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A molecular approach to identify prey of the southern rock lobster

Published online by Cambridge University Press:  28 April 2008

K.S. Redd*
Affiliation:
School of Zoology, University of Tasmania, Private Bag 5, Hobart, TAS 7001, Australia Tasmanian Aquaculture and Fisheries Institute, Marine Research Laboratories, University of Tasmania, Private Bag 49, Hobart, TAS 7001, Australia
S.N. Jarman
Affiliation:
Department of the Environment and Heritage, Australian Antarctic Division, 203 Channel Highway, Kingston, TAS 7050, Australia
S.D. Frusher
Affiliation:
Tasmanian Aquaculture and Fisheries Institute, Marine Research Laboratories, University of Tasmania, Private Bag 49, Hobart, TAS 7001, Australia
C.R. Johnson
Affiliation:
School of Zoology, University of Tasmania, Private Bag 5, Hobart, TAS 7001, Australia
*
*Author for correspondence Fax: (+61) 3 6226 2745 E-mail: [email protected]

Abstract

We demonstrate the use of molecular techniques to detect specific prey consumed by the southern rock lobster (Jasus edwardsii). A quick and non-lethal method was used to collect rock lobster faecal material and a molecular protocol was employed to isolate prey DNA from faecal samples. The isolated DNA was amplified using the polymerase chain reaction (PCR) with PCR primers designed to target specific prey items. Feeding experiments determined that DNA from black-lipped abalone (Haliotis rubra) and sea urchins (Centrostephanus rodgersii and Heliocidaris erythrogramma) can be detected in rock lobster faecal samples within seven hours and remains present for up to 60 h after ingestion.

