This study analysed the epidemiological characteristics of imported cases of acute infectious diseases and compared these features by nationality in 25 border counties of Yunnan Province from 2008 to 2017 to inform prevention strategies. Surveillance data for the imported cases collected in the border counties were analysed to determine disease variety, seasonal patterns, infection site and personal demographics and these features were compared by patient nationality. A total of 12 820 imported cases were reported in the 25 border counties, with 5610 foreign cases and 7210 native cases. The disease spectrum was more diverse among foreign cases than among native cases. Both foreign and native cases were mostly imported from Myanmar. The shift in the number of foreign cases was greater than that of native cases after 2016. Ruili, a city, that shares a border with Myanmar, exhibited the greatest number of imported infections. Farmers, businessmen, women and preschool children were frequently diagnosed with infections. Multiple prevention strategies including disease screening at the border, health education before departure and health service provision to foreigners should be carried out to reduce the risk of autochthonous spreading and to avoid potential outbreaks. Furthermore, international collaboration in terms of sharing infectious disease data should be improved between China and neighbouring countries.