SerialEM: A Program for Automated Tilt Series Acquisition on Tecnai Microscopes Using Prediction of Specimen Position

David N. Mastronarde

doi:10.1017/S1431927603445911

Abstract

An abstract is not available for this content so a preview has been provided. As you have access to this content, a full PDF is available via the ‘Save PDF’ action button.

Image of the first page of this content. For PDF version, please use the ‘Save PDF’ preceeding this image.'

Crossref Citations

This article has been cited by the following publications. This list is generated based on data provided by Crossref.

Marsh, Brad J. Volkmann, Niels McIntosh, J. Richard and Howell, Kathryn E. 2004. Direct continuities between cisternae at different levels of the Golgi complex in glucose-stimulated mouse islet beta cells. Proceedings of the National Academy of Sciences, Vol. 101, Issue. 15, p. 5565.

Marsh, Brad J. 2005. Lessons from tomographic studies of the mammalian Golgi. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, Vol. 1744, Issue. 3, p. 273.

Mastronarde, David N. 2005. Automated electron microscope tomography using robust prediction of specimen movements. Journal of Structural Biology, Vol. 152, Issue. 1, p. 36.

Pantelic, Radosav S. Rothnagel, Rosalba Huang, Chang-Yi Muller, David Woolford, David Landsberg, Michael J. McDowall, Alasdair Pailthorpe, Bernard Young, Paul R. Banks, Jasmine Hankamer, Ben and Ericksson, Geoffery 2006. The discriminative bilateral filter: An enhanced denoising filter for electron microscopy data. Journal of Structural Biology, Vol. 155, Issue. 3, p. 395.

Kim, Min Jun McNally, Ben Murata, Kazuyoshi and Meller, Amit 2007. Characteristics of solid-state nanometre pores fabricated using a transmission electron microscope. Nanotechnology, Vol. 18, Issue. 20, p. 205302.

Noske, Andrew B. Costin, Adam J. Morgan, Garry P. and Marsh, Brad J. 2008. Expedited approaches to whole cell electron tomography and organelle mark-up in situ in high-pressure frozen pancreatic islets. Journal of Structural Biology, Vol. 161, Issue. 3, p. 298.

Richter, Tobias Floetenmeyer, Matthias Ferguson, Charles Galea, Janette Goh, Jaclyn Lindsay, Margaret R. Morgan, Garry P. Marsh, Brad J. and Parton, Robert G. 2008. High‐Resolution 3D Quantitative Analysis of Caveolar Ultrastructure and Caveola–Cytoskeleton Interactions. Traffic, Vol. 9, Issue. 6, p. 893.

Radhakrishnan, Anuradha Yeo, Dawn Brown, Gaie Myaing, Myint Zu Iyer, Laxmi Ravi Fleck, Roland Tan, Boon-Huan Aitken, Jim Sanmun, Duangmanee Tang, Kai Yarwood, Andy Brink, Jacob and Sugrue, Richard J. 2010. Protein Analysis of Purified Respiratory Syncytial Virus Particles Reveals an Important Role for Heat Shock Protein 90 in Virus Particle Assembly. Molecular & Cellular Proteomics, Vol. 9, Issue. 9, p. 1829.

Korinek, Andreas Beck, Florian Baumeister, Wolfgang Nickell, Stephan and Plitzko, Jürgen M. 2011. Computer controlled cryo-electron microscopy – TOM2 a software package for high-throughput applications. Journal of Structural Biology, Vol. 175, Issue. 3, p. 394.

Orlova, E. V. and Saibil, H. R. 2011. Structural Analysis of Macromolecular Assemblies by Electron Microscopy. Chemical Reviews, Vol. 111, Issue. 12, p. 7710.

Kourkoutis, Lena Fitting Plitzko, Jürgen M. and Baumeister, Wolfgang 2012. Electron Microscopy of Biological Materials at the Nanometer Scale. Annual Review of Materials Research, Vol. 42, Issue. 1, p. 33.

Fauerbach, Jonathan A. Yushchenko, Dmytro A. Shahmoradian, Sarah H. Chiu, Wah Jovin, Thomas M. and Jares-Erijman, Elizabeth A. 2012. Supramolecular Non-Amyloid Intermediates in the Early Stages of α-Synuclein Aggregation. Biophysical Journal, Vol. 102, Issue. 5, p. 1127.

Storrie, Brian Micaroni, Massimo Morgan, Garry P. Jones, Nick Kamykowski, Jeffrey A. Wilkins, Ngozi Pan, Timothy H. and Marsh, Brad J. 2012. Electron Tomography Reveals Rab6 Is Essential to the Trafficking of trans‐Golgi Clathrin and COPI‐Coated Vesicles and the Maintenance of Golgi Cisternal Number. Traffic, Vol. 13, Issue. 5, p. 727.

Paredes, A.M. 2014. Encyclopedia of Food Microbiology. p. 711.

Bullen, Anwen West, Timothy Moores, Carolyn Ashmore, Jonathan Fleck, Roland A. MacLellan-Gibson, Kirsty and Forge, Andrew 2015. Association of intracellular and synaptic organization in cochlear inner hair cells revealed by 3D electron microscopy. Journal of Cell Science,

Seguí-Simarro, Jose M. 2015. Plant Microtechniques and Protocols. p. 135.

Wheeler, Richard J Sunter, Jack D and Gull, Keith 2016. Flagellar pocket restructuring through theLeishmanialife cycle involves a discrete flagellum attachment zone. Journal of Cell Science,

Kotecha, Abhay Wang, Quan Dong, Xianchi Ilca, Serban L. Ondiviela, Marina Zihe, Rao Seago, Julian Charleston, Bryan Fry, Elizabeth E. Abrescia, Nicola G. A. Springer, Timothy A. Huiskonen, Juha T. and Stuart, David I. 2017. Rules of engagement between αvβ6 integrin and foot-and-mouth disease virus. Nature Communications, Vol. 8, Issue. 1,

Bertula, Kia Nonappa Myllymäki, Teemu T.T. Yang, Hongjun Zhu, X.X. and Ikkala, Olli 2017. Hierarchical self-assembly from nanometric micelles to colloidal spherical superstructures. Polymer, Vol. 126, Issue. , p. 177.

Wright, Addison V. Liu, Jun-Jie Knott, Gavin J. Doxzen, Kevin W. Nogales, Eva and Doudna, Jennifer A. 2017. Structures of the CRISPR genome integration complex. Science, Vol. 357, Issue. 6356, p. 1113.

Download full list

Article contents

SerialEM: A Program for Automated Tilt Series Acquisition on Tecnai Microscopes Using Prediction of Specimen Position

Abstract

Save article to Kindle

Save article to Dropbox

Save article to Google Drive

Reply to: Submit a response

Your details

You have entered the maximum number of contributors

Conflicting interests