Type
Research Paper
Copyright
Copyright © 2008 Cambridge University Press

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References

Agusti, N., Shayler, S., Harwood, J., Vaughan, I., Sunderland, K. & Symondson, W. (2003) Collembola as alternative prey sustaining spiders in arable ecosystems: prey detection within predators using molecular markers. Molecular Ecology 12, 34673475.Google Scholar
Barkai, A., Davis, C. & Tugwell, S. (1996) Prey selection by the South African cape rock lobster Jasus lalandii: Ecological and physiological approaches. Bulletin of Marine Science 58, 18.Google Scholar
Barrett, N., Edgar, G., Morton, A. & Buxton, C. (2003) A decade of study in Tasmanian MPAs-Part 2. Fishing Today 16, 2123.Google Scholar
Deagle, B., Jarman, S., Pemberton, D. & Gales, N. (2005a) Genetic Screening for Prey in the Gut Contents from a Giant Squid (Architeuthis sp.). Journal of Heredity 96, 417423.Google Scholar
Deagle, B., Tollit, D., Jarman, S., Hindell, M., Trites, A. & Gales, N. (2005b) Molecular scatology as a tool to study diet: analysis of prey DNA in scats from captive Steller sea lions. Molecular Ecology 14, 18311842.Google Scholar
Edgar, G. & Barrett, N. (1999) Effects of the declaration of marine reserves on Tasmanian reef fishes, invertebrates and plants. Journal of Experimental Marine Biology and Ecology 242, 107144.Google Scholar
Edgar, G., Moverley, J., Barrett, N., Peters, D. & Reed, C. (1997) The conservation-related benefits of a systematic marine biological sampling programme: The Tasmanian reef bioregionalisation as a case study. Biological Conservation 79, 227240.CrossRefGoogle Scholar
Elliott, N.G., Bartlett, J., Evans, B., Officer, R. & Haddon, M. (2002) Application of molecular genetics to the Australian abalone fisheries: forensic protocols for species identification and blacklip stock structure. pp. 1224in CSIRO Marine Research, and Fisheries Research and Development Corporation, Hobart, Tasmania.Google Scholar
Ennis, G. (1973) Food, feeding, and condition of lobsters, Homarus americanus, throughout the seasonal cycle in Bonavista Bay, Newfoundland. Journal of the Fisheries Research Board of Canada 30, 19051909.CrossRefGoogle Scholar
Farrell, E., Roman, J. & Sunquist, E. (2000) Dietary separation of sympatric carnivores identified by molecular analysis of scats. Molecular Ecology 9, 15831590.CrossRefGoogle ScholarPubMed
Fielder, D. (1965) The Spiny Lobster, Jasus lalandei (H. Milne Edwards), in South Australia: Food, Feeding, and Locomotor Activity. Australian Journal of Marine and Freshwater Research 16, 351367.CrossRefGoogle Scholar
Hickman, V. (1945) Notes on the Tasmanian Crayfish, Jasus lalandii (Milne Edwards). Papers and Proceedings of the Royal Society of Tasmania, 2738.CrossRefGoogle Scholar
Jarman, S. & Wilson, S. (2004) DNA-based species identification of krill consumed by whale sharks. Journal of Fish Biology 65, 586591.Google Scholar
Jarman, S., Gales, N., Tierney, M., Gill, P. & Elliott, N. (2002) A DNA-based method for identification of krill species and its application to analysing the diet of marine vertebrate predators. Molecular Ecology 11, 26792690.Google Scholar
Jarman, S., Deagle, B. & Gales, N. (2004) Group-specific polymerase chain reaction for DNA-based analysis of species diversity and identity in dietary samples. Molecular Ecology 13, 13131322.CrossRefGoogle ScholarPubMed
Jarman, S., Redd, K. & Giles, N. (2006) Group-specific primers for amplifying DNA sequences that identify Amphipoda, Cephalopoda, Echinodermata, Gastropoda, Isopoda, Ostracoda and Thoracica. Molecular Ecology Notes 6, 268271.CrossRefGoogle Scholar
Jernakoff, P., Phillips, B. & Fitzpatrick, J. (1993) The diet of post-puerulus western rock lobster, Panulirus cygnus George, at Seven Mile Beach, Western Australia. Australian Journal of Marine and Freshwater Research 44, 649655.Google Scholar
Joll, L. & Phillips, B. (1984) Natural diet and growth of juvenile western rock lobsters Panulirus cygnus George. Journal of Experimental Marine Biology and Ecology 75, 145169.Google Scholar
Juen, A. & Traugott, M. (2005) Detecting predation and scavenging by DNA gut-content analysis: a case study using a soil insect predator-prey system. Oecologia 142, 344352.Google Scholar
Kasper, M., Reeson, A., Cooper, S., Perry, K. & Austin, A. (2004) Assessment of prey overlap between a native (Polistes humilis) and an introduced (Vespula germanica) social wasp using morphology and phylogenetic analysis of 16s rDNA. Molecular Ecology 13, 20372049.Google Scholar
Mayfield, S. & Branch, G. (2000) Interrelations among rock lobsters, sea urchins, and juvenile abalone: implications for community management. Canadian Journal of Fisheries and Aquatic Sciences 57, 21752185.CrossRefGoogle Scholar
Mayfield, S., Atkinson, L., Branch, G. & Cockcroft, A. (2000a) Diet of the west coast rock lobster Jasus lalandii: Influence of lobster size, sex, capture depth, latitude and moult stage. South African Journal of Marine Science 22, 5769.Google Scholar
Mayfield, S., Branch, G. & Cockcroft, A. (2000b) Relationships among diet, growth rate, and food availability for the South African rock lobster, Jasus lalandii (Decapoda, Palinuridea). Crustaceana 73, 815834.Google Scholar
Mayfield, S., Lopata, A. & Branch, G. (2000c) Limitation and failure of immunological technique (ELISA) in resolving the diet of the South African rock lobster Jasus lalandii. Marine Biology 137, 595604.Google Scholar
Nejstgaard, J., Frischer, M., Raule, C., Gruebel, R., Kohlberg, K. & Verity, P. (2003) Molecular detection of algal prey in copepod guts and fecal pellets. Limnology and Oceanography: Methods 1, 2938.Google Scholar
Parsons, K., Piertney, S., Middlemas, S., Hammond, P. & Armstrong, J. (2005) DNA-based identification of salmonid prey species in seal faeces. Journal of Zoology 266, 275281.Google Scholar
Rosel, P. & Kocher, T. (2002) DNA-based identification of larval cod in stomach contents of predatory fishes. Journal of Experimental Marine Biology and Ecology 267, 7588.CrossRefGoogle Scholar
Shears, N. & Babcock, R. (2003) Continuing trophic cascade effects after 25 years of no-take marine reserve protection. Marine Ecology Progress Series 246, 116.Google Scholar
Sheppard, S. & Harwood, J. (2005) Advances in molecular ecology: tracking trophic links through predator–prey food-webs. Functional Ecology 19, 751762.CrossRefGoogle Scholar
Sheppard, S., Henneman, J., Memmott, J. & Symondson, W. (2004) Infiltration by alien predators into invertebrate food webs in Hawaii: a molecular approach. Molecular Ecology 13, 20772089.Google Scholar
Symondson, W. (2002) Molecular identification of prey in predator diets. Molecular Ecology 11, 627641.CrossRefGoogle ScholarPubMed
Tarr, R., Williams, P. & MacKenzie, A. (1996) Abalone, sea urchins and rock lobster: A possible ecological shift that may affect traditional fisheries. South African Journal of Marine Science 17, 319323.Google Scholar
Vestheim, H., Edvardsen, B. & Kaartvedt, S. (2005) Assessing feeding of a carnivorous copepod using species-specific PCR. Marine Biology 147, 381385.Google Scholar
Ward, T., Heinemann, D. & Evans, N. (2001) The role of marine reserves as fisheries management tools: a review of concepts, evidence and international experience. Final Report November 2000. 192 pp. in B.o.R. Sciences (Ed.) Canberra, Australia, Department of Agriculture, Fisheries and Forestry.Google Scholar
Williams, M. (1981) Methods for Analysis of Natural Diet in Portunid Crabs (Crustacea: Decapoda: Portunidae). Journal of Experimental Marine Biology and Ecology 52, 103113.CrossRefGoogle Scholar