Diatom assemblages in lake sediments of Lac Noir, southwestern Québec, were studied at a resolution of 10 yr to determine principal drivers of primary producers for the past ~1000 yr. Generalized additive modeling revealed strong links between broadscale climate intervals of the late Holocene, forest composition, and diatom flora. During the Medieval Warm Period (~AD 1200) and onset of the Little Ice Age (~AD 1450), increases in Tabellaria flocculosa str. IIIp at the expense of Discostella stelligera reflected low lake productivity. At AD 1630, an abrupt shift to cooler temperatures and dry conditions triggered a decline in hemlock (Tsuga), replaced by disturbance and cool-adapted taxa. Greater nutrient availability and soil erosion in the catchment led to a corresponding and rapid increase in diatoms with higher optima for nitrogen, such as Asterionella formosa and Fragilaria crotonensis. After AD 1870, an increase in pollen of taxa associated with disturbances signaled the arrival of Euro-Canadians, and associated nutrient inputs to the lake triggered increases in Stephanodiscus minutulus and Achnanthidium minutissimum. Overall results of the study indicate that climate played an important underlying role in lake-ecosystem dynamics; however, disturbances affecting forest composition had more direct influences on the diatom communities of Lac Noir.