources to support dung beetles, we tested the hypothesis that, in a landscape with a mosaic of habitat types and a diversity of large mammals, specialization facilitates coexistence of the scarabs. Pitfall traps were laid in five distinct habitat types (forest, riverine, sandy banks, scrub and grassland), and baited with five dung types (leopard, cervid, elephant, bear and buffalo). Four hundred and fifty seven beetles of 22 species in seven genera were recorded. Significant differences were seen in the species richness and abundance of dung beetles between different habitats and dung types, indicating habitat and food preferences. The highest richness of scarabs was in the riverine habitat and in leopard dung. Niche breath values of the individual species indicated differences in the degrees of specialization, while niche overlap values indicated a greater sharing of dung beetle species between similar habitats and dung types than between dissimilar ones. These findings provide evidence that selectivity of habitat, and dung, may be important in promoting coexistence among the scarabs in a tropical environment.

We assessed the differences and similarities in diel activities among five phytophagous bat species at two habitats over two seasons within the Sierra del Rosario Biosphere Reserve in Cuba. We characterized temporal patterns of activity and overlap of temporal activity for frugivore and nectarivore bat species (Artibeus jamaicensis, Monophyllus redmani, Phyllonycteris poeyi, Phyllops falcatus and Brachyphylla nana) that occur in tropical evergreen forest sites with distinct altitude and vegetation structure during wet and dry seasons. Capture frequencies using mist-nets of 1180 capture events were the empirical basis for analyses. For each species we compared activity patterns between habitats, between seasons, between males and females, as well as between reproductive and non-reproductive females. We also assessed temporal overlap among each possible pair of species at each habitat and used Monte Carlo simulations to evaluate assemblage-wide temporal niche overlap using a new algorithm, termed Rosario, designed specifically for temporal data. The two habitats had the same species composition and bat diel rhythms tended to be consistent across habitats, seasons and sexes for most bat species. In general bat species pairwise temporal niche overlap was high, and the ensemble-wide temporal overlap was consistently high across habitats and seasons indicating a common constraint for bat activities. Activity peaks of most bat species coincided at 4–5 h after sunset, this being in sharp contrast to other Neotropical bat assemblages at continental sites where activity peaks usually overlap within the first 2 h after sunset. This strong disparity in timing of activity peaks between continental and insular bat assemblages can provide the framework for the generation of hypotheses that explain the potential role of time as a mediator of ecological interactions in bat assemblages.

A range of species eating the same fruit suggests that niche overlap can occur, along with potential competition among them. To test if the overlap in the coterie of fruit-eating birds is larger than would be expected by chance, we performed a comparison with coteries generated from the use of null models. The study was carried out in an area of savanna woodland of 127 ha in Uberlândia city, Brazil. Four individuals of five zoochorous plant species were selected and 60 h of focal observation was performed on each species. We recorded species of birds that consumed fruits and the quantity of fruit removed. We used an index of Proportional Similarity (PS) between each pair of plant species, using the relative proportion of fruit taken by each bird species of each plant. The mean value of observed PS was compared with the mean PS generated from randomizations. Thirty-six bird species were recorded eating fruits in the selected plant species. The mean overlap observed (PS = 0.183) was significantly higher (P = 0.032) than the mean overlap generated by the null models (PS = 0.123). This pattern suggests that competition is not an important factor in the formation of the coteries and there is sharing of resources. The abundance of fruits offered, especially in the rainy season, and the relatively low number of frugivorous species may be factors explaining the low influence of interactions and therefore the overlap between coteries.

The diets and trophic ecology of the dominant fish species from the marine coastal region of Aveiro (north-western Portugal) caught during a summer survey were studied. Mysids were the most important prey group for the fish assemblage analysed. As a consequence, there was a high dietary overlap between species and a low incidence of piscivory. Nevertheless, a clear segregation of trophic niches was observed, with one group (comprising the species Chelidonichthys cuculus, Callionymus lyra, Dicologlossa cuneata and Pomatoschistus lozanoi) showing a stronger preference for infaunal epibenthic prey, such as polychaetes and amphipods, another group (including Arnoglossus imperialis, Arnoglossus laterna, Chelidonichthys obscurus, Chelidonichthys lucernus, Echiichthys vipera, Pagellus acarne and Trisopterus luscus) preying mostly upon suprabenthic prey, mainly mysids, and a third group (Engraulis encrasicolus and Trachurus trachurus) feeding largely on planktonic prey like copepods. Some species, including A. imperialis, C. lyra, E. vipera, T. trachurus and T. luscus, showed ontogenic diet shifts that may be related to the habitat occupied by different size-classes and/or to their ability to capture prey of different size.

We tested the hypothesis that species of a diverse leaf-litter ant community are separated by the temperature preferences of their broods along a thermal gradient. Therefore, temperature preferences of brood-tending workers from 41 ant species co-occurring in four types (alluvial, limestone, kerangas and dipterocarp forest) of primary rain forest in Sarawak, Malaysia were measured in an experimental set-up. Preferred temperatures of species ranged from 16.0 °C to 31.7 °C, with the median at 25.8 °C. The ten commonest species (n ≥ 4) showed significantly different temperature preferences. In particular, species of the genus Pheidole differed clearly in their preferences over a broad range of temperatures. Temperature preferences varied significantly among ant assemblages from different forest types and nest sites. Experimentally obtained temperature preferences of species correlated significantly with vegetation density in the plots inhabited by the respective species, but not with plot canopy cover. When we tested the temperature preferences of all ant species with null models for niche overlap, we found a significant niche separation only among the tested species from the kerangas. Our results suggest that nest temperature is an important ecological factor for leaf-litter ants in rain forests on Borneo, but other factors may override its influence during community assembly.

Temporal niche partitioning can be a viable mechanism for coexistence, but has received less attention than other niche axes. We characterized and compared patterns of activity, and overlap of temporal activity among the five common rodent species from a tropical semideciduous forest (TSF) and between the two common rodent species from cloud forest (CF) at El Cielo Biosphere Reserve in Mexico. Capture frequencies over 2-h intervals, obtained via live trapping (6850 trap-nights) in chosen months over 3 y formed the empirical basis for analyses. Trap transects were set from 19h00 to 07h00 and checked every 2 h. Analyses of 484 captures evinced two distinct assemblages. The TSF assemblage was diverse and with non-random temporal niche segregation, whereas the CF assemblage was depauperate with its two dominant species evincing the same activity pattern. Predator avoidance between open- and closed-microhabitat species, as well as niche complementarity may explain temporal segregation at TSF. This is the first documentation of assemblage-wide non-random temporal segregation of neotropical rodents. Time of activity may be a largely under-appreciated mechanism in other species-rich tropical rodent assemblages as well as in other species-rich biotas.

The feeding habits of feral domestic cats Felis catus (n=264), wild cats Felis silvestris (n=22) and their hybrids (n=30) were investigated in Hungary. Cat groups were identified taxonomically by morphological and molecular methods. Diet components were identified in stomach contents and faeces collected from the recta. In each cat group, abundant small mammals were dominant in the diet (relative frequency of occurrence: feral domestic cat, 61–82%, depending on regions; wild cat, 70%; hybrid, 59%). Birds were the second most important quarry (2–7%, 16% and 20%, respectively in the three cat groups), while the contribution of hares (1–2%, 5% and 3%, respectively) and other taxa was not significant. Every cat group preyed on small-sized animals (<50 g; 89–96%, 80% and 80%, respectively), terrestrial (91–98%, 84% and 86%, respectively) and wild (71–73%, 87% and 77%, respectively) prey. Standardized trophic niche breadth was typically very narrow (BA=0.07–0.16, 0.13 and 0.17, respectively). Feral domestic cats occasionally consumed household food (2–7%) and domestic animals (4–8%). This could mean that feral domestic cats have an advantage over wild cats that are food specialists. The trophic niche overlap between cat groups was high (77–88%). Food composition and feeding habits, (weight, zonation and environmental association of consumed prey) of feral domestic cats, however, was different compared to wild cats, which indicated the possibility of partial resource partitioning. The values for hybrids were between the two groups. As well as the stable presence of feral domestic cats (mean population density, D=1.34 individuals/1000 ha) based on field live-trapping, hybrids are also present (D=0.10), leading to continuous hybridization. This can threaten the population of wild cats, which are present at a low density (D=0.17).

The Iberian Peninsula comprises two distinct biogeographic areas: a temperate Atlantic Eurosiberian (north) and a Mediterranean (centre and south), and they provide very different biotopes, landscapes and prey for carnivores. One example is an abundance of the wild rabbit Orytolagus cuniculus in the Mediterranean zone, which contrasts with the Eurosiberian zone, where the rabbit is scarce. The feeding resource partitioning among four sympatric predators (red fox Vulpes vulpes, wild cat Felis silvestris, genet Genetta genetta and stone marten Martes foina) was analysed in the Peneda-Gerês National Park (north-west Portugal), located in the Eurosiberian region. Data on the spatial distribution of three important prey species (Apodemus sylvaticus, Microtus lusitanicus and Talpa occidentalis) were also collected to investigate their possible relationships with the feeding habits of each predator. Rodents are the staple prey for this guild of carnivores. Predators are able to supplement their diets with one or two secondary prey types: rabbits and arthropods by the largest carnivores (the red fox and the wild cat); insectivores by the small predators (the genet and the stone marten). These results contrast with the characteristic Mediterranean predator–prey features, where rabbits are the main support of carnivore communities. The feeding resource partitioning revealed a complex structure characterized by a dynamic niche differentiation and overlap, according to a seasonal pattern. To explain this pattern of resource exploitation two hypotheses are discussed in the light of the body size of predators and their use of space.

Dynamics of a rodent community were studied in the Negev Desert Highlands (Israel) during 8 years on 24 permanent 1-ha plots representing six main habitat types. Based on theoretical models of habitat selection, we hypothesized that niche overlap between species of the same spatial guild should increase with density faster than that between species of different guilds. Data were analysed using multivariate (principal component and discriminant) analyses to test the hypothesis. Density changes in most rodent species followed fluctuations in the amount of rainfall. Habitat niche breadth was density-dependent in six species and density-independent in four species. Significant habitat shifts and switches of spatial guild membership were found in three of 10 species. Pairwise values of habitat overlap were significantly and positively correlated with density only in species pairs where both species demonstrated density-dependent variation of habitat breadth. In most other pairs of species, overlap values were density-independent. Comparison of changes in average within-season values of habitat overlap with density within and among spatial guilds directly supported our hypothesis demonstrating faster increase of niche overlap with density between species of the same spatial guild than between species of different guilds.

An analysis of 273 samples taken at the filter screens of an estuarine power plant cooling water intake showed that herring and sprat were boldly associated with each other and formed mixed species schools. Herring-dominated schools were typically larger, more frequent and contained larger-sized individuals than schools dominated by sprat. The mean body length of both herring and sprat was biased as a function of their relative importance in the school suggesting that the fish schools were assorted by size. However, switching to a fish school dominated by the other species increased the individual body length variation relative to the group average. Diets of both species overlapped boldly but the feeding rate of sprat was significantly lower than that of herring. Our results suggest that during estuarine residency young sprat suffer the consequences of the school trap, possibly to profit from reduced predation risks in herring schools.

Five Monogenea species were found on the gills of the catfish Pimelodus maculatus in Río de la Plata (Argentina). These were used for studying the preference of species on different gill-hemibranches, niche breadth and niche overlap between species. It was found that congeneric species had a generic-specific preference for certain gill-hemibranches. Niche breadth appeared to be related to the number of individuals of each species. Niche overlap between the species is discussed.

Diets of red Cervus elaphus and roe Capreolus capreolus deer in Scottish plantation forests were assessed by botanical and chemical analyses of 144 rumen samples. Samples were taken for summer and winter from four forests with a range of deer densities and ratios. Red deer ate mainly grasses in summer, and a mixture of sedges, rushes, grasses and heaths (ericoid plants) in winter. Roe deer ate predominantly forbs (herbaceous plants other than graminoids) in summer, and a mixture of forbs, heaths and tree and shrub browse in winter. The two species ate significantly different quantities of forbs and grasses (P < 0.001). Both species ate more grasses and forbs in summer, and more heaths in winter (P < 0.05). There were few differences between forests for either red or roe deer in diet composition or its seasonal variation. Washed rumen contents of roe deer contained more nitrogen than did those of red deer (P < 0.05) in both seasons, and both species contained more nitrogen in summer than in winter (P < 0.05). Proportions of the main plant categories within rumens were compared with their abundance recorded in the ground flora. These comparisons showed roe deer to be highly selective, whilst red deer ate plants in proportions similar to their availability. Niche overlap increased and dietary niche breadths widened during the winter. The main overlap was for heaths Calluna vulgaris and Vaccinium myrtillus in winter. However, C. vulgaris is widespread and common and competition was considered to be more likely for forbs and possibly V. myrtillus: the use of some forb species by red deer in summer may limit their availability to roe deer in winter, when they remain an important dietary item. Consideration of the different digestive specializations of the two species suggested that any dietary competition is likely to affect roe deer more than red deer.